RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 USP5P45974 858 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 RHBDL3P58872 404 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 DYNLL1P63167 89 aaKnown RBP13.34□□□□□ -0.27
NUP98-212ENST00000488828 NOGQ13253 232 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 ZSCAN25Q6NSZ9 544 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 JMYQ8N9B5 988 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 AIDAQ96BJ3 306 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 IDI2Q9BXS1 227 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 MYH2Q9UKX2 1941 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
NUP98-212ENST00000488828 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
NUP98-212ENST00000488828 NEFLP07196 543 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 PPP4CP60510 307 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 MAP2K1Q02750 393 aaPredicted RBP13.33□□□□□ -0.28
NUP98-212ENST00000488828 MAPKAPK5Q8IW41 473 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 SMC5Q8IY18 1101 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 ANKRD13AQ8IZ07 590 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 DDX4Q9NQI0 724 aaKnown RBP13.33□□□□□ -0.28
NUP98-212ENST00000488828 CSADQ9Y600 493 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.28
NUP98-212ENST00000488828 KIF23Q02241 960 aaPredicted RBP13.32□□□□□ -0.28
NUP98-212ENST00000488828 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 TMED8Q6PL24 325 aaPredicted RBP13.32□□□□□ -0.28
NUP98-212ENST00000488828 CHD1LQ86WJ1 897 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 CLMNQ96JQ2 1002 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 WRNIP1Q96S55 665 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 ZNF341Q9BYN7 854 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 ELP3Q9H9T3 547 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
NUP98-212ENST00000488828 AKAP11Q9UKA4 1901 aa13.31□□□□□ -0.28
NUP98-212ENST00000488828 DDTLA6NHG4 134 aaPredicted RBP13.31□□□□□ -0.28
NUP98-212ENST00000488828 SLC10A3P09131 477 aa13.31□□□□□ -0.28
NUP98-212ENST00000488828 NUCB1Q02818 461 aa13.31□□□□□ -0.28
NUP98-212ENST00000488828 MAP3K11Q16584 847 aa13.31□□□□□ -0.28
NUP98-212ENST00000488828 LRRFIP1Q32MZ4 808 aaKnown RBP13.31□□□□□ -0.28
NUP98-212ENST00000488828 RASAL3Q86YV0 1011 aa13.31□□□□□ -0.28
NUP98-212ENST00000488828 ZKSCAN4Q969J2 545 aaPredicted RBP13.31□□□□□ -0.28
NUP98-212ENST00000488828 SAP30BPQ9UHR5 308 aaKnown RBP13.31□□□□□ -0.28
NUP98-212ENST00000488828 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 UNCXA6NJT0 531 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 FAM155AB1AL88 458 aaPredicted RBP13.3□□□□□ -0.28
NUP98-212ENST00000488828 HSPA1AP0DMV8 641 aaKnown RBP13.3□□□□□ -0.28
NUP98-212ENST00000488828 HSPA1BP0DMV9 641 aaKnown RBP13.3□□□□□ -0.28
NUP98-212ENST00000488828 ADD2P35612 726 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 PDE1AP54750 535 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 SLC4A8Q2Y0W8 1093 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 SLFNL1Q499Z3 407 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
NUP98-212ENST00000488828 ZIC5Q96T25 663 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 CRNKL1Q9BZJ0 848 aaKnown RBP13.3□□□□□ -0.28
NUP98-212ENST00000488828 OSBPL5Q9H0X9 879 aaPredicted RBP13.3□□□□□ -0.28
NUP98-212ENST00000488828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
NUP98-212ENST00000488828 AK9Q5TCS8 1911 aa13.3□□□□□ -0.28
NUP98-212ENST00000488828 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 VGLL4Q14135 290 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 SPRYD7Q5W111 196 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
NUP98-212ENST00000488828 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 PI4K2BQ8TCG2 481 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
NUP98-212ENST00000488828 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
NUP98-212ENST00000488828 SSC5DA1L4H1 1573 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 TCRBV5S4A2TA0A5A2 114 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
NUP98-212ENST00000488828 MBD4O95243 580 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
NUP98-212ENST00000488828 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 ZFYP08048 801 aaPredicted RBP13.28□□□□□ -0.28
NUP98-212ENST00000488828 INPP5BP32019 993 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.28□□□□□ -0.28
NUP98-212ENST00000488828 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 OPTNQ96CV9 577 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 WNK4Q96J92 1243 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 PICK1Q9NRD5 415 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 FLT1P17948 1338 aa13.28□□□□□ -0.28
NUP98-212ENST00000488828 RPAP1Q9BWH6 1393 aaPredicted RBP13.28□□□□□ -0.28
NUP98-212ENST00000488828 FAM196BA6NMK8 535 aa13.27□□□□□ -0.29
NUP98-212ENST00000488828 CHGBP05060 677 aa13.27□□□□□ -0.29
NUP98-212ENST00000488828 SLURP2P0DP57 97 aa13.27□□□□□ -0.29
NUP98-212ENST00000488828 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
NUP98-212ENST00000488828 LCORLQ8N3X6 602 aa13.27□□□□□ -0.29
NUP98-212ENST00000488828 KCNV2Q8TDN2 545 aa13.27□□□□□ -0.29
NUP98-212ENST00000488828 RIOK1Q9BRS2 568 aaKnown RBP13.27□□□□□ -0.29
NUP98-212ENST00000488828 TRPA1O75762 1119 aa13.26□□□□□ -0.29
NUP98-212ENST00000488828 APPP05067 770 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms