RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
NEK4-204ENST00000487068 ZKSCAN4Q969J2 545 aaPredicted RBP12.35□□□□□ -0.43
NEK4-204ENST00000487068 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
NEK4-204ENST00000487068 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
NEK4-204ENST00000487068 ATRNL1Q5VV63 1379 aa12.34□□□□□ -0.43
NEK4-204ENST00000487068 UNCXA6NJT0 531 aa12.34□□□□□ -0.43
NEK4-204ENST00000487068 FAM196BA6NMK8 535 aa12.34□□□□□ -0.43
NEK4-204ENST00000487068 GLRX3O76003 335 aaKnown RBP12.34□□□□□ -0.43
NEK4-204ENST00000487068 HLA-DOAP06340 250 aa12.34□□□□□ -0.43
NEK4-204ENST00000487068 INPP5BP32019 993 aa12.34□□□□□ -0.43
NEK4-204ENST00000487068 TMED8Q6PL24 325 aaPredicted RBP12.34□□□□□ -0.43
NEK4-204ENST00000487068 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.34□□□□□ -0.43
NEK4-204ENST00000487068 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
NEK4-204ENST00000487068 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
NEK4-204ENST00000487068 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
NEK4-204ENST00000487068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEK4-204ENST00000487068 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
NEK4-204ENST00000487068 MBD4O95243 580 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 ADD2P35612 726 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 PPP4CP60510 307 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 SH3BP5LQ7L8J4 393 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 FSD1Q9BTV5 496 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 SNCAIPQ9Y6H5 919 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
NEK4-204ENST00000487068 IGHDP01880 384 aa12.32□□□□□ -0.44
NEK4-204ENST00000487068 PKN2Q16513 984 aaKnown RBP12.32□□□□□ -0.44
NEK4-204ENST00000487068 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
NEK4-204ENST00000487068 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
NEK4-204ENST00000487068 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
NEK4-204ENST00000487068 DHX36Q9H2U1 1008 aaKnown RBP12.32□□□□□ -0.44
NEK4-204ENST00000487068 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
NEK4-204ENST00000487068 PALD1Q9ULE6 856 aa12.32□□□□□ -0.44
NEK4-204ENST00000487068 HPS5Q9UPZ3 1129 aa12.32□□□□□ -0.44
NEK4-204ENST00000487068 MYH4Q9Y623 1939 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 SPDYE5A6NIY4 337 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 SLURP2P0DP57 97 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 GJA5P36382 358 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 AMOTL1Q8IY63 956 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 LCORLQ8N3X6 602 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 PI4KBQ9UBF8 816 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 MGAMO43451 1857 aa12.31□□□□□ -0.44
NEK4-204ENST00000487068 CCL15-CCL14A0A0B4J2E2 113 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 TCRBV5S4A2TA0A5A2 114 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
NEK4-204ENST00000487068 GTF2A2P52657 109 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 CCL15Q16663 113 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 CHD1LQ86WJ1 897 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 SDR42E1Q8WUS8 393 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 RIOK1Q9BRS2 568 aaKnown RBP12.3□□□□□ -0.44
NEK4-204ENST00000487068 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
NEK4-204ENST00000487068 HERC5Q9UII4 1024 aaKnown RBP12.3□□□□□ -0.44
NEK4-204ENST00000487068 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 IRF6O14896 467 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 ALDH1A1P00352 501 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 CHGBP05060 677 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 NEFLP07196 543 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
NEK4-204ENST00000487068 PDE1AP54750 535 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 INHBEP58166 350 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 PPATQ06203 517 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 PPIL2Q13356 520 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 SNAPC2Q13487 334 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 UBE3CQ15386 1083 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 NOL9Q5SY16 702 aaKnown RBP12.29□□□□□ -0.44
NEK4-204ENST00000487068 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 ZNF296Q8WUU4 475 aaPredicted RBP12.29□□□□□ -0.44
NEK4-204ENST00000487068 SLC4A4Q9Y6R1 1079 aa12.29□□□□□ -0.44
NEK4-204ENST00000487068 ZSWIM8A7E2V4 1837 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 CTNND1O60716 968 aaKnown RBP12.28□□□□□ -0.44
NEK4-204ENST00000487068 GDF11O95390 407 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 TBC1D8O95759 1140 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 CETPP11597 493 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 NUCB1Q02818 461 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 APPBP2Q92624 585 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 RILPL2Q969X0 211 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.28□□□□□ -0.44
NEK4-204ENST00000487068 ZNF112Q9UJU3 913 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 SALL3Q9BXA9 1300 aa12.28□□□□□ -0.44
NEK4-204ENST00000487068 LAMA4Q16363 1823 aa12.27□□□□□ -0.44
NEK4-204ENST00000487068 TRIM75PA6NK02 468 aa12.27□□□□□ -0.45
NEK4-204ENST00000487068 PHF20L1A8MW92 1017 aa12.27□□□□□ -0.45
NEK4-204ENST00000487068 IGF2BP3O00425 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
NEK4-204ENST00000487068 RNF113AO15541 343 aaKnown RBP12.27□□□□□ -0.45
NEK4-204ENST00000487068 TBC1D12O60347 775 aa12.27□□□□□ -0.45
NEK4-204ENST00000487068 CENPBP07199 599 aaPredicted RBP12.27□□□□□ -0.45
NEK4-204ENST00000487068 TM4SF4P48230 202 aa12.27□□□□□ -0.45
NEK4-204ENST00000487068 TAF1CQ15572 869 aaPredicted RBP12.27□□□□□ -0.45
NEK4-204ENST00000487068 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.45
NEK4-204ENST00000487068 GADL1Q6ZQY3 521 aa12.27□□□□□ -0.45
NEK4-204ENST00000487068 CCDC84Q86UT8 332 aaPredicted RBP12.27□□□□□ -0.45
NEK4-204ENST00000487068 PUS7LQ9H0K6 701 aaKnown RBP12.27□□□□□ -0.45
NEK4-204ENST00000487068 SERPINB13Q9UIV8 391 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms