RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PI16Q6UXB8 463 aa24.05■■□□□ 1.44
SMPDL3A-202ENST00000487215 OSBPL5Q9H0X9 879 aaPredicted RBP24.05■■□□□ 1.44
SMPDL3A-202ENST00000487215 EVI5O60447 810 aa24.04■■□□□ 1.44
SMPDL3A-202ENST00000487215 SPP2Q13103 211 aa24.04■■□□□ 1.44
SMPDL3A-202ENST00000487215 MTX1Q13505 466 aa24.04■■□□□ 1.44
SMPDL3A-202ENST00000487215 NSUN4Q96CB9 384 aaKnown RBP24.04■■□□□ 1.44
SMPDL3A-202ENST00000487215 CRISPLD2Q9H0B8 497 aa24.04■■□□□ 1.44
SMPDL3A-202ENST00000487215 COL2A1P02458 1487 aaPredicted RBP24.04■■□□□ 1.44
SMPDL3A-202ENST00000487215 LOC285556D6RIA3 1793 aa24.03■■□□□ 1.44
SMPDL3A-202ENST00000487215 GSTO1P78417 241 aa24.03■■□□□ 1.44
SMPDL3A-202ENST00000487215 TBC1D9Q6ZT07 1266 aa24.03■■□□□ 1.44
SMPDL3A-202ENST00000487215 ZNF280CQ8ND82 737 aa24.03■■□□□ 1.44
SMPDL3A-202ENST00000487215 NEUROD6Q96NK8 337 aa24.03■■□□□ 1.44
SMPDL3A-202ENST00000487215 MAP4K4O95819 1239 aaPredicted RBP24.02■■□□□ 1.44
SMPDL3A-202ENST00000487215 LDHCP07864 332 aa24.02■■□□□ 1.44
SMPDL3A-202ENST00000487215 GNAI3P08754 354 aa24.02■■□□□ 1.44
SMPDL3A-202ENST00000487215 RRP1BQ14684 758 aaKnown RBP24.02■■□□□ 1.44
SMPDL3A-202ENST00000487215 SPATA5Q8NB90 893 aa24.02■■□□□ 1.44
SMPDL3A-202ENST00000487215 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.02■■□□□ 1.44
SMPDL3A-202ENST00000487215 GCLCP48506 637 aaPredicted RBP24.01■■□□□ 1.43
SMPDL3A-202ENST00000487215 HMGCS2P54868 508 aa24.01■■□□□ 1.43
SMPDL3A-202ENST00000487215 PAWRQ96IZ0 340 aaKnown RBP24.01■■□□□ 1.43
SMPDL3A-202ENST00000487215 TBC1D2Q9BYX2 928 aa24.01■■□□□ 1.43
SMPDL3A-202ENST00000487215 A0A1W2PPC1 479 aa24■■□□□ 1.43
SMPDL3A-202ENST00000487215 CAP2P40123 477 aa24■■□□□ 1.43
SMPDL3A-202ENST00000487215 RARSP54136 660 aaKnown RBP24■■□□□ 1.43
SMPDL3A-202ENST00000487215 RAI14Q9P0K7 980 aa24■■□□□ 1.43
SMPDL3A-202ENST00000487215 ARID4AP29374 1257 aaPredicted RBP23.99■■□□□ 1.43
SMPDL3A-202ENST00000487215 PABPC4Q13310 644 aaKnown RBP eCLIP23.99■■□□□ 1.43
SMPDL3A-202ENST00000487215 GORABQ5T7V8 394 aa23.99■■□□□ 1.43
SMPDL3A-202ENST00000487215 TEX11Q8IYF3 940 aa23.99■■□□□ 1.43
SMPDL3A-202ENST00000487215 DIS3LQ8TF46 1054 aaKnown RBP23.99■■□□□ 1.43
SMPDL3A-202ENST00000487215 ARHGAP45Q92619 1136 aa23.99■■□□□ 1.43
SMPDL3A-202ENST00000487215 ASCC2Q9H1I8 757 aaPredicted RBP23.99■■□□□ 1.43
SMPDL3A-202ENST00000487215 ATAD5Q96QE3 1844 aa23.98■■□□□ 1.43
SMPDL3A-202ENST00000487215 USP17L5A8MUK1 530 aa23.98■■□□□ 1.43
SMPDL3A-202ENST00000487215 HMGCRP04035 888 aa23.98■■□□□ 1.43
SMPDL3A-202ENST00000487215 SH3D19Q5HYK7 790 aa23.98■■□□□ 1.43
SMPDL3A-202ENST00000487215 NECAB2Q7Z6G3 386 aa23.98■■□□□ 1.43
SMPDL3A-202ENST00000487215 STAP2Q9UGK3 403 aa23.98■■□□□ 1.43
SMPDL3A-202ENST00000487215 GJD2Q9UKL4 321 aa23.98■■□□□ 1.43
SMPDL3A-202ENST00000487215 MCAMP43121 646 aa23.97■■□□□ 1.43
SMPDL3A-202ENST00000487215 SH3RF3Q8TEJ3 882 aaPredicted RBP23.97■■□□□ 1.43
SMPDL3A-202ENST00000487215 HERC5Q9UII4 1024 aaKnown RBP23.97■■□□□ 1.43
SMPDL3A-202ENST00000487215 DOCK3Q8IZD9 2030 aa23.96■■□□□ 1.43
SMPDL3A-202ENST00000487215 SOX1O00570 391 aaPredicted RBP23.96■■□□□ 1.43
SMPDL3A-202ENST00000487215 TRIM32Q13049 653 aa23.96■■□□□ 1.43
SMPDL3A-202ENST00000487215 ANKLE1Q8NAG6 615 aa23.96■■□□□ 1.43
SMPDL3A-202ENST00000487215 AS3MTQ9HBK9 375 aa23.96■■□□□ 1.43
SMPDL3A-202ENST00000487215 ALPK3Q96L96 1907 aa23.96■■□□□ 1.43
SMPDL3A-202ENST00000487215 LRP2BPQ9P2M1 347 aa23.95■■□□□ 1.42
SMPDL3A-202ENST00000487215 MORF4L1Q9UBU8 362 aa23.95■■□□□ 1.42
SMPDL3A-202ENST00000487215 SIPA1L1O43166 1804 aa23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 RPTORQ8N122 1335 aa23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 UQCRFS1P1P0C7P4 283 aa23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 MTMR2Q13614 643 aa23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 LRCH3Q96II8 777 aa23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 WDR18Q9BV38 432 aa23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 HMX1Q9NP08 348 aaPredicted RBP23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 PI4KBQ9UBF8 816 aa23.94■■□□□ 1.42
SMPDL3A-202ENST00000487215 PNMA6EA0A0J9YXQ4 647 aa23.93■■□□□ 1.42
SMPDL3A-202ENST00000487215 GNAI2P04899 355 aa23.93■■□□□ 1.42
SMPDL3A-202ENST00000487215 G3BP1Q13283 466 aaKnown RBP eCLIP23.93■■□□□ 1.42
SMPDL3A-202ENST00000487215 C7orf61Q8IZ16 206 aa23.93■■□□□ 1.42
SMPDL3A-202ENST00000487215 NOL10Q9BSC4 688 aaKnown RBP23.93■■□□□ 1.42
SMPDL3A-202ENST00000487215 AATFQ9NY61 560 aaKnown RBP eCLIP23.93■■□□□ 1.42
SMPDL3A-202ENST00000487215 PLXNB2O15031 1838 aa23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 MNX1P50219 401 aaPredicted RBP23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 BACE1P56817 501 aa23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 IRX3P78415 501 aaPredicted RBP23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 JAG1P78504 1218 aa23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 TRIB2Q92519 343 aa23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 DHX36Q9H2U1 1008 aaKnown RBP23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 DNAJC18Q9H819 358 aa23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 TNNQ9UQP3 1299 aa23.92■■□□□ 1.42
SMPDL3A-202ENST00000487215 MAST2Q6P0Q8 1798 aa23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 ASNSP08243 561 aa23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 TRIM27P14373 513 aa23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 NAA16Q6N069 864 aaPredicted RBP23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 GDF15Q99988 308 aa23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 NBPF3Q9H094 633 aa23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 SNRKQ9NRH2 765 aa23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 TMOD4Q9NZQ9 345 aa23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 ZMYND8Q9ULU4 1186 aaPredicted RBP23.91■■□□□ 1.42
SMPDL3A-202ENST00000487215 PEX10O60683 326 aa23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 BAG3O95817 575 aa23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 CYP2B6P20813 491 aa23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 HOXA7P31268 230 aaPredicted RBP23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 SHROOM1Q2M3G4 852 aaPredicted RBP23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 MAPKAPK5Q8IW41 473 aa23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 TGFBRAP1Q8WUH2 860 aa23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 P2RX7Q99572 595 aaKnown RBP23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 TXNRD2Q9NNW7 524 aa23.9■■□□□ 1.42
SMPDL3A-202ENST00000487215 FLT1P17948 1338 aa23.89■■□□□ 1.42
SMPDL3A-202ENST00000487215 PLCG2P16885 1265 aa23.89■■□□□ 1.41
SMPDL3A-202ENST00000487215 BMP8BP34820 402 aa23.89■■□□□ 1.41
SMPDL3A-202ENST00000487215 PPP4CP60510 307 aa23.89■■□□□ 1.41
SMPDL3A-202ENST00000487215 MAP3K21Q5TCX8 1036 aa23.89■■□□□ 1.41
SMPDL3A-202ENST00000487215 ADGRA1Q86SQ6 560 aa23.89■■□□□ 1.41
SMPDL3A-202ENST00000487215 C11orf49Q9H6J7 331 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms