RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 PAK6Q9NQU5 681 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-226ENST00000486210 PICK1Q9NRD5 415 aa21.62■■□□□ 1.05
MCF2L-226ENST00000486210 A0A1W2PPC1 479 aa21.61■■□□□ 1.05
MCF2L-226ENST00000486210 TNPO2O14787 897 aaKnown RBP21.61■■□□□ 1.05
MCF2L-226ENST00000486210 EVI5O60447 810 aa21.61■■□□□ 1.05
MCF2L-226ENST00000486210 NEFLP07196 543 aa21.61■■□□□ 1.05
MCF2L-226ENST00000486210 CCDC84Q86UT8 332 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-226ENST00000486210 LRCH3Q96II8 777 aa21.61■■□□□ 1.05
MCF2L-226ENST00000486210 DDX4Q9NQI0 724 aaKnown RBP21.61■■□□□ 1.05
MCF2L-226ENST00000486210 TFRCP02786 760 aaKnown RBP21.6■■□□□ 1.05
MCF2L-226ENST00000486210 IL15P40933 162 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-226ENST00000486210 CRISPLD2Q9H0B8 497 aa21.6■■□□□ 1.05
MCF2L-226ENST00000486210 STAP2Q9UGK3 403 aa21.6■■□□□ 1.05
MCF2L-226ENST00000486210 DENND2AQ9ULE3 1009 aa21.6■■□□□ 1.05
MCF2L-226ENST00000486210 LOC285556D6RIA3 1793 aa21.6■■□□□ 1.05
MCF2L-226ENST00000486210 COL6A3P12111 3177 aa21.59■■□□□ 1.05
MCF2L-226ENST00000486210 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
MCF2L-226ENST00000486210 SEMA3EO15041 775 aa21.59■■□□□ 1.05
MCF2L-226ENST00000486210 ZBTB22O15209 634 aa21.59■■□□□ 1.05
MCF2L-226ENST00000486210 ATAD5Q96QE3 1844 aa21.58■■□□□ 1.05
MCF2L-226ENST00000486210 CTNND1O60716 968 aaKnown RBP21.58■■□□□ 1.05
MCF2L-226ENST00000486210 HMMRO75330 724 aa21.58■■□□□ 1.05
MCF2L-226ENST00000486210 ADORA1P30542 326 aa21.58■■□□□ 1.05
MCF2L-226ENST00000486210 TREML2Q5T2D2 321 aa21.58■■□□□ 1.05
MCF2L-226ENST00000486210 ZSCAN29Q8IWY8 852 aaPredicted RBP21.58■■□□□ 1.05
MCF2L-226ENST00000486210 ANKRD13CQ8N6S4 541 aa21.58■■□□□ 1.05
MCF2L-226ENST00000486210 SLC17A8Q8NDX2 589 aa21.58■■□□□ 1.05
MCF2L-226ENST00000486210 SMCR8Q8TEV9 937 aaPredicted RBP21.58■■□□□ 1.05
MCF2L-226ENST00000486210 DIS3LQ8TF46 1054 aaKnown RBP21.58■■□□□ 1.05
MCF2L-226ENST00000486210 PAWRQ96IZ0 340 aaKnown RBP21.58■■□□□ 1.05
MCF2L-226ENST00000486210 AGTPBP1Q9UPW5 1226 aa21.58■■□□□ 1.05
MCF2L-226ENST00000486210 PLXNB2O15031 1838 aa21.57■■□□□ 1.04
MCF2L-226ENST00000486210 DLL1O00548 723 aa21.57■■□□□ 1.04
MCF2L-226ENST00000486210 SURF6O75683 361 aaKnown RBP21.57■■□□□ 1.04
MCF2L-226ENST00000486210 CCDC102BQ68D86 513 aa21.57■■□□□ 1.04
MCF2L-226ENST00000486210 ZGPATQ8N5A5 531 aaKnown RBP21.57■■□□□ 1.04
MCF2L-226ENST00000486210 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
MCF2L-226ENST00000486210 CAPN2P17655 700 aa21.56■■□□□ 1.04
MCF2L-226ENST00000486210 PICALMQ13492 652 aa21.56■■□□□ 1.04
MCF2L-226ENST00000486210 FAM163AQ96GL9 167 aaPredicted RBP21.56■■□□□ 1.04
MCF2L-226ENST00000486210 TAOK2Q9UL54 1235 aa21.56■■□□□ 1.04
MCF2L-226ENST00000486210 EXOC6BQ9Y2D4 811 aa21.56■■□□□ 1.04
MCF2L-226ENST00000486210 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.56■■□□□ 1.04
MCF2L-226ENST00000486210 IGHDP01880 384 aa21.55■■□□□ 1.04
MCF2L-226ENST00000486210 BTDP43251 543 aa21.55■■□□□ 1.04
MCF2L-226ENST00000486210 G3BP1Q13283 466 aaKnown RBP eCLIP21.55■■□□□ 1.04
MCF2L-226ENST00000486210 RASGRF1Q13972 1273 aa21.55■■□□□ 1.04
MCF2L-226ENST00000486210 FAM110CQ1W6H9 321 aa21.55■■□□□ 1.04
MCF2L-226ENST00000486210 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.55■■□□□ 1.04
MCF2L-226ENST00000486210 DDX60LQ5H9U9 1706 aaKnown RBP21.55■■□□□ 1.04
MCF2L-226ENST00000486210 FAM196BA6NMK8 535 aa21.54■■□□□ 1.04
MCF2L-226ENST00000486210 HDAC1Q13547 482 aaPredicted RBP21.54■■□□□ 1.04
MCF2L-226ENST00000486210 DZIP1Q86YF9 867 aaKnown RBP21.54■■□□□ 1.04
MCF2L-226ENST00000486210 ZNF384Q8TF68 577 aa21.54■■□□□ 1.04
MCF2L-226ENST00000486210 COA7Q96BR5 231 aa21.54■■□□□ 1.04
MCF2L-226ENST00000486210 GDF15Q99988 308 aa21.54■■□□□ 1.04
MCF2L-226ENST00000486210 ABCF2Q9UG63 623 aa21.54■■□□□ 1.04
MCF2L-226ENST00000486210 RHBDL3P58872 404 aa21.53■■□□□ 1.04
MCF2L-226ENST00000486210 NECAB2Q7Z6G3 386 aa21.53■■□□□ 1.04
MCF2L-226ENST00000486210 SLF2Q8IX21 1173 aa21.53■■□□□ 1.04
MCF2L-226ENST00000486210 DCTPP1Q9H773 170 aa21.53■■□□□ 1.04
MCF2L-226ENST00000486210 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
MCF2L-226ENST00000486210 MROH7-TTC4A0A0A0MT08 1334 aa21.53■■□□□ 1.04
MCF2L-226ENST00000486210 TBC1D12O60347 775 aa21.52■■□□□ 1.04
MCF2L-226ENST00000486210 MNX1P50219 401 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-226ENST00000486210 TFCP2Q12800 502 aa21.52■■□□□ 1.04
MCF2L-226ENST00000486210 TRIM32Q13049 653 aa21.52■■□□□ 1.04
MCF2L-226ENST00000486210 PROCA1Q8NCQ7 364 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-226ENST00000486210 GJD2Q9UKL4 321 aa21.52■■□□□ 1.04
MCF2L-226ENST00000486210 PDS5AQ29RF7 1337 aaKnown RBP21.52■■□□□ 1.03
MCF2L-226ENST00000486210 GPR75-ASB3A0A0A6YYF3 556 aa21.51■■□□□ 1.03
MCF2L-226ENST00000486210 APBB1O00213 710 aa21.51■■□□□ 1.03
MCF2L-226ENST00000486210 BMP8BP34820 402 aa21.51■■□□□ 1.03
MCF2L-226ENST00000486210 TIMM10P62072 90 aa21.51■■□□□ 1.03
MCF2L-226ENST00000486210 OS9Q13438 667 aaPredicted RBP21.51■■□□□ 1.03
MCF2L-226ENST00000486210 C7orf61Q8IZ16 206 aa21.51■■□□□ 1.03
MCF2L-226ENST00000486210 PNMA3Q9UL41 463 aa21.51■■□□□ 1.03
MCF2L-226ENST00000486210 SIPA1L1O43166 1804 aa21.5■■□□□ 1.03
MCF2L-226ENST00000486210 HMGCRP04035 888 aa21.5■■□□□ 1.03
MCF2L-226ENST00000486210 MECOMQ03112 1051 aa21.5■■□□□ 1.03
MCF2L-226ENST00000486210 SPP2Q13103 211 aa21.5■■□□□ 1.03
MCF2L-226ENST00000486210 RRP1BQ14684 758 aaKnown RBP21.5■■□□□ 1.03
MCF2L-226ENST00000486210 SPTY2D1Q68D10 685 aaPredicted RBP21.5■■□□□ 1.03
MCF2L-226ENST00000486210 ANKLE1Q8NAG6 615 aa21.5■■□□□ 1.03
MCF2L-226ENST00000486210 RWDD1Q9H446 243 aaPredicted RBP21.5■■□□□ 1.03
MCF2L-226ENST00000486210 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.5■■□□□ 1.03
MCF2L-226ENST00000486210 ZMYND8Q9ULU4 1186 aaPredicted RBP21.5■■□□□ 1.03
MCF2L-226ENST00000486210 OSBPL5Q9H0X9 879 aaPredicted RBP21.49■■□□□ 1.03
MCF2L-226ENST00000486210 COL2A1P02458 1487 aaPredicted RBP21.48■■□□□ 1.03
MCF2L-226ENST00000486210 NPM3O75607 178 aaKnown RBP21.48■■□□□ 1.03
MCF2L-226ENST00000486210 HMGCS2P54868 508 aa21.48■■□□□ 1.03
MCF2L-226ENST00000486210 GORABQ5T7V8 394 aa21.48■■□□□ 1.03
MCF2L-226ENST00000486210 ZNF280CQ8ND82 737 aa21.48■■□□□ 1.03
MCF2L-226ENST00000486210 RPTORQ8N122 1335 aa21.48■■□□□ 1.03
MCF2L-226ENST00000486210 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
MCF2L-226ENST00000486210 GCLCP48506 637 aaPredicted RBP21.47■■□□□ 1.03
MCF2L-226ENST00000486210 HSP90AB4PQ58FF6 505 aa21.47■■□□□ 1.03
MCF2L-226ENST00000486210 ERICH6Q7L0X2 663 aa21.47■■□□□ 1.03
MCF2L-226ENST00000486210 RHPN1Q8TCX5 695 aa21.47■■□□□ 1.03
MCF2L-226ENST00000486210 XAGE2Q96GT9 111 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms