RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 NPAS4Q8IUM7 802 aa5.96□□□□□ -1.46
XRN1-211ENST00000477237 ZCCHC4Q9H5U6 513 aa5.96□□□□□ -1.46
XRN1-211ENST00000477237 NPHS2Q9NP85 383 aa5.96□□□□□ -1.46
XRN1-211ENST00000477237 TMEM238LA0A1B0GVL6 79 aa5.95□□□□□ -1.46
XRN1-211ENST00000477237 HNRNPUQ00839 825 aaKnown RBP eCLIP5.95□□□□□ -1.46
XRN1-211ENST00000477237 PRPF40BQ6NWY9 871 aaKnown RBP5.95□□□□□ -1.46
XRN1-211ENST00000477237 ABHD4Q8TB40 342 aa5.95□□□□□ -1.46
XRN1-211ENST00000477237 PRR33A8MZF0 331 aa5.94□□□□□ -1.46
XRN1-211ENST00000477237 NTF4P34130 210 aa5.94□□□□□ -1.46
XRN1-211ENST00000477237 GGNQ86UU5 652 aa5.94□□□□□ -1.46
XRN1-211ENST00000477237 STK35Q8TDR2 534 aa5.94□□□□□ -1.46
XRN1-211ENST00000477237 SLC26A8Q96RN1 970 aa5.94□□□□□ -1.46
XRN1-211ENST00000477237 FOXQ1Q9C009 403 aa5.94□□□□□ -1.46
XRN1-211ENST00000477237 SYN1P17600 705 aa5.93□□□□□ -1.46
XRN1-211ENST00000477237 PPM1JQ5JR12 505 aa5.93□□□□□ -1.46
XRN1-211ENST00000477237 CDKAL1Q5VV42 579 aa5.93□□□□□ -1.46
XRN1-211ENST00000477237 KCNC2Q96PR1 638 aa5.93□□□□□ -1.46
XRN1-211ENST00000477237 ALPK1Q96QP1 1244 aa5.93□□□□□ -1.46
XRN1-211ENST00000477237 PRDM5Q9NQX1 630 aaPredicted RBP5.93□□□□□ -1.46
XRN1-211ENST00000477237 CNTNAP4Q9C0A0 1308 aa5.93□□□□□ -1.46
XRN1-211ENST00000477237 SRFP11831 508 aa5.92□□□□□ -1.46
XRN1-211ENST00000477237 ERVFC1P60507 584 aa5.92□□□□□ -1.46
XRN1-211ENST00000477237 FKBP4Q02790 459 aaKnown RBP eCLIP5.92□□□□□ -1.46
XRN1-211ENST00000477237 ORC1Q13415 861 aa5.92□□□□□ -1.46
XRN1-211ENST00000477237 TTC6Q86TZ1 520 aa5.92□□□□□ -1.46
XRN1-211ENST00000477237 MAPK8IP1Q9UQF2 711 aa5.92□□□□□ -1.46
XRN1-211ENST00000477237 FAM155AB1AL88 458 aaPredicted RBP5.91□□□□□ -1.46
XRN1-211ENST00000477237 H3BS24 57 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 SSFA2P28290 1259 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 SF3B2Q13435 895 aaKnown RBP5.91□□□□□ -1.46
XRN1-211ENST00000477237 NFIXQ14938 502 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 GPBAR1Q8TDU6 330 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 PBXIP1Q96AQ6 731 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 CCDC120Q96HB5 630 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 ANO2Q9NQ90 1003 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 SLAMF8Q9P0V8 285 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 CSADQ9Y600 493 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 ADAMTS20P59510 1910 aa5.91□□□□□ -1.46
XRN1-211ENST00000477237 DNAJC25-GNG10A0A024R161 153 aa5.9□□□□□ -1.46
XRN1-211ENST00000477237 RAC2P15153 192 aa5.9□□□□□ -1.46
XRN1-211ENST00000477237 MAP1SQ66K74 1059 aaPredicted RBP5.9□□□□□ -1.46
XRN1-211ENST00000477237 BAHD1Q8TBE0 780 aaPredicted RBP5.9□□□□□ -1.46
XRN1-211ENST00000477237 DNAJC25Q9H1X3 360 aa5.9□□□□□ -1.46
XRN1-211ENST00000477237 TMEM39AQ9NV64 488 aa5.9□□□□□ -1.46
XRN1-211ENST00000477237 GPN3Q9UHW5 284 aaPredicted RBP5.9□□□□□ -1.46
XRN1-211ENST00000477237 ST14Q9Y5Y6 855 aa5.9□□□□□ -1.46
XRN1-211ENST00000477237 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 CPNE3O75131 537 aaKnown RBP5.89□□□□□ -1.47
XRN1-211ENST00000477237 GADD45BO75293 160 aaPredicted RBP5.89□□□□□ -1.47
XRN1-211ENST00000477237 ARNTP27540 789 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 NFKB2Q00653 900 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 PPP2R3AQ06190 1150 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 SKOR2Q2VWA4 1001 aaPredicted RBP5.89□□□□□ -1.47
XRN1-211ENST00000477237 RALGPS1Q5JS13 557 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 MPRIPQ6WCQ1 1025 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 SULF2Q8IWU5 870 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 MFSD4AQ8N468 514 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 MARCH10Q8NA82 808 aaPredicted RBP5.89□□□□□ -1.47
XRN1-211ENST00000477237 MYLIPQ8WY64 445 aa5.89□□□□□ -1.47
XRN1-211ENST00000477237 SLITRK5O94991 958 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 NEFLP07196 543 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 DLG4P78352 724 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 FGD1P98174 961 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 RING1Q06587 406 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 ZNF211Q13398 564 aaPredicted RBP5.88□□□□□ -1.47
XRN1-211ENST00000477237 GRM2Q14416 872 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 C22orf34Q6ZV56 151 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 ARMCX6Q7L4S7 300 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 PRRT2Q7Z6L0 340 aaPredicted RBP5.88□□□□□ -1.47
XRN1-211ENST00000477237 CCDC74AQ96AQ1 378 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 MCOLN1Q9GZU1 580 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 CACNA2D2Q9NY47 1150 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 RTEL1Q9NZ71 1219 aa5.88□□□□□ -1.47
XRN1-211ENST00000477237 DCDC2CA8MYV0 355 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 TRIM13O60858 407 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 HPXP02790 462 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 HK2P52789 917 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 ZNF252P-AS1Q0IIN9 211 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 C12orf40Q86WS4 652 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 UBE2FQ969M7 185 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 TRAK1Q9UPV9 953 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 CAPN6Q9Y6Q1 641 aa5.87□□□□□ -1.47
XRN1-211ENST00000477237 ABL1P00519 1130 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 TRHRP34981 398 aaPredicted RBP5.86□□□□□ -1.47
XRN1-211ENST00000477237 SFRP5Q5T4F7 317 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 ZBTB37Q5TC79 503 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 DTHD1Q6ZMT9 781 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 THAP5Q7Z6K1 395 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 CXorf38Q8TB03 319 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 ACSBG1Q96GR2 724 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 RNF32Q9H0A6 362 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 PICK1Q9NRD5 415 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 TMEM59LQ9UK28 342 aa5.86□□□□□ -1.47
XRN1-211ENST00000477237 TPX2Q9ULW0 747 aaKnown RBP5.86□□□□□ -1.47
XRN1-211ENST00000477237 MYOCOSA0A1B0GUC4 107 aa5.85□□□□□ -1.47
XRN1-211ENST00000477237 FANCGO15287 622 aa5.85□□□□□ -1.47
XRN1-211ENST00000477237 FCGRTP55899 365 aa5.85□□□□□ -1.47
XRN1-211ENST00000477237 CDC37L1Q7L3B6 337 aa5.85□□□□□ -1.47
XRN1-211ENST00000477237 XYLT2Q9H1B5 865 aa5.85□□□□□ -1.47
XRN1-211ENST00000477237 TMPRSS5Q9H3S3 457 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms