RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 DNAJC2Q99543 621 aaKnown RBP12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 COL2A1P02458 1487 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 PHF20L1A8MW92 1017 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 DYNLL1P63167 89 aaKnown RBP12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 MAP3K12Q12852 859 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 BECN1Q14457 450 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 MAPKAPK5Q8IW41 473 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 SCYL3Q8IZE3 742 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 MIGA1Q8NAN2 632 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 TGFBRAP1Q8WUH2 860 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 LRRCC1Q9C099 1032 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 PICK1Q9NRD5 415 aa12.16□□□□□ -0.46
HLA-DQA1-206ENST00000482745 ATAD5Q96QE3 1844 aa12.15□□□□□ -0.46
HLA-DQA1-206ENST00000482745 SMARCA5O60264 1052 aaPredicted RBP12.15□□□□□ -0.46
HLA-DQA1-206ENST00000482745 IGSF3O75054 1194 aa12.15□□□□□ -0.46
HLA-DQA1-206ENST00000482745 PPP4CP60510 307 aa12.15□□□□□ -0.46
HLA-DQA1-206ENST00000482745 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.15□□□□□ -0.46
HLA-DQA1-206ENST00000482745 SIPA1L1O43166 1804 aa12.15□□□□□ -0.46
HLA-DQA1-206ENST00000482745 FLT1P17948 1338 aa12.15□□□□□ -0.46
HLA-DQA1-206ENST00000482745 GOLIM4O00461 696 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CLCN1P35523 988 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TTF1Q15361 905 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 BTBD19C9JJ37 291 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ZHX2Q9Y6X8 837 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 MYH1P12882 1939 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PHIPQ8WWQ0 1821 aa12.14□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CTNND1O60716 968 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PTPRAP18433 802 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 HSP90AA2PQ14568 343 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ZMYND15Q9H091 742 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 SAP30BPQ9UHR5 308 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 KCNH4Q9UQ05 1017 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PTPRFP10586 1907 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TBC1D12O60347 775 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 HSP90AA1P07900 732 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 USP5P45974 858 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 SLC9C2Q5TAH2 1124 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CD99L2Q8TCZ2 262 aa12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-206ENST00000482745 NAV1Q8NEY1 1877 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PDE6AP16499 860 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 SP3Q02447 781 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ERO1AQ96HE7 468 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PAG1Q9NWQ8 432 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PALD1Q9ULE6 856 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TRIM17Q9Y577 477 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PCDHB15Q9Y5E8 787 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 MYH7P12883 1935 aa12.12□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TRIM75PA6NK02 468 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ATP5JP18859 108 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PKN2Q16513 984 aaKnown RBP12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 NAP1L5Q96NT1 182 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 HERC5Q9UII4 1024 aaKnown RBP12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PDHXO00330 501 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CXCL11O14625 94 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 HLA-DOAP06340 250 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TMED8Q6PL24 325 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ANKRD23Q86SG2 305 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 AFG3L2Q9Y4W6 797 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
HLA-DQA1-206ENST00000482745 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TLR2O60603 784 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 FBXO46Q6PJ61 603 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 GADL1Q6ZQY3 521 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 OTOP1Q7RTM1 612 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 HAUS7Q99871 368 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ZSWIM8A7E2V4 1837 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 A0A0G2JLL6 359 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 CAP2P40123 477 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 MOGSQ13724 837 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 RRP1BQ14684 758 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 PRRT2Q7Z6L0 340 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 RIOK1Q9BRS2 568 aaKnown RBP12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 DNAJC18Q9H819 358 aa12.1□□□□□ -0.47
HLA-DQA1-206ENST00000482745 GOLGA6L3A6NEY3 463 aa12.09□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
HLA-DQA1-206ENST00000482745 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
HLA-DQA1-206ENST00000482745 GPATCH3Q96I76 525 aa12.09□□□□□ -0.47
HLA-DQA1-206ENST00000482745 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.09□□□□□ -0.47
HLA-DQA1-206ENST00000482745 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
HLA-DQA1-206ENST00000482745 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
HLA-DQA1-206ENST00000482745 TCRBV5S4A2TA0A5A2 114 aa12.08□□□□□ -0.47
HLA-DQA1-206ENST00000482745 FSD2A1L4K1 749 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms