RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ITPKAP23677 461 aa6.45□□□□□ -1.38
COPA-204ENST00000481522 PRKCQQ04759 706 aa6.45□□□□□ -1.38
COPA-204ENST00000481522 SPRED3Q2MJR0 410 aa6.45□□□□□ -1.38
COPA-204ENST00000481522 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.45□□□□□ -1.38
COPA-204ENST00000481522 DTHD1Q6ZMT9 781 aa6.45□□□□□ -1.38
COPA-204ENST00000481522 ZNF576Q9H609 170 aa6.45□□□□□ -1.38
COPA-204ENST00000481522 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 ANKRD33BA6NCL7 494 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 CD96P40200 585 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 PTPN12Q05209 780 aaKnown RBP6.44□□□□□ -1.38
COPA-204ENST00000481522 TMCO4Q5TGY1 634 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 BCO2Q9BYV7 579 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 LGR6Q9HBX8 967 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 SPG7Q9UQ90 795 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 ERCC6Q03468 1493 aa6.44□□□□□ -1.38
COPA-204ENST00000481522 B3GALT4O96024 378 aa6.43□□□□□ -1.38
COPA-204ENST00000481522 LDHBP07195 334 aaKnown RBP6.43□□□□□ -1.38
COPA-204ENST00000481522 FCGRTP55899 365 aa6.43□□□□□ -1.38
COPA-204ENST00000481522 FGD1P98174 961 aa6.43□□□□□ -1.38
COPA-204ENST00000481522 ZNF423Q2M1K9 1284 aa6.43□□□□□ -1.38
COPA-204ENST00000481522 FAM181AQ8N9Y4 354 aa6.43□□□□□ -1.38
COPA-204ENST00000481522 CORO1BQ9BR76 489 aa6.43□□□□□ -1.38
COPA-204ENST00000481522 WDR26Q9H7D7 661 aa6.43□□□□□ -1.38
COPA-204ENST00000481522 SYNJ2O15056 1496 aa6.42□□□□□ -1.38
COPA-204ENST00000481522 FAM87AP0C7U9 286 aa6.42□□□□□ -1.38
COPA-204ENST00000481522 XRCC5P13010 732 aaKnown RBP6.42□□□□□ -1.38
COPA-204ENST00000481522 NFIXQ14938 502 aa6.42□□□□□ -1.38
COPA-204ENST00000481522 IFI16Q16666 785 aaKnown RBP6.42□□□□□ -1.38
COPA-204ENST00000481522 CRELD1Q96HD1 420 aa6.42□□□□□ -1.38
COPA-204ENST00000481522 SETDB2Q96T68 719 aa6.42□□□□□ -1.38
COPA-204ENST00000481522 SRCIN1Q9C0H9 1055 aa6.42□□□□□ -1.38
COPA-204ENST00000481522 AOC2O75106 756 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 GSTT1P30711 240 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 AOC3Q16853 763 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 EAPPQ56P03 285 aaPredicted RBP6.41□□□□□ -1.38
COPA-204ENST00000481522 RPS26P11Q5JNZ5 115 aaPredicted RBP6.41□□□□□ -1.38
COPA-204ENST00000481522 SLC23A3Q6PIS1 610 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 NXPE4Q6UWF7 544 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 LSRQ86X29 649 aaPredicted RBP6.41□□□□□ -1.38
COPA-204ENST00000481522 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 HRASLS5Q96KN8 279 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 GPN3Q9UHW5 284 aaPredicted RBP6.41□□□□□ -1.38
COPA-204ENST00000481522 WWC3Q9ULE0 1092 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 SYNGAP1Q96PV0 1343 aa6.41□□□□□ -1.38
COPA-204ENST00000481522 GIPC1O14908 333 aa6.4□□□□□ -1.38
COPA-204ENST00000481522 PRPF40AO75400 957 aaKnown RBP6.4□□□□□ -1.38
COPA-204ENST00000481522 ECEL1O95672 775 aa6.4□□□□□ -1.38
COPA-204ENST00000481522 CDK5R2Q13319 367 aa6.4□□□□□ -1.38
COPA-204ENST00000481522 ANGEL2Q5VTE6 544 aaKnown RBP6.4□□□□□ -1.38
COPA-204ENST00000481522 CYB5RLQ6IPT4 315 aa6.4□□□□□ -1.38
COPA-204ENST00000481522 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.38
COPA-204ENST00000481522 MKNK2Q9HBH9 465 aa6.4□□□□□ -1.38
COPA-204ENST00000481522 RTEL1Q9NZ71 1219 aa6.4□□□□□ -1.38
COPA-204ENST00000481522 AKAP2Q9Y2D5 859 aa6.4□□□□□ -1.38
COPA-204ENST00000481522 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 ERCC3P19447 782 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 HNRNPUQ00839 825 aaKnown RBP eCLIP6.39□□□□□ -1.39
COPA-204ENST00000481522 PPP2R3AQ06190 1150 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 AP3B2Q13367 1082 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 PDE3AQ14432 1141 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 DNAJC14Q6Y2X3 702 aaPredicted RBP6.39□□□□□ -1.39
COPA-204ENST00000481522 ARHGAP27Q6ZUM4 889 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 FBXO15Q8NCQ5 510 aaPredicted RBP6.39□□□□□ -1.39
COPA-204ENST00000481522 WDR18Q9BV38 432 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 PPP1R9AQ9ULJ8 1098 aa6.39□□□□□ -1.39
COPA-204ENST00000481522 TMEM265A0A087WTH1 108 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 ZNF157P51786 506 aaPredicted RBP6.38□□□□□ -1.39
COPA-204ENST00000481522 ZXDCQ2QGD7 858 aaPredicted RBP6.38□□□□□ -1.39
COPA-204ENST00000481522 FYB2Q5VWT5 728 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 NPAS4Q8IUM7 802 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 FRMD6Q96NE9 622 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 ZCCHC4Q9H5U6 513 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 C12orf49Q9H741 205 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 PIDD1Q9HB75 910 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 FAM8A1Q9UBU6 413 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 ARHGEF11O15085 1522 aa6.38□□□□□ -1.39
COPA-204ENST00000481522 AKAP8O43823 692 aaKnown RBP6.37□□□□□ -1.39
COPA-204ENST00000481522 CEACAM5P06731 702 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 GNA15P30679 374 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 MFAP1P55081 439 aaKnown RBP6.37□□□□□ -1.39
COPA-204ENST00000481522 FAAP100Q0VG06 881 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 ATG14Q6ZNE5 492 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 KCNC2Q96PR1 638 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 TMEM39AQ9NV64 488 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 PPM1HQ9ULR3 514 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 U3KQE9 123 aa6.37□□□□□ -1.39
COPA-204ENST00000481522 TMPRSS2O15393 492 aa6.36□□□□□ -1.39
COPA-204ENST00000481522 NUAK1O60285 661 aa6.36□□□□□ -1.39
COPA-204ENST00000481522 USP17L7P0C7H9 530 aa6.36□□□□□ -1.39
COPA-204ENST00000481522 EIF4BP23588 611 aaKnown RBP6.36□□□□□ -1.39
COPA-204ENST00000481522 OXCT1P55809 520 aa6.36□□□□□ -1.39
COPA-204ENST00000481522 DUSP9Q99956 384 aaKnown RBP6.36□□□□□ -1.39
COPA-204ENST00000481522 OSBPL7Q9BZF2 842 aa6.36□□□□□ -1.39
COPA-204ENST00000481522 ATXN3LQ9H3M9 355 aa6.36□□□□□ -1.39
COPA-204ENST00000481522 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
COPA-204ENST00000481522 TPTE2Q6XPS3 522 aa6.35□□□□□ -1.39
COPA-204ENST00000481522 SMYD4Q8IYR2 804 aaPredicted RBP6.35□□□□□ -1.39
COPA-204ENST00000481522 C3orf58Q8NDZ4 430 aa6.35□□□□□ -1.39
COPA-204ENST00000481522 CEP44Q9C0F1 390 aa6.35□□□□□ -1.39
COPA-204ENST00000481522 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms