RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 BTDP43251 543 aa21.17■□□□□ 0.98
SREBF1-211ENST00000476994 RHBDL3P58872 404 aa21.17■□□□□ 0.98
SREBF1-211ENST00000476994 IFNL1Q8IU54 200 aa21.17■□□□□ 0.98
SREBF1-211ENST00000476994 CLMNQ96JQ2 1002 aa21.17■□□□□ 0.98
SREBF1-211ENST00000476994 STRBPQ96SI9 672 aaKnown RBP21.17■□□□□ 0.98
SREBF1-211ENST00000476994 TDRD3Q9H7E2 651 aaKnown RBP21.17■□□□□ 0.98
SREBF1-211ENST00000476994 TMOD2Q9NZR1 351 aa21.17■□□□□ 0.98
SREBF1-211ENST00000476994 HPS5Q9UPZ3 1129 aa21.17■□□□□ 0.98
SREBF1-211ENST00000476994 CCDC171Q6TFL3 1326 aa21.17■□□□□ 0.98
SREBF1-211ENST00000476994 SIPA1L1O43166 1804 aa21.16■□□□□ 0.98
SREBF1-211ENST00000476994 FBXO46Q6PJ61 603 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-211ENST00000476994 RUFY2Q8WXA3 655 aa21.16■□□□□ 0.98
SREBF1-211ENST00000476994 ARMT1Q9H993 441 aa21.16■□□□□ 0.98
SREBF1-211ENST00000476994 AATFQ9NY61 560 aaKnown RBP eCLIP21.16■□□□□ 0.981e-7■□□□□ 8.1
SREBF1-211ENST00000476994 MAGEB6P1A0A0J9YX57 407 aa21.15■□□□□ 0.98
SREBF1-211ENST00000476994 USP2O75604 605 aaPredicted RBP21.15■□□□□ 0.98
SREBF1-211ENST00000476994 SEC24BO95487 1268 aa21.15■□□□□ 0.98
SREBF1-211ENST00000476994 TCP10L2B9ZVM9 353 aa21.14■□□□□ 0.97
SREBF1-211ENST00000476994 CASC1Q6TDU7 716 aa21.14■□□□□ 0.97
SREBF1-211ENST00000476994 SH3RF3Q8TEJ3 882 aaPredicted RBP21.14■□□□□ 0.97
SREBF1-211ENST00000476994 HOOK2Q96ED9 719 aa21.14■□□□□ 0.97
SREBF1-211ENST00000476994 VPS53Q5VIR6 699 aa21.13■□□□□ 0.97
SREBF1-211ENST00000476994 CDC42EP5Q6NZY7 148 aa21.13■□□□□ 0.97
SREBF1-211ENST00000476994 BACH2Q9BYV9 841 aa21.13■□□□□ 0.97
SREBF1-211ENST00000476994 LSG1Q9H089 658 aaKnown RBP21.13■□□□□ 0.97
SREBF1-211ENST00000476994 CSADQ9Y600 493 aa21.13■□□□□ 0.97
SREBF1-211ENST00000476994 PRKAB2O43741 272 aa21.12■□□□□ 0.97
SREBF1-211ENST00000476994 WDHD1O75717 1129 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-211ENST00000476994 BAG3O95817 575 aa21.12■□□□□ 0.97
SREBF1-211ENST00000476994 CERS3Q8IU89 383 aa21.12■□□□□ 0.97
SREBF1-211ENST00000476994 EPB41L4AQ9HCS5 686 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-211ENST00000476994 GSG1L2A8MUP6 293 aa21.11■□□□□ 0.97
SREBF1-211ENST00000476994 HSPD1P10809 573 aaKnown RBP21.11■□□□□ 0.97
SREBF1-211ENST00000476994 PTH1RQ03431 593 aa21.11■□□□□ 0.97
SREBF1-211ENST00000476994 ERO1AQ96HE7 468 aa21.11■□□□□ 0.97
SREBF1-211ENST00000476994 ELP3Q9H9T3 547 aa21.11■□□□□ 0.97
SREBF1-211ENST00000476994 TNRC18O15417 2968 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-211ENST00000476994 PLCG2P16885 1265 aa21.1■□□□□ 0.97
SREBF1-211ENST00000476994 OPTNQ96CV9 577 aa21.1■□□□□ 0.97
SREBF1-211ENST00000476994 TMEM39BQ9GZU3 492 aa21.1■□□□□ 0.97
SREBF1-211ENST00000476994 TRIM17Q9Y577 477 aa21.1■□□□□ 0.97
SREBF1-211ENST00000476994 MYH8P13535 1937 aa21.1■□□□□ 0.97
SREBF1-211ENST00000476994 RPAP1Q9BWH6 1393 aaPredicted RBP21.1■□□□□ 0.97
SREBF1-211ENST00000476994 IGF2BP3O00425 579 aaKnown RBP eCLIP21.09■□□□□ 0.97
SREBF1-211ENST00000476994 GNAT2P19087 354 aa21.09■□□□□ 0.97
SREBF1-211ENST00000476994 MFAP1P55081 439 aaKnown RBP21.09■□□□□ 0.97
SREBF1-211ENST00000476994 MAP3K9P80192 1104 aa21.09■□□□□ 0.97
SREBF1-211ENST00000476994 SDR42E1Q8WUS8 393 aa21.09■□□□□ 0.97
SREBF1-211ENST00000476994 NOL10Q9BSC4 688 aaKnown RBP21.09■□□□□ 0.97
SREBF1-211ENST00000476994 DSCC1Q9BVC3 393 aa21.09■□□□□ 0.97
SREBF1-211ENST00000476994 R3HDMLQ9H3Y0 253 aa21.09■□□□□ 0.97
SREBF1-211ENST00000476994 USP40Q9NVE5 1235 aa21.09■□□□□ 0.97
SREBF1-211ENST00000476994 SLC4A4Q9Y6R1 1079 aa21.09■□□□□ 0.97
SREBF1-211ENST00000476994 ZMYM6O95789 1325 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 GTF2A2P52657 109 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 NFIAQ12857 509 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 ARHGEF6Q15052 776 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 ALX1Q15699 326 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 TEX11Q8IYF3 940 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 MAP4K1Q92918 833 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 TEPSINQ96N21 525 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 IDI2Q9BXS1 227 aa21.08■□□□□ 0.97
SREBF1-211ENST00000476994 CRNKL1Q9BZJ0 848 aaKnown RBP21.08■□□□□ 0.97
SREBF1-211ENST00000476994 DDX4Q9NQI0 724 aaKnown RBP21.08■□□□□ 0.97
SREBF1-211ENST00000476994 PATL2C9JE40 543 aaKnown RBP21.07■□□□□ 0.96
SREBF1-211ENST00000476994 NPM3O75607 178 aaKnown RBP21.07■□□□□ 0.96
SREBF1-211ENST00000476994 CRHR2Q13324 411 aa21.07■□□□□ 0.96
SREBF1-211ENST00000476994 FKBP1CQ5VVH2 108 aa21.07■□□□□ 0.96
SREBF1-211ENST00000476994 FAM83AQ86UY5 434 aa21.07■□□□□ 0.96
SREBF1-211ENST00000476994 DCP1AQ9NPI6 582 aaPredicted RBP21.07■□□□□ 0.96
SREBF1-211ENST00000476994 ANO2Q9NQ90 1003 aa21.07■□□□□ 0.96
SREBF1-211ENST00000476994 FAM198AQ9UFP1 575 aa21.07■□□□□ 0.96
SREBF1-211ENST00000476994 COL2A1P02458 1487 aaPredicted RBP21.07■□□□□ 0.96
SREBF1-211ENST00000476994 FLT1P17948 1338 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 TESPA1A2RU30 521 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-211ENST00000476994 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
SREBF1-211ENST00000476994 REC8O95072 547 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 CACNB3P54284 484 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 VGLL4Q14135 290 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 DCAF15Q66K64 600 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 GIMAP6Q6P9H5 292 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-211ENST00000476994 IFNL3Q8IZI9 196 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 USP26Q9BXU7 913 aa21.06■□□□□ 0.96
SREBF1-211ENST00000476994 CCL15-CCL14A0A0B4J2E2 113 aa21.05■□□□□ 0.96
SREBF1-211ENST00000476994 GJA5P36382 358 aa21.05■□□□□ 0.96
SREBF1-211ENST00000476994 SP3Q02447 781 aa21.05■□□□□ 0.96
SREBF1-211ENST00000476994 CCL15Q16663 113 aa21.05■□□□□ 0.96
SREBF1-211ENST00000476994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.05■□□□□ 0.96
SREBF1-211ENST00000476994 ATP8A2Q9NTI2 1148 aa21.05■□□□□ 0.96
SREBF1-211ENST00000476994 FGAP02671 866 aa21.04■□□□□ 0.96
SREBF1-211ENST00000476994 OTOP1Q7RTM1 612 aa21.04■□□□□ 0.96
SREBF1-211ENST00000476994 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
SREBF1-211ENST00000476994 OTUD5Q96G74 571 aa21.04■□□□□ 0.96
SREBF1-211ENST00000476994 EFCC1Q9HA90 598 aa21.04■□□□□ 0.96
SREBF1-211ENST00000476994 ZFYVE28Q9HCC9 887 aa21.04■□□□□ 0.96
SREBF1-211ENST00000476994 TAF1CQ15572 869 aaPredicted RBP21.03■□□□□ 0.96
SREBF1-211ENST00000476994 KIAA1211Q6ZU35 1233 aa21.03■□□□□ 0.96
SREBF1-211ENST00000476994 ERO1BQ86YB8 467 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms