RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 GJA3Q9Y6H8 435 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 GAKO14976 1311 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 GPR75-ASB3A0A0A6YYF3 556 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 GNAT2P19087 354 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 DNM1Q05193 864 aaKnown RBP15.53■□□□□ 0.08
CHD1L-208ENST00000488864 RNF20Q5VTR2 975 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 CRNKL1Q9BZJ0 848 aaKnown RBP15.53■□□□□ 0.08
CHD1L-208ENST00000488864 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 MAST2Q6P0Q8 1798 aa15.53■□□□□ 0.08
CHD1L-208ENST00000488864 SHTN1A0MZ66 631 aa15.52■□□□□ 0.08
CHD1L-208ENST00000488864 RIOK3O14730 519 aaKnown RBP15.52■□□□□ 0.08
CHD1L-208ENST00000488864 FKBP1AP62942 108 aaKnown RBP15.52■□□□□ 0.08
CHD1L-208ENST00000488864 TGFBRAP1Q8WUH2 860 aa15.52■□□□□ 0.08
CHD1L-208ENST00000488864 FAM163AQ96GL9 167 aaPredicted RBP15.52■□□□□ 0.08
CHD1L-208ENST00000488864 JAKMIP1Q96N16 626 aaKnown RBP15.52■□□□□ 0.08
CHD1L-208ENST00000488864 SMC3Q9UQE7 1217 aa15.52■□□□□ 0.08
CHD1L-208ENST00000488864 ADAMTSL1Q8N6G6 1762 aa15.52■□□□□ 0.07
CHD1L-208ENST00000488864 ZNF541Q9H0D2 1346 aa15.52■□□□□ 0.07
CHD1L-208ENST00000488864 CYP2D7A0A087X1C5 515 aa15.52■□□□□ 0.07
CHD1L-208ENST00000488864 EVX2Q03828 476 aa15.52■□□□□ 0.07
CHD1L-208ENST00000488864 NACAP1Q9BZK3 213 aa15.52■□□□□ 0.07
CHD1L-208ENST00000488864 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
CHD1L-208ENST00000488864 FZD9O00144 591 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 USP5P45974 858 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 EIF6P56537 245 aaKnown RBP15.51■□□□□ 0.07
CHD1L-208ENST00000488864 RHBDL3P58872 404 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 PPP4CP60510 307 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 IMMTQ16891 758 aaKnown RBP15.51■□□□□ 0.07
CHD1L-208ENST00000488864 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
CHD1L-208ENST00000488864 STOX1Q6ZVD7 989 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 MAPKAPK5Q8IW41 473 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 TEX11Q8IYF3 940 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 GMLQ99445 158 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 DCP1AQ9NPI6 582 aaPredicted RBP15.51■□□□□ 0.07
CHD1L-208ENST00000488864 INCENPQ9NQS7 918 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 RNF181Q9P0P0 153 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 CTNNA3Q9UI47 895 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 MINDY4BA8MYZ0 360 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 ZNF213O14771 459 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
CHD1L-208ENST00000488864 CACNB3P54284 484 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 HHIPL2Q6UWX4 724 aa15.51■□□□□ 0.07
CHD1L-208ENST00000488864 CTDSPL2Q05D32 466 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 PICALMQ13492 652 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 CFAP100Q494V2 611 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 TMED8Q6PL24 325 aaPredicted RBP15.5■□□□□ 0.07
CHD1L-208ENST00000488864 CCDC83Q8IWF9 413 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 OGFOD1Q8N543 542 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 KCNB2Q92953 911 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 TCEANC2Q96MN5 208 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 MTMR6Q9Y217 621 aa15.5■□□□□ 0.07
CHD1L-208ENST00000488864 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.5■□□□□ 0.07
CHD1L-208ENST00000488864 USP17L12C9JPN9 530 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 USP17L21D6R901 530 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 IGSF3O75054 1194 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 GJB2P29033 226 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 TNIP1Q15025 636 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 NBPF3Q9H094 633 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 MCM9Q9NXL9 1143 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 SAP30BPQ9UHR5 308 aaKnown RBP15.49■□□□□ 0.07
CHD1L-208ENST00000488864 BAZ2AQ9UIF9 1905 aaKnown RBP15.49■□□□□ 0.07
CHD1L-208ENST00000488864 MYO3BQ8WXR4 1341 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 USP17L8P0C7I0 530 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 CDC42EP5Q6NZY7 148 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 PRMT6Q96LA8 375 aaPredicted RBP15.49■□□□□ 0.07
CHD1L-208ENST00000488864 ZDHHC15Q96MV8 337 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 SERPINA10Q9UK55 444 aa15.49■□□□□ 0.07
CHD1L-208ENST00000488864 E7EWF7 191 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 CYP2D6P10635 497 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 ALX1Q15699 326 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 C9orf131Q5VYM1 1079 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 PDCL2Q8N4E4 241 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 AGBL3Q8NEM8 1001 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 TDRD3Q9H7E2 651 aaKnown RBP15.48■□□□□ 0.07
CHD1L-208ENST00000488864 PSME4Q14997 1843 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 GMPSP49915 693 aaPredicted RBP15.48■□□□□ 0.07
CHD1L-208ENST00000488864 ST3GAL1Q11201 340 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 RBM26Q5T8P6 1007 aaKnown RBP15.48■□□□□ 0.07
CHD1L-208ENST00000488864 CTR9Q6PD62 1173 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 ATP8A2Q9NTI2 1148 aa15.48■□□□□ 0.07
CHD1L-208ENST00000488864 PLCG2P16885 1265 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 NFIAQ12857 509 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 DDX4Q9NQI0 724 aaKnown RBP15.47■□□□□ 0.07
CHD1L-208ENST00000488864 HDAC9Q9UKV0 1011 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 ATP6V1DQ9Y5K8 247 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 SBF1O95248 1867 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 EGFRP00533 1210 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 PTGS1P23219 599 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 U2AF2P26368 475 aaKnown RBP eCLIP15.47■□□□□ 0.073e-7■■■□□ 14.6
CHD1L-208ENST00000488864 CHST3Q7LGC8 479 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 ANKRD7Q92527 254 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 MKRN1Q9UHC7 482 aaKnown RBP15.47■□□□□ 0.07
CHD1L-208ENST00000488864 TACC3Q9Y6A5 838 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 FLT1P17948 1338 aa15.47■□□□□ 0.07
CHD1L-208ENST00000488864 CLRN2A0PK11 232 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms