RNA–Protein interactions for RNA: ENST00000485502.1

CCL19-203, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2

Gene CCL19, Length 481 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-203ENST00000485502 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
CCL19-203ENST00000485502 SH2B1Q9NRF2 756 aaPredicted RBP13.16□□□□□ -0.3
CCL19-203ENST00000485502 PDS5AQ29RF7 1337 aaKnown RBP13.15□□□□□ -0.3
CCL19-203ENST00000485502 OTOFQ9HC10 1997 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 FKTNO75072 461 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 TNFAIP1Q13829 316 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 NECTIN1Q15223 517 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 UBE3CQ15386 1083 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 DIXDC1Q155Q3 683 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 HABP4Q5JVS0 413 aaKnown RBP13.15□□□□□ -0.3
CCL19-203ENST00000485502 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
CCL19-203ENST00000485502 RPAP1Q9BWH6 1393 aaPredicted RBP13.15□□□□□ -0.3
CCL19-203ENST00000485502 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
CCL19-203ENST00000485502 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.31
CCL19-203ENST00000485502 BRCA2P51587 3418 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCL19-203ENST00000485502 CASTP20810 708 aaKnown RBP13.14□□□□□ -0.31
CCL19-203ENST00000485502 PRDX5P30044 214 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 INHBEP58166 350 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 TCP10Q12799 353 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 MAP3K11Q16584 847 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 APOBEC3HQ6NTF7 200 aaKnown RBP13.14□□□□□ -0.31
CCL19-203ENST00000485502 BLOC1S2Q6QNY1 142 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 OPTNQ96CV9 577 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
CCL19-203ENST00000485502 IL25Q9H293 177 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
CCL19-203ENST00000485502 UNCXA6NJT0 531 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 GOLGA6L22H0YM25 854 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 SLC27A2O14975 620 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 MCAMP43121 646 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 ZAP70P43403 619 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 TNNI2P48788 182 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 PTH1RQ03431 593 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.13□□□□□ -0.31
CCL19-203ENST00000485502 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 ANKRD13AQ8IZ07 590 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
CCL19-203ENST00000485502 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 TMOD2Q9NZR1 351 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
CCL19-203ENST00000485502 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 MAST3O60307 1309 aa13.13□□□□□ -0.31
CCL19-203ENST00000485502 MANSC4A6NHS7 340 aaPredicted RBP13.12□□□□□ -0.31
CCL19-203ENST00000485502 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
CCL19-203ENST00000485502 GNAT2P19087 354 aa13.12□□□□□ -0.31
CCL19-203ENST00000485502 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
CCL19-203ENST00000485502 ZDHHC15Q96MV8 337 aa13.12□□□□□ -0.31
CCL19-203ENST00000485502 PTPN18Q99952 460 aa13.12□□□□□ -0.31
CCL19-203ENST00000485502 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
CCL19-203ENST00000485502 PDRG1Q9NUG6 133 aa13.12□□□□□ -0.31
CCL19-203ENST00000485502 DAGLAQ9Y4D2 1042 aa13.12□□□□□ -0.31
CCL19-203ENST00000485502 ZMYM6O95789 1325 aa13.12□□□□□ -0.31
CCL19-203ENST00000485502 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 IDH1O75874 414 aaKnown RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 LDHBP07195 334 aaKnown RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 ADD2P35612 726 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 DDIT3P35638 169 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 CUL4AQ13619 759 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 VGLL4Q14135 290 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 NBR1Q14596 966 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 IMMTQ16891 758 aaKnown RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 ZKSCAN4Q969J2 545 aaPredicted RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
CCL19-203ENST00000485502 UPF3BQ9BZI7 483 aaKnown RBP13.11□□□□□ -0.31
CCL19-203ENST00000485502 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
CCL19-203ENST00000485502 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 ZBTB48P10074 688 aaPredicted RBP13.1□□□□□ -0.31
CCL19-203ENST00000485502 NFIAQ12857 509 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 CRHR2Q13324 411 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 CDC42EP5Q6NZY7 148 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 HHIPL2Q6UWX4 724 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 WRNIP1Q96S55 665 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 ABCF2Q9UG63 623 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 CSADQ9Y600 493 aa13.1□□□□□ -0.31
CCL19-203ENST00000485502 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
CCL19-203ENST00000485502 INPP5BP32019 993 aa13.09□□□□□ -0.31
CCL19-203ENST00000485502 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
CCL19-203ENST00000485502 RAB3GAP1Q15042 981 aa13.09□□□□□ -0.31
CCL19-203ENST00000485502 PI16Q6UXB8 463 aa13.09□□□□□ -0.31
CCL19-203ENST00000485502 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
CCL19-203ENST00000485502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms