RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SCN9AQ15858 1988 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 EGFRP00533 1210 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 CYP21A2P08686 494 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 NEK4P51957 841 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 ANKRD1Q15327 319 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 BLOC1S2Q6QNY1 142 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 TEX11Q8IYF3 940 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 JAKMIP1Q96N16 626 aaKnown RBP16.55■□□□□ 0.24
SMAD9-204ENST00000483941 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
SMAD9-204ENST00000483941 NEK1Q96PY6 1258 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
SMAD9-204ENST00000483941 MKI67P46013 3256 aaKnown RBP16.55■□□□□ 0.24
SMAD9-204ENST00000483941 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
SMAD9-204ENST00000483941 RASEFQ8IZ41 740 aa16.54■□□□□ 0.24
SMAD9-204ENST00000483941 NCOA7Q8NI08 942 aa16.54■□□□□ 0.24
SMAD9-204ENST00000483941 GMLQ99445 158 aa16.54■□□□□ 0.24
SMAD9-204ENST00000483941 DCP1AQ9NPI6 582 aaPredicted RBP16.54■□□□□ 0.24
SMAD9-204ENST00000483941 USP40Q9NVE5 1235 aa16.54■□□□□ 0.24
SMAD9-204ENST00000483941 TMOD2Q9NZR1 351 aa16.54■□□□□ 0.24
SMAD9-204ENST00000483941 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
SMAD9-204ENST00000483941 PSME4Q14997 1843 aa16.54■□□□□ 0.24
SMAD9-204ENST00000483941 HTTP42858 3142 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
SMAD9-204ENST00000483941 FOXP2O15409 715 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 PRKAB2O43741 272 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 MYO1BO43795 1136 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
SMAD9-204ENST00000483941 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
SMAD9-204ENST00000483941 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 MTMR14Q8NCE2 650 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 SH3RF3Q8TEJ3 882 aaPredicted RBP16.53■□□□□ 0.24
SMAD9-204ENST00000483941 SDR42E1Q8WUS8 393 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 CSRNP1Q96S65 589 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 KRT23Q9C075 422 aa16.53■□□□□ 0.24
SMAD9-204ENST00000483941 E7EWF7 191 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 KIF4BQ2VIQ3 1234 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 RBM26Q5T8P6 1007 aaKnown RBP16.52■□□□□ 0.24
SMAD9-204ENST00000483941 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.24
SMAD9-204ENST00000483941 MFSD6Q6ZSS7 791 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 SULF1Q8IWU6 871 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.24
SMAD9-204ENST00000483941 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
SMAD9-204ENST00000483941 MCM9Q9NXL9 1143 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 GGA3Q9NZ52 723 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 HPS5Q9UPZ3 1129 aa16.52■□□□□ 0.24
SMAD9-204ENST00000483941 POLR3DP05423 398 aaPredicted RBP16.51■□□□□ 0.23
SMAD9-204ENST00000483941 RHBDL3P58872 404 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 PDE4BQ07343 736 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 PPARAQ07869 468 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 AKNAD1Q5T1N1 836 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 DHX32Q7L7V1 743 aaKnown RBP16.51■□□□□ 0.23
SMAD9-204ENST00000483941 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
SMAD9-204ENST00000483941 STAG1Q8WVM7 1258 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 PDRG1Q9NUG6 133 aa16.51■□□□□ 0.23
SMAD9-204ENST00000483941 WDR19Q8NEZ3 1342 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 CENPFP49454 3210 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 USP17L21D6R901 530 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 RPS6KB1P23443 525 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 MCM5P33992 734 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 HAND2P61296 217 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 FGD1P98174 961 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 CDC42EP5Q6NZY7 148 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 CDCA5Q96FF9 252 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 DHX36Q9H2U1 1008 aaKnown RBP16.5■□□□□ 0.23
SMAD9-204ENST00000483941 MYH2Q9UKX2 1941 aa16.5■□□□□ 0.23
SMAD9-204ENST00000483941 ZNF280AP59817 542 aaPredicted RBP16.49■□□□□ 0.23
SMAD9-204ENST00000483941 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
SMAD9-204ENST00000483941 FKBP1CQ5VVH2 108 aa16.49■□□□□ 0.23
SMAD9-204ENST00000483941 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
SMAD9-204ENST00000483941 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
SMAD9-204ENST00000483941 FLT1P17948 1338 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
SMAD9-204ENST00000483941 ENTPD3O75355 529 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 HLA-DOAP06340 250 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 PKN2Q16513 984 aaKnown RBP16.48■□□□□ 0.23
SMAD9-204ENST00000483941 ADCK5Q3MIX3 580 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 C12orf60Q5U649 245 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 FBXL16Q8N461 479 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 ESR2Q92731 530 aa16.48■□□□□ 0.23
SMAD9-204ENST00000483941 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
SMAD9-204ENST00000483941 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms