RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 BRCA2P51587 3418 aa23.76■■□□□ 1.39
CHPF2-203ENST00000482173 FTSJ3Q8IY81 847 aaKnown RBP23.75■■□□□ 1.39
CHPF2-203ENST00000482173 GABRQQ9UN88 632 aa23.75■■□□□ 1.39
CHPF2-203ENST00000482173 AGTPBP1Q9UPW5 1226 aa23.75■■□□□ 1.39
CHPF2-203ENST00000482173 MGAMO43451 1857 aa23.75■■□□□ 1.39
CHPF2-203ENST00000482173 BAG3O95817 575 aa23.74■■□□□ 1.39
CHPF2-203ENST00000482173 SPP2Q13103 211 aa23.74■■□□□ 1.39
CHPF2-203ENST00000482173 AATFQ9NY61 560 aaKnown RBP eCLIP23.74■■□□□ 1.39
CHPF2-203ENST00000482173 COL2A1P02458 1487 aaPredicted RBP23.74■■□□□ 1.39
CHPF2-203ENST00000482173 CCL5P13501 91 aa23.73■■□□□ 1.39
CHPF2-203ENST00000482173 HABP4Q5JVS0 413 aaKnown RBP23.73■■□□□ 1.39
CHPF2-203ENST00000482173 TREML2Q5T2D2 321 aa23.73■■□□□ 1.39
CHPF2-203ENST00000482173 ITPRIPQ8IWB1 547 aa23.73■■□□□ 1.39
CHPF2-203ENST00000482173 ZNF280CQ8ND82 737 aa23.73■■□□□ 1.39
CHPF2-203ENST00000482173 CYP2E1P05181 493 aaPredicted RBP23.72■■□□□ 1.39
CHPF2-203ENST00000482173 PLCG2P16885 1265 aa23.72■■□□□ 1.39
CHPF2-203ENST00000482173 CAP2P40123 477 aa23.72■■□□□ 1.39
CHPF2-203ENST00000482173 UBXN2AP68543 259 aa23.72■■□□□ 1.39
CHPF2-203ENST00000482173 RRP1BQ14684 758 aaKnown RBP23.72■■□□□ 1.39
CHPF2-203ENST00000482173 PI4KBQ9UBF8 816 aa23.72■■□□□ 1.39
CHPF2-203ENST00000482173 HERC5Q9UII4 1024 aaKnown RBP23.72■■□□□ 1.39
CHPF2-203ENST00000482173 TNPO2O14787 897 aaKnown RBP23.71■■□□□ 1.39
CHPF2-203ENST00000482173 ZBTB7BO15156 539 aaPredicted RBP23.71■■□□□ 1.39
CHPF2-203ENST00000482173 FLT3LGP49771 235 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 PPP4CP60510 307 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 ANKRD13CQ8N6S4 541 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 PROCA1Q8NCQ7 364 aaPredicted RBP23.71■■□□□ 1.39
CHPF2-203ENST00000482173 SLAIN1Q8ND83 568 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 NKX2-3Q8TAU0 364 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 SHISA4Q96DD7 197 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 TBC1D2Q9BYX2 928 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 RNF208Q9H0X6 261 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 PNMA3Q9UL41 463 aa23.71■■□□□ 1.39
CHPF2-203ENST00000482173 NOP58Q9Y2X3 529 aaKnown RBP23.71■■□□□ 1.39
CHPF2-203ENST00000482173 USP17L5A8MUK1 530 aa23.7■■□□□ 1.38
CHPF2-203ENST00000482173 ADCY3O60266 1144 aa23.7■■□□□ 1.38
CHPF2-203ENST00000482173 GJB1P08034 283 aa23.7■■□□□ 1.38
CHPF2-203ENST00000482173 RLBP1P12271 317 aa23.7■■□□□ 1.38
CHPF2-203ENST00000482173 MIER1Q8N108 512 aa23.7■■□□□ 1.38
CHPF2-203ENST00000482173 TGFBRAP1Q8WUH2 860 aa23.7■■□□□ 1.38
CHPF2-203ENST00000482173 ZNF512BQ96KM6 892 aaPredicted RBP23.7■■□□□ 1.38
CHPF2-203ENST00000482173 DHX36Q9H2U1 1008 aaKnown RBP23.7■■□□□ 1.38
CHPF2-203ENST00000482173 ZAP70P43403 619 aa23.69■■□□□ 1.38
CHPF2-203ENST00000482173 GJA8P48165 433 aa23.69■■□□□ 1.38
CHPF2-203ENST00000482173 HMGCS2P54868 508 aa23.69■■□□□ 1.38
CHPF2-203ENST00000482173 ADGRA1Q86SQ6 560 aa23.69■■□□□ 1.38
CHPF2-203ENST00000482173 MAPKAPK5Q8IW41 473 aa23.69■■□□□ 1.38
CHPF2-203ENST00000482173 ATAD5Q96QE3 1844 aa23.68■■□□□ 1.38
CHPF2-203ENST00000482173 CCDC8Q9H0W5 538 aaPredicted RBP23.68■■□□□ 1.38
CHPF2-203ENST00000482173 AS3MTQ9HBK9 375 aa23.68■■□□□ 1.38
CHPF2-203ENST00000482173 PIH1D3Q9NQM4 214 aaKnown RBP23.68■■□□□ 1.38
CHPF2-203ENST00000482173 DBNLQ9UJU6 430 aaKnown RBP23.68■■□□□ 1.38
CHPF2-203ENST00000482173 ELNP15502 786 aa23.67■■□□□ 1.38
CHPF2-203ENST00000482173 PABPC4Q13310 644 aaKnown RBP eCLIP23.67■■□□□ 1.38
CHPF2-203ENST00000482173 FOXP4Q8IVH2 680 aaPredicted RBP23.67■■□□□ 1.38
CHPF2-203ENST00000482173 COA7Q96BR5 231 aa23.67■■□□□ 1.38
CHPF2-203ENST00000482173 EAF2Q96CJ1 260 aaPredicted RBP23.67■■□□□ 1.38
CHPF2-203ENST00000482173 UNC93B1Q9H1C4 597 aa23.67■■□□□ 1.38
CHPF2-203ENST00000482173 MYO5AQ9Y4I1 1855 aaKnown RBP23.66■■□□□ 1.38
CHPF2-203ENST00000482173 FLT1P17948 1338 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 MAST2Q6P0Q8 1798 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 H0YGN5 161 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 IGSF3O75054 1194 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 GCLCP48506 637 aaPredicted RBP23.66■■□□□ 1.38
CHPF2-203ENST00000482173 IRF5Q13568 498 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 FAM110CQ1W6H9 321 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 PXYLP1Q8TE99 480 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 TRIM34Q9BYJ4 488 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 TLR7Q9NYK1 1049 aaKnown RBP23.66■■□□□ 1.38
CHPF2-203ENST00000482173 TAOK2Q9UL54 1235 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 PALD1Q9ULE6 856 aa23.66■■□□□ 1.38
CHPF2-203ENST00000482173 SH3D19Q5HYK7 790 aa23.65■■□□□ 1.38
CHPF2-203ENST00000482173 CRACR2BQ8N4Y2 399 aaPredicted RBP23.65■■□□□ 1.38
CHPF2-203ENST00000482173 DPF3Q92784 378 aa23.65■■□□□ 1.38
CHPF2-203ENST00000482173 WDR18Q9BV38 432 aa23.65■■□□□ 1.38
CHPF2-203ENST00000482173 ASCC2Q9H1I8 757 aaPredicted RBP23.65■■□□□ 1.38
CHPF2-203ENST00000482173 DOCK3Q8IZD9 2030 aa23.64■■□□□ 1.38
CHPF2-203ENST00000482173 SIPA1L1O43166 1804 aa23.64■■□□□ 1.38
CHPF2-203ENST00000482173 INHAP05111 366 aa23.64■■□□□ 1.37
CHPF2-203ENST00000482173 ASNSP08243 561 aa23.64■■□□□ 1.37
CHPF2-203ENST00000482173 CYP7A1P22680 504 aa23.64■■□□□ 1.37
CHPF2-203ENST00000482173 DYNLL1P63167 89 aaKnown RBP23.64■■□□□ 1.37
CHPF2-203ENST00000482173 METTL16Q86W50 562 aaKnown RBP23.64■■□□□ 1.37
CHPF2-203ENST00000482173 U2AF1L4Q8WU68 220 aaKnown RBP23.64■■□□□ 1.37
CHPF2-203ENST00000482173 SAP30BPQ9UHR5 308 aaKnown RBP23.64■■□□□ 1.37
CHPF2-203ENST00000482173 COLQQ9Y215 455 aaPredicted RBP23.64■■□□□ 1.37
CHPF2-203ENST00000482173 LOC285556D6RIA3 1793 aa23.64■■□□□ 1.37
CHPF2-203ENST00000482173 IDH1O75874 414 aaKnown RBP23.63■■□□□ 1.37
CHPF2-203ENST00000482173 JAG1P78504 1218 aa23.63■■□□□ 1.37
CHPF2-203ENST00000482173 CEP85Q6P2H3 762 aa23.63■■□□□ 1.37
CHPF2-203ENST00000482173 CDK5RAP2Q96SN8 1893 aa23.63■■□□□ 1.37
CHPF2-203ENST00000482173 DNAJC18Q9H819 358 aa23.63■■□□□ 1.37
CHPF2-203ENST00000482173 CEP290O15078 2479 aa23.62■■□□□ 1.37
CHPF2-203ENST00000482173 SGPL1O95470 568 aa23.62■■□□□ 1.37
CHPF2-203ENST00000482173 BACE1P56817 501 aa23.62■■□□□ 1.37
CHPF2-203ENST00000482173 MTMR2Q13614 643 aa23.62■■□□□ 1.37
CHPF2-203ENST00000482173 UBE2Q1Q7Z7E8 422 aa23.62■■□□□ 1.37
CHPF2-203ENST00000482173 TMOD4Q9NZQ9 345 aa23.62■■□□□ 1.37
CHPF2-203ENST00000482173 HLA-DOAP06340 250 aa23.61■■□□□ 1.37
CHPF2-203ENST00000482173 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms