RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 OPTNQ96CV9 577 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 ELP3Q9H9T3 547 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
TOP3B-216ENST00000487485 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
TOP3B-216ENST00000487485 H0YGN5 161 aa12.88□□□□□ -0.35
TOP3B-216ENST00000487485 RNF113AO15541 343 aaKnown RBP12.88□□□□□ -0.35
TOP3B-216ENST00000487485 PPP4CP60510 307 aa12.88□□□□□ -0.35
TOP3B-216ENST00000487485 MIGA1Q8NAN2 632 aa12.88□□□□□ -0.35
TOP3B-216ENST00000487485 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
TOP3B-216ENST00000487485 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-216ENST00000487485 CACNB3P54284 484 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 RHBDL3P58872 404 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 DYNLL1P63167 89 aaKnown RBP12.87□□□□□ -0.35
TOP3B-216ENST00000487485 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 OTUD5Q96G74 571 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 TMOD2Q9NZR1 351 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 FOCADQ5VW36 1801 aa12.87□□□□□ -0.35
TOP3B-216ENST00000487485 LAMB1P07942 1786 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 A0A0C4DFX4 3053 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 PLCG2P16885 1265 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 SDSP20132 328 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 TAF1CQ15572 869 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-216ENST00000487485 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-216ENST00000487485 NBPF11Q86T75 865 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 TICAM2Q86XR7 235 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 FAM43AQ8N2R8 423 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-216ENST00000487485 RIOK1Q9BRS2 568 aaKnown RBP12.86□□□□□ -0.35
TOP3B-216ENST00000487485 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
TOP3B-216ENST00000487485 ZFYVE28Q9HCC9 887 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 CUL9Q8IWT3 2517 aa12.86□□□□□ -0.35
TOP3B-216ENST00000487485 CCL15-CCL14A0A0B4J2E2 113 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 TNNI2P48788 182 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 TNFAIP1Q13829 316 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 ARHGEF6Q15052 776 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 CCL15Q16663 113 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 FKBP1CQ5VVH2 108 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 SH3TC2Q8TF17 1288 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 APPBP2Q92624 585 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 OSBP2Q969R2 916 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 IDI2Q9BXS1 227 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 ARHGAP39Q9C0H5 1083 aa12.85□□□□□ -0.35
TOP3B-216ENST00000487485 WDHD1O75717 1129 aaPredicted RBP12.84□□□□□ -0.35
TOP3B-216ENST00000487485 MBD4O95243 580 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 TCP10Q12799 353 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 NFIAQ12857 509 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 PICALMQ13492 652 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 ZMYM1Q5SVZ6 1142 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 FAM83AQ86UY5 434 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 LCORLQ8N3X6 602 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 SEC62Q99442 399 aaKnown RBP12.84□□□□□ -0.35
TOP3B-216ENST00000487485 ARMT1Q9H993 441 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 MYH1P12882 1939 aa12.84□□□□□ -0.35
TOP3B-216ENST00000487485 RFX7Q2KHR2 1363 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 M0R2C6 588 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 HIP1O00291 1037 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 ENTPD3O75355 529 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 USP5P45974 858 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 GTF2A2P52657 109 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 VGLL4Q14135 290 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 BMP2KLQ5H9B9 411 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 FAM227BQ96M60 508 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 TMEM39BQ9GZU3 492 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
TOP3B-216ENST00000487485 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
TOP3B-216ENST00000487485 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
TOP3B-216ENST00000487485 ECM2O94769 699 aaPredicted RBP12.82□□□□□ -0.36
TOP3B-216ENST00000487485 NMIQ13287 307 aaPredicted RBP12.82□□□□□ -0.36
TOP3B-216ENST00000487485 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
TOP3B-216ENST00000487485 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
TOP3B-216ENST00000487485 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
TOP3B-216ENST00000487485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.82□□□□□ -0.36
TOP3B-216ENST00000487485 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
TOP3B-216ENST00000487485 CRNKL1Q9BZJ0 848 aaKnown RBP12.82□□□□□ -0.36
TOP3B-216ENST00000487485 DIAPH3Q9NSV4 1193 aa12.82□□□□□ -0.36
TOP3B-216ENST00000487485 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
TOP3B-216ENST00000487485 NAV1Q8NEY1 1877 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 A0A0D9SFI3 127 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 GPAA1O43292 621 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 PRKAB2O43741 272 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 TLR2O60603 784 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
TOP3B-216ENST00000487485 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 SDR42E1Q8WUS8 393 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms