RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 SLURP2P0DP57 97 aa19.61■□□□□ 0.73
THBS3-207ENST00000486260 AKNAD1Q5T1N1 836 aa19.61■□□□□ 0.73
THBS3-207ENST00000486260 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
THBS3-207ENST00000486260 KIF2CQ99661 725 aa19.61■□□□□ 0.73
THBS3-207ENST00000486260 PI4KBQ9UBF8 816 aa19.61■□□□□ 0.73
THBS3-207ENST00000486260 CLEC11AQ9Y240 323 aa19.61■□□□□ 0.73
THBS3-207ENST00000486260 STAG1Q8WVM7 1258 aa19.6■□□□□ 0.73
THBS3-207ENST00000486260 TEPSINQ96N21 525 aa19.6■□□□□ 0.73
THBS3-207ENST00000486260 ROBO3Q96MS0 1386 aa19.6■□□□□ 0.73
THBS3-207ENST00000486260 SLC3A2P08195 630 aaKnown RBP19.6■□□□□ 0.73
THBS3-207ENST00000486260 PRAMEF18Q5VWM3 479 aa19.6■□□□□ 0.73
THBS3-207ENST00000486260 MFSD6Q6ZSS7 791 aa19.6■□□□□ 0.73
THBS3-207ENST00000486260 SLC44A5Q8NCS7 719 aa19.6■□□□□ 0.73
THBS3-207ENST00000486260 JAKMIP1Q96N16 626 aaKnown RBP19.6■□□□□ 0.73
THBS3-207ENST00000486260 SERPINB13Q9UIV8 391 aa19.6■□□□□ 0.73
THBS3-207ENST00000486260 NEDD4P46934 1319 aa19.59■□□□□ 0.73
THBS3-207ENST00000486260 GABPAQ06546 454 aa19.59■□□□□ 0.73
THBS3-207ENST00000486260 KRT32Q14532 448 aa19.59■□□□□ 0.73
THBS3-207ENST00000486260 SULF1Q8IWU6 871 aa19.59■□□□□ 0.73
THBS3-207ENST00000486260 EHD4Q9H223 541 aa19.59■□□□□ 0.73
THBS3-207ENST00000486260 SIPA1L1O43166 1804 aa19.59■□□□□ 0.73
THBS3-207ENST00000486260 FAM196BA6NMK8 535 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 ADM5C9JUS6 153 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 PRDM1O75626 825 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 PDE4BQ07343 736 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 COL9A3Q14050 684 aaPredicted RBP19.58■□□□□ 0.73
THBS3-207ENST00000486260 DLK2Q6UY11 383 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 C16orf86Q6ZW13 317 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 KRT26Q7Z3Y9 468 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 CRACR2BQ8N4Y2 399 aaPredicted RBP19.58■□□□□ 0.73
THBS3-207ENST00000486260 NKX2-3Q8TAU0 364 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 IL17RAQ96F46 866 aa19.58■□□□□ 0.73
THBS3-207ENST00000486260 RNF41Q9H4P4 317 aaPredicted RBP19.58■□□□□ 0.73
THBS3-207ENST00000486260 FGRP09769 529 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 CDK8P49336 464 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 RRP12Q5JTH9 1297 aaKnown RBP19.57■□□□□ 0.72
THBS3-207ENST00000486260 NBPF12Q5TAG4 269 aaPredicted RBP19.57■□□□□ 0.72
THBS3-207ENST00000486260 FOXP4Q8IVH2 680 aaPredicted RBP19.57■□□□□ 0.72
THBS3-207ENST00000486260 NEK1Q96PY6 1258 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 TOMM22Q9NS69 142 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
THBS3-207ENST00000486260 USP48Q86UV5 1035 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 DNAJC18Q9H819 358 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 MKNK2Q9HBH9 465 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 PPP2R3BQ9Y5P8 575 aa19.57■□□□□ 0.72
THBS3-207ENST00000486260 B4E1Z4 1266 aa19.56■□□□□ 0.72
THBS3-207ENST00000486260 PCP11498 1178 aaKnown RBP19.56■□□□□ 0.72
THBS3-207ENST00000486260 CPA1P15085 419 aa19.56■□□□□ 0.72
THBS3-207ENST00000486260 CASTP20810 708 aaKnown RBP19.56■□□□□ 0.72
THBS3-207ENST00000486260 TRDNQ13061 729 aa19.56■□□□□ 0.72
THBS3-207ENST00000486260 MAP1SQ66K74 1059 aaPredicted RBP19.56■□□□□ 0.72
THBS3-207ENST00000486260 MIGA2Q7L4E1 593 aa19.56■□□□□ 0.72
THBS3-207ENST00000486260 METTL16Q86W50 562 aaKnown RBP19.56■□□□□ 0.72
THBS3-207ENST00000486260 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
THBS3-207ENST00000486260 GLIS2Q9BZE0 524 aaPredicted RBP19.56■□□□□ 0.72
THBS3-207ENST00000486260 GPBP1L1Q9HC44 474 aaPredicted RBP19.56■□□□□ 0.72
THBS3-207ENST00000486260 TSHZ2Q9NRE2 1034 aa19.56■□□□□ 0.72
THBS3-207ENST00000486260 PSMA5P28066 241 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 RALYLQ86SE5 291 aaKnown RBP19.55■□□□□ 0.72
THBS3-207ENST00000486260 LDHDQ86WU2 507 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 UPF3BQ9BZI7 483 aaKnown RBP19.55■□□□□ 0.72
THBS3-207ENST00000486260 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 KRT23Q9C075 422 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 CNNM2Q9H8M5 875 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 SWAP70Q9UH65 585 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 ORC4O43929 436 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 SHMT1P34896 483 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 CDC37L1Q7L3B6 337 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.55■□□□□ 0.72
THBS3-207ENST00000486260 ZNF287Q9HBT7 754 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 ZSWIM6Q9HCJ5 1215 aa19.55■□□□□ 0.72
THBS3-207ENST00000486260 HERC5Q9UII4 1024 aaKnown RBP19.55■□□□□ 0.72
THBS3-207ENST00000486260 RANBP6O60518 1105 aaKnown RBP19.54■□□□□ 0.72
THBS3-207ENST00000486260 KDM4AO75164 1064 aa19.54■□□□□ 0.72
THBS3-207ENST00000486260 RASA1P20936 1047 aa19.54■□□□□ 0.72
THBS3-207ENST00000486260 BLOC1S2Q6QNY1 142 aa19.54■□□□□ 0.72
THBS3-207ENST00000486260 MB21D2Q8IYB1 491 aaPredicted RBP19.54■□□□□ 0.72
THBS3-207ENST00000486260 TBC1D12O60347 775 aa19.53■□□□□ 0.72
THBS3-207ENST00000486260 FAM47AQ5JRC9 791 aa19.53■□□□□ 0.72
THBS3-207ENST00000486260 CYB5R4Q7L1T6 521 aa19.53■□□□□ 0.72
THBS3-207ENST00000486260 CHST3Q7LGC8 479 aa19.53■□□□□ 0.72
THBS3-207ENST00000486260 ZNF444Q8N0Y2 327 aaPredicted RBP19.53■□□□□ 0.72
THBS3-207ENST00000486260 ESR2Q92731 530 aa19.53■□□□□ 0.72
THBS3-207ENST00000486260 ZSWIM5Q9P217 1185 aa19.53■□□□□ 0.72
THBS3-207ENST00000486260 HMGB1P09429 215 aaKnown RBP19.52■□□□□ 0.72
THBS3-207ENST00000486260 MAP3K10Q02779 954 aa19.52■□□□□ 0.72
THBS3-207ENST00000486260 RABEP1Q15276 862 aa19.52■□□□□ 0.72
THBS3-207ENST00000486260 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.72
THBS3-207ENST00000486260 RUFY3Q7L099 469 aa19.52■□□□□ 0.72
THBS3-207ENST00000486260 TCEANC2Q96MN5 208 aa19.52■□□□□ 0.72
THBS3-207ENST00000486260 CYP46A1Q9Y6A2 500 aa19.52■□□□□ 0.72
THBS3-207ENST00000486260 RPS6KB1P23443 525 aa19.52■□□□□ 0.71
THBS3-207ENST00000486260 NEK4P51957 841 aa19.52■□□□□ 0.71
THBS3-207ENST00000486260 TFAP4Q01664 338 aa19.52■□□□□ 0.71
THBS3-207ENST00000486260 SUPT20HL1Q3ZLR7 823 aa19.52■□□□□ 0.71
THBS3-207ENST00000486260 DHX32Q7L7V1 743 aaKnown RBP19.52■□□□□ 0.71
THBS3-207ENST00000486260 CDCA5Q96FF9 252 aa19.52■□□□□ 0.71
THBS3-207ENST00000486260 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.71
THBS3-207ENST00000486260 YY1P25490 414 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms