RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 SPP2Q13103 211 aa18.69■□□□□ 0.58
NELFA-215ENST00000488452 IRF5Q13568 498 aa18.69■□□□□ 0.58
NELFA-215ENST00000488452 TREML2Q5T2D2 321 aa18.69■□□□□ 0.58
NELFA-215ENST00000488452 COA7Q96BR5 231 aa18.69■□□□□ 0.58
NELFA-215ENST00000488452 TBC1D2Q9BYX2 928 aa18.69■□□□□ 0.58
NELFA-215ENST00000488452 LRP2BPQ9P2M1 347 aa18.69■□□□□ 0.58
NELFA-215ENST00000488452 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
NELFA-215ENST00000488452 ELNP15502 786 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 CAPN2P17655 700 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 CAP2P40123 477 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 MCAMP43121 646 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 TEX11Q8IYF3 940 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 ANKRD13CQ8N6S4 541 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 ZNF280CQ8ND82 737 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
NELFA-215ENST00000488452 PTPRFP10586 1907 aa18.68■□□□□ 0.58
NELFA-215ENST00000488452 COL2A1P02458 1487 aaPredicted RBP18.67■□□□□ 0.58
NELFA-215ENST00000488452 BCAR3O75815 825 aa18.67■□□□□ 0.58
NELFA-215ENST00000488452 INHAP05111 366 aa18.67■□□□□ 0.58
NELFA-215ENST00000488452 CHRDL2Q6WN34 429 aa18.67■□□□□ 0.58
NELFA-215ENST00000488452 TNNQ9UQP3 1299 aa18.67■□□□□ 0.58
NELFA-215ENST00000488452 USP17L5A8MUK1 530 aa18.66■□□□□ 0.58
NELFA-215ENST00000488452 FARP2O94887 1054 aaPredicted RBP18.66■□□□□ 0.58
NELFA-215ENST00000488452 GCLCP48506 637 aaPredicted RBP18.66■□□□□ 0.58
NELFA-215ENST00000488452 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.58
NELFA-215ENST00000488452 RRP1BQ14684 758 aaKnown RBP18.66■□□□□ 0.58
NELFA-215ENST00000488452 FAM110CQ1W6H9 321 aa18.66■□□□□ 0.58
NELFA-215ENST00000488452 SH3RF3Q8TEJ3 882 aaPredicted RBP18.66■□□□□ 0.58
NELFA-215ENST00000488452 CLUAP1Q96AJ1 413 aa18.66■□□□□ 0.58
NELFA-215ENST00000488452 NOL10Q9BSC4 688 aaKnown RBP18.66■□□□□ 0.58
NELFA-215ENST00000488452 HERC5Q9UII4 1024 aaKnown RBP18.66■□□□□ 0.58
NELFA-215ENST00000488452 NR2E3Q9Y5X4 410 aa18.66■□□□□ 0.58
NELFA-215ENST00000488452 BAG3O95817 575 aa18.65■□□□□ 0.58
NELFA-215ENST00000488452 TFRCP02786 760 aaKnown RBP18.65■□□□□ 0.58
NELFA-215ENST00000488452 HMGCS2P54868 508 aa18.65■□□□□ 0.58
NELFA-215ENST00000488452 DHX36Q9H2U1 1008 aaKnown RBP18.65■□□□□ 0.58
NELFA-215ENST00000488452 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
NELFA-215ENST00000488452 GPR108Q9NPR9 543 aa18.65■□□□□ 0.58
NELFA-215ENST00000488452 PI4KBQ9UBF8 816 aa18.65■□□□□ 0.58
NELFA-215ENST00000488452 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
NELFA-215ENST00000488452 SH3D19Q5HYK7 790 aa18.64■□□□□ 0.57
NELFA-215ENST00000488452 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.57
NELFA-215ENST00000488452 TTC39AQ5SRH9 613 aa18.64■□□□□ 0.57
NELFA-215ENST00000488452 NAA16Q6N069 864 aaPredicted RBP18.64■□□□□ 0.57
NELFA-215ENST00000488452 DEFB118Q96PH6 123 aa18.64■□□□□ 0.57
NELFA-215ENST00000488452 SNRKQ9NRH2 765 aa18.64■□□□□ 0.57
NELFA-215ENST00000488452 AATFQ9NY61 560 aaKnown RBP eCLIP18.64■□□□□ 0.57
NELFA-215ENST00000488452 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
NELFA-215ENST00000488452 PLCG2P16885 1265 aa18.63■□□□□ 0.57
NELFA-215ENST00000488452 PPP4CP60510 307 aa18.63■□□□□ 0.57
NELFA-215ENST00000488452 POLA2Q14181 598 aa18.63■□□□□ 0.57
NELFA-215ENST00000488452 TNNI3KQ59H18 835 aa18.63■□□□□ 0.57
NELFA-215ENST00000488452 ASCC2Q9H1I8 757 aaPredicted RBP18.63■□□□□ 0.57
NELFA-215ENST00000488452 PAK6Q9NQU5 681 aaPredicted RBP18.63■□□□□ 0.57
NELFA-215ENST00000488452 FPGT-TNNI3KV9GXZ4 949 aa18.63■□□□□ 0.57
NELFA-215ENST00000488452 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
NELFA-215ENST00000488452 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
NELFA-215ENST00000488452 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
NELFA-215ENST00000488452 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
NELFA-215ENST00000488452 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
NELFA-215ENST00000488452 DBNDD2Q9BQY9 259 aa18.62■□□□□ 0.57
NELFA-215ENST00000488452 WDR18Q9BV38 432 aa18.62■□□□□ 0.57
NELFA-215ENST00000488452 CRISPLD2Q9H0B8 497 aa18.62■□□□□ 0.57
NELFA-215ENST00000488452 CEP290O15078 2479 aa18.61■□□□□ 0.57
NELFA-215ENST00000488452 IGSF3O75054 1194 aa18.61■□□□□ 0.57
NELFA-215ENST00000488452 BACE1P56817 501 aa18.61■□□□□ 0.57
NELFA-215ENST00000488452 OS9Q13438 667 aaPredicted RBP18.61■□□□□ 0.57
NELFA-215ENST00000488452 ZKSCAN2Q63HK3 967 aa18.61■□□□□ 0.57
NELFA-215ENST00000488452 MAPKAPK5Q8IW41 473 aa18.61■□□□□ 0.57
NELFA-215ENST00000488452 SSH3Q8TE77 659 aa18.61■□□□□ 0.57
NELFA-215ENST00000488452 ZNF512BQ96KM6 892 aaPredicted RBP18.61■□□□□ 0.57
NELFA-215ENST00000488452 GJD2Q9UKL4 321 aa18.61■□□□□ 0.57
NELFA-215ENST00000488452 EVI5O60447 810 aa18.6■□□□□ 0.57
NELFA-215ENST00000488452 CYP2E1P05181 493 aaPredicted RBP18.6■□□□□ 0.57
NELFA-215ENST00000488452 ASNSP08243 561 aa18.6■□□□□ 0.57
NELFA-215ENST00000488452 METTL16Q86W50 562 aaKnown RBP18.6■□□□□ 0.57
NELFA-215ENST00000488452 PRO3102Q9H379 93 aa18.6■□□□□ 0.57
NELFA-215ENST00000488452 TMOD4Q9NZQ9 345 aa18.6■□□□□ 0.57
NELFA-215ENST00000488452 MORF4L1Q9UBU8 362 aa18.6■□□□□ 0.57
NELFA-215ENST00000488452 ATAD5Q96QE3 1844 aa18.6■□□□□ 0.57
NELFA-215ENST00000488452 LOC285556D6RIA3 1793 aa18.6■□□□□ 0.57
NELFA-215ENST00000488452 DOCK3Q8IZD9 2030 aa18.59■□□□□ 0.57
NELFA-215ENST00000488452 FLT1P17948 1338 aa18.59■□□□□ 0.57
NELFA-215ENST00000488452 C19orf81C9J6K1 198 aa18.59■□□□□ 0.57
NELFA-215ENST00000488452 SURF6O75683 361 aaKnown RBP18.59■□□□□ 0.57
NELFA-215ENST00000488452 HOXA7P31268 230 aaPredicted RBP18.59■□□□□ 0.57
NELFA-215ENST00000488452 MTMR2Q13614 643 aa18.59■□□□□ 0.57
NELFA-215ENST00000488452 ADGRA1Q86SQ6 560 aa18.59■□□□□ 0.57
NELFA-215ENST00000488452 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
NELFA-215ENST00000488452 P2RX7Q99572 595 aaKnown RBP18.59■□□□□ 0.57
NELFA-215ENST00000488452 TRIM34Q9BYJ4 488 aa18.59■□□□□ 0.57
NELFA-215ENST00000488452 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.59■□□□□ 0.579e-6■■□□□ 13.2
NELFA-215ENST00000488452 GINM1Q9NU53 330 aa18.59■□□□□ 0.57
NELFA-215ENST00000488452 HMGCRP04035 888 aa18.58■□□□□ 0.56
NELFA-215ENST00000488452 IRX3P78415 501 aaPredicted RBP18.58■□□□□ 0.56
NELFA-215ENST00000488452 JAG1P78504 1218 aa18.58■□□□□ 0.56
NELFA-215ENST00000488452 PAWRQ96IZ0 340 aaKnown RBP18.58■□□□□ 0.56
NELFA-215ENST00000488452 DNAJC18Q9H819 358 aa18.58■□□□□ 0.56
NELFA-215ENST00000488452 PALD1Q9ULE6 856 aa18.58■□□□□ 0.56
NELFA-215ENST00000488452 RPTORQ8N122 1335 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms