RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ID3Q02535 119 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 PWP1Q13610 501 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 RSPO4Q2I0M5 234 aaPredicted RBP4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 CCDC96Q2M329 555 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 TSNAXIP1Q2TAA8 658 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 AXDND1Q5T1B0 1012 aaPredicted RBP4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 PRR23CQ6ZRP0 262 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 DYMQ7RTS9 669 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 FAM20CQ8IXL6 584 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 FAM9BQ8IZU0 186 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 EVI5LQ96CN4 794 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 MRRFQ96E11 262 aaKnown RBP4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 YTHDC1Q96MU7 727 aaKnown RBP4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 YIPF2Q9BWQ6 316 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 BACH2Q9BYV9 841 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 ATXN3LQ9H3M9 355 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 PPP1R9AQ9ULJ8 1098 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 ACTL7BQ9Y614 415 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 EIF4G1Q04637 1599 aaKnown RBP4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 TMPRSS2O15393 492 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 RECKO95980 971 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 MAP4P27816 1152 aaKnown RBP4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 ASPAP45381 313 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 ZC3H12AQ5D1E8 599 aaKnown RBP4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 DIEXFQ68CQ4 756 aaKnown RBP4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 GIMAP6Q6P9H5 292 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 CASC1Q6TDU7 716 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 MPRIPQ6WCQ1 1025 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 BEND4Q6ZU67 534 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 HS2ST1Q7LGA3 356 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 CLEC10AQ8IUN9 316 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 RELL1Q8IUW5 271 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 PHC3Q8NDX5 983 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 GAL3ST3Q96A11 431 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 RSRP1Q9BUV0 290 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 MIR1-1HGQ9H1L0 117 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 KCNF1Q9H3M0 494 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 GSX1Q9H4S2 264 aaPredicted RBP4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 FAM105AQ9NUU6 356 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 CRIM1Q9NZV1 1036 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 STOML1Q9UBI4 398 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 PCDHA4Q9UN74 947 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 RAXQ9Y2V3 346 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 PCDHGC5Q9Y5F6 944 aa4.54□□□□□ -1.68
FNDC3B-209ENST00000478016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 DYRK3O43781 588 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 NRDCO43847 1150 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 CREB3O43889 395 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 TFE3P19532 575 aaPredicted RBP4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 RXRBP28702 533 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 ZNF76P36508 570 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 ERVK-24P63145 666 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 FOXD4Q12950 439 aaPredicted RBP4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 SGO2Q562F6 1265 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 LDLRAD1Q5T700 205 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 ZNF662Q6ZS27 426 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 ERMP1Q7Z2K6 904 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 FBLIM1Q8WUP2 373 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 TMEM74Q96NL1 305 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 FANCD2OSQ96PS1 177 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 TSPAN18Q96SJ8 248 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 FAM83CQ9BQN1 747 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 PIDD1Q9HB75 910 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 METTL5Q9NRN9 209 aaKnown RBP4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 GGT7Q9UJ14 662 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 TLR6Q9Y2C9 796 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 NUB1Q9Y5A7 615 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 PCDHB5Q9Y5E4 795 aa4.53□□□□□ -1.68
FNDC3B-209ENST00000478016 CECR2Q9BXF3 1484 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 CCDC194A0A1B0GVG4 234 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 FAM95CA0A1B0GW59 222 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 F6X3S4 739 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 K7ELQ4 463 aaPredicted RBP4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 SCAMP3O14828 347 aaKnown RBP4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 RAB6AP20340 208 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 GBP2P32456 591 aaPredicted RBP4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 FANCCQ00597 558 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 LMNB2Q03252 620 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 PTPN11Q06124 597 aaPredicted RBP4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 CAMK2GQ13555 558 aaPredicted RBP4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 SEPT6Q14141 434 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 MAP7Q14244 749 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 CDPF1Q6NVV7 123 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 HDXQ7Z353 690 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 CCDC84Q86UT8 332 aaPredicted RBP4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 TRIM42Q8IWZ5 723 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 EZH1Q92800 747 aaPredicted RBP4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 ELMO3Q96BJ8 720 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 SENP7Q9BQF6 1050 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 SEMA6BQ9H3T3 888 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 ACSS3Q9H6R3 686 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 C7orf69Q9H7B7 122 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 DISC1Q9NRI5 854 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 KBTBD4Q9NVX7 518 aa4.52□□□□□ -1.69
FNDC3B-209ENST00000478016 HMX2A2RU54 273 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 DCDC2CA8MYV0 355 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 CCER2I3L3R5 266 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 GSC2O15499 205 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 ZRANB2O95218 330 aaKnown RBP eCLIP4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 MAP4K4O95819 1239 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms