RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 SZT2Q5T011 3432 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 ATP8B2P98198 1209 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 TNNI3KQ59H18 835 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 TREML2Q5T2D2 321 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 SH3RF3Q8TEJ3 882 aaPredicted RBP20.56■□□□□ 0.88
TRIM13-208ENST00000478111 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 SNRKQ9NRH2 765 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 LRP2BPQ9P2M1 347 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 AGTPBP1Q9UPW5 1226 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 FPGT-TNNI3KV9GXZ4 949 aa20.56■□□□□ 0.88
TRIM13-208ENST00000478111 CCL5P13501 91 aa20.55■□□□□ 0.88
TRIM13-208ENST00000478111 UBE2Q1Q7Z7E8 422 aa20.55■□□□□ 0.88
TRIM13-208ENST00000478111 TEX11Q8IYF3 940 aa20.55■□□□□ 0.88
TRIM13-208ENST00000478111 CYP2E1P05181 493 aaPredicted RBP20.54■□□□□ 0.88
TRIM13-208ENST00000478111 GJB1P08034 283 aa20.54■□□□□ 0.88
TRIM13-208ENST00000478111 CAP2P40123 477 aa20.54■□□□□ 0.88
TRIM13-208ENST00000478111 GJA8P48165 433 aa20.54■□□□□ 0.88
TRIM13-208ENST00000478111 SPP2Q13103 211 aa20.54■□□□□ 0.88
TRIM13-208ENST00000478111 ADGRA1Q86SQ6 560 aa20.54■□□□□ 0.88
TRIM13-208ENST00000478111 C1orf115Q9H7X2 142 aa20.54■□□□□ 0.88
TRIM13-208ENST00000478111 FLT3LGP49771 235 aa20.53■□□□□ 0.88
TRIM13-208ENST00000478111 PPP4CP60510 307 aa20.53■□□□□ 0.88
TRIM13-208ENST00000478111 PROCA1Q8NCQ7 364 aaPredicted RBP20.53■□□□□ 0.88
TRIM13-208ENST00000478111 SLAIN1Q8ND83 568 aa20.53■□□□□ 0.88
TRIM13-208ENST00000478111 SMCR8Q8TEV9 937 aaPredicted RBP20.53■□□□□ 0.88
TRIM13-208ENST00000478111 ZNF512BQ96KM6 892 aaPredicted RBP20.53■□□□□ 0.88
TRIM13-208ENST00000478111 AATFQ9NY61 560 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRIM13-208ENST00000478111 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
TRIM13-208ENST00000478111 H0YGN5 161 aa20.52■□□□□ 0.88
TRIM13-208ENST00000478111 SURF6O75683 361 aaKnown RBP20.52■□□□□ 0.88
TRIM13-208ENST00000478111 RLBP1P12271 317 aa20.52■□□□□ 0.88
TRIM13-208ENST00000478111 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.88
TRIM13-208ENST00000478111 TTC39AQ5SRH9 613 aa20.52■□□□□ 0.88
TRIM13-208ENST00000478111 NAA16Q6N069 864 aaPredicted RBP20.52■□□□□ 0.88
TRIM13-208ENST00000478111 ZNF280CQ8ND82 737 aa20.52■□□□□ 0.88
TRIM13-208ENST00000478111 RNF208Q9H0X6 261 aa20.52■□□□□ 0.88
TRIM13-208ENST00000478111 HERC5Q9UII4 1024 aaKnown RBP20.52■□□□□ 0.88
TRIM13-208ENST00000478111 ZBTB7BO15156 539 aaPredicted RBP20.51■□□□□ 0.87
TRIM13-208ENST00000478111 ADCY3O60266 1144 aa20.51■□□□□ 0.87
TRIM13-208ENST00000478111 UBXN2AP68543 259 aa20.51■□□□□ 0.87
TRIM13-208ENST00000478111 JAG1P78504 1218 aa20.51■□□□□ 0.87
TRIM13-208ENST00000478111 ANKRD13CQ8N6S4 541 aa20.51■□□□□ 0.87
TRIM13-208ENST00000478111 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
TRIM13-208ENST00000478111 UNC93B1Q9H1C4 597 aa20.51■□□□□ 0.87
TRIM13-208ENST00000478111 PI4KBQ9UBF8 816 aa20.51■□□□□ 0.87
TRIM13-208ENST00000478111 BIN2Q9UBW5 565 aaPredicted RBP20.51■□□□□ 0.87
TRIM13-208ENST00000478111 DBNLQ9UJU6 430 aaKnown RBP20.51■□□□□ 0.87
TRIM13-208ENST00000478111 COLQQ9Y215 455 aaPredicted RBP20.51■□□□□ 0.87
TRIM13-208ENST00000478111 TNPO2O14787 897 aaKnown RBP20.5■□□□□ 0.87
TRIM13-208ENST00000478111 BAG3O95817 575 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 ELNP15502 786 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 HMGCS2P54868 508 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 IRF5Q13568 498 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 FAM110CQ1W6H9 321 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 SH3D19Q5HYK7 790 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 METTL16Q86W50 562 aaKnown RBP20.5■□□□□ 0.87
TRIM13-208ENST00000478111 PXYLP1Q8TE99 480 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 TGFBRAP1Q8WUH2 860 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 DHX36Q9H2U1 1008 aaKnown RBP20.5■□□□□ 0.87
TRIM13-208ENST00000478111 DNAJC18Q9H819 358 aa20.5■□□□□ 0.87
TRIM13-208ENST00000478111 TLR7Q9NYK1 1049 aaKnown RBP20.5■□□□□ 0.87
TRIM13-208ENST00000478111 USP17L5A8MUK1 530 aa20.49■□□□□ 0.87
TRIM13-208ENST00000478111 ZAP70P43403 619 aa20.49■□□□□ 0.87
TRIM13-208ENST00000478111 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
TRIM13-208ENST00000478111 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
TRIM13-208ENST00000478111 MAPKAPK5Q8IW41 473 aa20.49■□□□□ 0.87
TRIM13-208ENST00000478111 U2AF1L4Q8WU68 220 aaKnown RBP20.49■□□□□ 0.87
TRIM13-208ENST00000478111 PIH1D3Q9NQM4 214 aaKnown RBP20.49■□□□□ 0.87
TRIM13-208ENST00000478111 PNMA3Q9UL41 463 aa20.49■□□□□ 0.87
TRIM13-208ENST00000478111 MYH1P12882 1939 aa20.49■□□□□ 0.87
TRIM13-208ENST00000478111 PLXNB2O15031 1838 aa20.48■□□□□ 0.87
TRIM13-208ENST00000478111 INHAP05111 366 aa20.48■□□□□ 0.87
TRIM13-208ENST00000478111 PLCG2P16885 1265 aa20.48■□□□□ 0.87
TRIM13-208ENST00000478111 EAF2Q96CJ1 260 aaPredicted RBP20.48■□□□□ 0.87
TRIM13-208ENST00000478111 NOL10Q9BSC4 688 aaKnown RBP20.48■□□□□ 0.87
TRIM13-208ENST00000478111 WDR18Q9BV38 432 aa20.48■□□□□ 0.87
TRIM13-208ENST00000478111 ASCC2Q9H1I8 757 aaPredicted RBP20.48■□□□□ 0.87
TRIM13-208ENST00000478111 FLT1P17948 1338 aa20.48■□□□□ 0.87
TRIM13-208ENST00000478111 IGSF3O75054 1194 aa20.47■□□□□ 0.87
TRIM13-208ENST00000478111 SGPL1O95470 568 aa20.47■□□□□ 0.87
TRIM13-208ENST00000478111 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIM13-208ENST00000478111 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
TRIM13-208ENST00000478111 FOXP4Q8IVH2 680 aaPredicted RBP20.47■□□□□ 0.87
TRIM13-208ENST00000478111 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
TRIM13-208ENST00000478111 PALD1Q9ULE6 856 aa20.47■□□□□ 0.87
TRIM13-208ENST00000478111 GCLCP48506 637 aaPredicted RBP20.46■□□□□ 0.87
TRIM13-208ENST00000478111 DYNLL1P63167 89 aaKnown RBP20.46■□□□□ 0.87
TRIM13-208ENST00000478111 ITPRIPQ8IWB1 547 aa20.46■□□□□ 0.87
TRIM13-208ENST00000478111 FTSJ3Q8IY81 847 aaKnown RBP20.46■□□□□ 0.87
TRIM13-208ENST00000478111 COA7Q96BR5 231 aa20.46■□□□□ 0.87
TRIM13-208ENST00000478111 AS3MTQ9HBK9 375 aa20.46■□□□□ 0.87
TRIM13-208ENST00000478111 ASNSP08243 561 aa20.45■□□□□ 0.86
TRIM13-208ENST00000478111 BACE1P56817 501 aa20.45■□□□□ 0.86
TRIM13-208ENST00000478111 PABPC4Q13310 644 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRIM13-208ENST00000478111 CEP85Q6P2H3 762 aa20.45■□□□□ 0.86
TRIM13-208ENST00000478111 MIER1Q8N108 512 aa20.45■□□□□ 0.86
TRIM13-208ENST00000478111 DPF3Q92784 378 aa20.45■□□□□ 0.86
TRIM13-208ENST00000478111 PAK6Q9NQU5 681 aaPredicted RBP20.45■□□□□ 0.86
TRIM13-208ENST00000478111 GJD2Q9UKL4 321 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms