RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
HLA-F-224ENST00000475996 STOX1Q6ZVD7 989 aa15.2■□□□□ 0.02
HLA-F-224ENST00000475996 KRT26Q7Z3Y9 468 aa15.2■□□□□ 0.02
HLA-F-224ENST00000475996 SULF1Q8IWU6 871 aa15.2■□□□□ 0.02
HLA-F-224ENST00000475996 SLC44A5Q8NCS7 719 aa15.2■□□□□ 0.02
HLA-F-224ENST00000475996 GPBP1L1Q9HC44 474 aaPredicted RBP15.2■□□□□ 0.02
HLA-F-224ENST00000475996 PGAP2Q9UHJ9 254 aa15.2■□□□□ 0.02
HLA-F-224ENST00000475996 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
HLA-F-224ENST00000475996 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
HLA-F-224ENST00000475996 ATRNL1Q5VV63 1379 aa15.2■□□□□ 0.02
HLA-F-224ENST00000475996 E7EWF7 191 aa15.19■□□□□ 0.02
HLA-F-224ENST00000475996 YY1P25490 414 aa15.19■□□□□ 0.02
HLA-F-224ENST00000475996 RBM25P49756 843 aaKnown RBP15.19■□□□□ 0.02
HLA-F-224ENST00000475996 NBPF12Q5TAG4 269 aaPredicted RBP15.19■□□□□ 0.02
HLA-F-224ENST00000475996 MAP1SQ66K74 1059 aaPredicted RBP15.19■□□□□ 0.02
HLA-F-224ENST00000475996 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
HLA-F-224ENST00000475996 KCNB2Q92953 911 aa15.19■□□□□ 0.02
HLA-F-224ENST00000475996 TEPSINQ96N21 525 aa15.19■□□□□ 0.02
HLA-F-224ENST00000475996 GLIS2Q9BZE0 524 aaPredicted RBP15.19■□□□□ 0.02
HLA-F-224ENST00000475996 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
HLA-F-224ENST00000475996 PI4KBQ9UBF8 816 aa15.19■□□□□ 0.02
HLA-F-224ENST00000475996 PRDM1O75626 825 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 SLC3A2P08195 630 aaKnown RBP15.18■□□□□ 0.02
HLA-F-224ENST00000475996 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 RRP12Q5JTH9 1297 aaKnown RBP15.18■□□□□ 0.02
HLA-F-224ENST00000475996 AKNAD1Q5T1N1 836 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 LDHDQ86WU2 507 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
HLA-F-224ENST00000475996 STAG1Q8WVM7 1258 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 SERPINB13Q9UIV8 391 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 NEDD4P46934 1319 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 ROBO3Q96MS0 1386 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 MYH8P13535 1937 aa15.18■□□□□ 0.02
HLA-F-224ENST00000475996 CDK8P49336 464 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 GABPAQ06546 454 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 MFSD6Q6ZSS7 791 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 DNAJC18Q9H819 358 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 PPP2R3BQ9Y5P8 575 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 PDE4BQ07343 736 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 COL9A3Q14050 684 aaPredicted RBP15.17■□□□□ 0.02
HLA-F-224ENST00000475996 TSGA10IPQ3SY00 556 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 JAKMIP1Q96N16 626 aaKnown RBP15.17■□□□□ 0.02
HLA-F-224ENST00000475996 EHD4Q9H223 541 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
HLA-F-224ENST00000475996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
HLA-F-224ENST00000475996 MKNK2Q9HBH9 465 aa15.17■□□□□ 0.02
HLA-F-224ENST00000475996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
HLA-F-224ENST00000475996 B4E1Z4 1266 aa15.16■□□□□ 0.02
HLA-F-224ENST00000475996 CPA1P15085 419 aa15.16■□□□□ 0.02
HLA-F-224ENST00000475996 ANAPC15P60006 121 aa15.16■□□□□ 0.02
HLA-F-224ENST00000475996 KRT32Q14532 448 aa15.16■□□□□ 0.02
HLA-F-224ENST00000475996 CDC37L1Q7L3B6 337 aa15.16■□□□□ 0.02
HLA-F-224ENST00000475996 FOXP4Q8IVH2 680 aaPredicted RBP15.16■□□□□ 0.02
HLA-F-224ENST00000475996 KIF2CQ99661 725 aa15.16■□□□□ 0.02
HLA-F-224ENST00000475996 CASTP20810 708 aaKnown RBP15.15■□□□□ 0.02
HLA-F-224ENST00000475996 SHMT1P34896 483 aa15.15■□□□□ 0.02
HLA-F-224ENST00000475996 FMR1Q06787 632 aaKnown RBP eCLIP15.15■□□□□ 0.02
HLA-F-224ENST00000475996 TRDNQ13061 729 aa15.15■□□□□ 0.02
HLA-F-224ENST00000475996 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
HLA-F-224ENST00000475996 CDCA5Q96FF9 252 aa15.15■□□□□ 0.02
HLA-F-224ENST00000475996 SWAP70Q9UH65 585 aa15.15■□□□□ 0.02
HLA-F-224ENST00000475996 FZD1Q9UP38 647 aa15.15■□□□□ 0.02
HLA-F-224ENST00000475996 SSC5DA1L4H1 1573 aa15.15■□□□□ 0.02
HLA-F-224ENST00000475996 TRAF5O00463 557 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 KIF3CO14782 793 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 ORC4O43929 436 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 RANBP6O60518 1105 aaKnown RBP15.14■□□□□ 0.01
HLA-F-224ENST00000475996 RASA1P20936 1047 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 PRKG1Q13976 671 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 FAM47AQ5JRC9 791 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 METTL16Q86W50 562 aaKnown RBP15.14■□□□□ 0.01
HLA-F-224ENST00000475996 NCOA7Q8NI08 942 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 NEK1Q96PY6 1258 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 UPF3BQ9BZI7 483 aaKnown RBP15.14■□□□□ 0.01
HLA-F-224ENST00000475996 CNNM2Q9H8M5 875 aa15.14■□□□□ 0.01
HLA-F-224ENST00000475996 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
HLA-F-224ENST00000475996 KDM4AO75164 1064 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 FGRP09769 529 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 PCP11498 1178 aaKnown RBP15.13■□□□□ 0.01
HLA-F-224ENST00000475996 SUPT20HL1Q3ZLR7 823 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 CYB5R4Q7L1T6 521 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 CHST3Q7LGC8 479 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 MB21D2Q8IYB1 491 aaPredicted RBP15.13■□□□□ 0.01
HLA-F-224ENST00000475996 ZNF444Q8N0Y2 327 aaPredicted RBP15.13■□□□□ 0.01
HLA-F-224ENST00000475996 TCEANC2Q96MN5 208 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 KRT23Q9C075 422 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 ZNF287Q9HBT7 754 aa15.13■□□□□ 0.01
HLA-F-224ENST00000475996 TBC1D12O60347 775 aa15.12■□□□□ 0.01
HLA-F-224ENST00000475996 GDF11O95390 407 aa15.12■□□□□ 0.01
HLA-F-224ENST00000475996 PSMA5P28066 241 aa15.12■□□□□ 0.01
HLA-F-224ENST00000475996 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
HLA-F-224ENST00000475996 SHROOM1Q2M3G4 852 aaPredicted RBP15.12■□□□□ 0.01
HLA-F-224ENST00000475996 DCAF15Q66K64 600 aa15.12■□□□□ 0.01
HLA-F-224ENST00000475996 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
HLA-F-224ENST00000475996 ZNF784Q8NCA9 323 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms