RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 KRT40Q6A162 431 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 SARM1Q6SZW1 724 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 CKAP2LQ8IYA6 745 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 FMR1NBQ8N0W7 255 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 SLAIN1Q8ND83 568 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 RIOK1Q9BRS2 568 aaKnown RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 NAT10Q9H0A0 1025 aaKnown RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 CBX8Q9HC52 389 aa8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 CCNL1Q9UK58 526 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 COL1A1P02452 1464 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-206ENST00000484236 FAM237AA0A1B0GTK4 181 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 GNPATO15228 680 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 PRKAB2O43741 272 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 DEXIO95424 95 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 TPM2P07951 284 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 SLC3A2P08195 630 aaKnown RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 CALM1P0DP23 149 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 CALM2P0DP24 149 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 CALM3P0DP25 149 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 CDC27P30260 824 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 CDC25BP30305 580 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 HIBADHP31937 336 aaKnown RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 ELOA2Q8IYF1 753 aaPredicted RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 PIBF1Q8WXW3 757 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 CELF1Q92879 486 aaKnown RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 NAP1L5Q96NT1 182 aaPredicted RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 BPIFA3Q9BQP9 254 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 NOL10Q9BSC4 688 aaKnown RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 UBAC1Q9BSL1 405 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 GOLPH3LQ9H4A5 285 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 ATP8A2Q9NTI2 1148 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 ABCF2Q9UG63 623 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 CLIC4Q9Y696 253 aa8.55□□□□□ -1.04
SHROOM3-206ENST00000484236 BAZ2AQ9UIF9 1905 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 MYH2Q9UKX2 1941 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 KIF28PB7ZC32 967 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 GOLGA6L19H0YKK7 550 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 POLR3DP05423 398 aaPredicted RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 RBM6P78332 1123 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 GNL2Q13823 731 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 SBK1Q52WX2 424 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 AXDND1Q5T1B0 1012 aaPredicted RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 TRAPPC3LQ5T215 181 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 OTUD7BQ6GQQ9 843 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 C15orf52Q6ZUT6 534 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 PLA2G4DQ86XP0 818 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 CERS3Q8IU89 383 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 CEP57L1Q8IYX8 460 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 ZNF654Q8IZM8 581 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 MIGA1Q8NAN2 632 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 FANCBQ8NB91 859 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 ARHGEF1Q92888 912 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 NSUN4Q96CB9 384 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 SDF4Q9BRK5 362 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 RNF26Q9BY78 433 aaPredicted RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 CRNKL1Q9BZJ0 848 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 FOXP1Q9H334 677 aaPredicted RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 RBM28Q9NW13 759 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 LEMD3Q9Y2U8 911 aa8.54□□□□□ -1.04
SHROOM3-206ENST00000484236 MINDY4BA8MYZ0 360 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 ORC4O43929 436 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 RANBP6O60518 1105 aaKnown RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 CUTAO60888 179 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 DDAH1O94760 285 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 MMP1P03956 469 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 XBP1P17861 261 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 TM4SF1P30408 202 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 RFC4P35249 363 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 ZNF75DP51815 510 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 DHX8Q14562 1220 aaKnown RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 IQCB1Q15051 598 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 SEC23AQ15436 765 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 ZRSR1Q15695 479 aaKnown RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 RILPL1Q5EBL4 403 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 ADGRA1Q86SQ6 560 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 LUZP1Q86V48 1076 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 IQCA1Q86XH1 822 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 RAB11FIP4Q86YS3 637 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 WDR66Q8TBY9 1149 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 PHKBQ93100 1093 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 KIF12Q96FN5 646 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 MRFAP1L1Q96HT8 127 aa8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 ZSCAN10Q96SZ4 725 aaPredicted RBP8.53□□□□□ -1.04
SHROOM3-206ENST00000484236 MAP3K14Q99558 947 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms