RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 ATF7IPQ6VMQ6 1270 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 UBE2Q1Q7Z7E8 422 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 CCDC84Q86UT8 332 aaPredicted RBP13.34□□□□□ -0.27
CDRT1-205ENST00000475944 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
CDRT1-205ENST00000475944 UNC93B1Q9H1C4 597 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 LRP2BPQ9P2M1 347 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
CDRT1-205ENST00000475944 CCER2I3L3R5 266 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 FARP2O94887 1054 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-205ENST00000475944 SGPL1O95470 568 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 INHAP05111 366 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 ELNP15502 786 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 CAP2P40123 477 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 MCAMP43121 646 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 SPP2Q13103 211 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 TREML2Q5T2D2 321 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 TBC1D9Q6ZT07 1266 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 ZNF280CQ8ND82 737 aa13.33□□□□□ -0.28
CDRT1-205ENST00000475944 FRAT1Q92837 279 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-205ENST00000475944 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
CDRT1-205ENST00000475944 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
CDRT1-205ENST00000475944 PNMA6EA0A0J9YXQ4 647 aa13.32□□□□□ -0.28
CDRT1-205ENST00000475944 USP17L5A8MUK1 530 aa13.32□□□□□ -0.28
CDRT1-205ENST00000475944 PLCG2P16885 1265 aa13.32□□□□□ -0.28
CDRT1-205ENST00000475944 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
CDRT1-205ENST00000475944 DHX36Q9H2U1 1008 aaKnown RBP13.32□□□□□ -0.28
CDRT1-205ENST00000475944 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
CDRT1-205ENST00000475944 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
CDRT1-205ENST00000475944 ATAD5Q96QE3 1844 aa13.32□□□□□ -0.28
CDRT1-205ENST00000475944 MAST2Q6P0Q8 1798 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 BAG3O95817 575 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
CDRT1-205ENST00000475944 HMGCS2P54868 508 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 SH3D19Q5HYK7 790 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 NAA16Q6N069 864 aaPredicted RBP13.31□□□□□ -0.28
CDRT1-205ENST00000475944 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 DEFB118Q96PH6 123 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 GPR108Q9NPR9 543 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
CDRT1-205ENST00000475944 CCDC158Q5M9N0 1113 aa13.3□□□□□ -0.28
CDRT1-205ENST00000475944 SH3RF3Q8TEJ3 882 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-205ENST00000475944 ASCC2Q9H1I8 757 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-205ENST00000475944 PAK6Q9NQU5 681 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-205ENST00000475944 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
CDRT1-205ENST00000475944 TNNQ9UQP3 1299 aa13.3□□□□□ -0.28
CDRT1-205ENST00000475944 EVI5O60447 810 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 IGSF3O75054 1194 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 BCAR3O75815 825 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 ASNSP08243 561 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
CDRT1-205ENST00000475944 TNNI3KQ59H18 835 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 TRIM34Q9BYJ4 488 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 AATFQ9NY61 560 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDRT1-205ENST00000475944 TMOD4Q9NZQ9 345 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 FPGT-TNNI3KV9GXZ4 949 aa13.29□□□□□ -0.28
CDRT1-205ENST00000475944 ZBTB7BO15156 539 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-205ENST00000475944 HMGCRP04035 888 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 PPP4CP60510 307 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 IRX3P78415 501 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-205ENST00000475944 POLA2Q14181 598 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 RRP1BQ14684 758 aaKnown RBP13.28□□□□□ -0.28
CDRT1-205ENST00000475944 ZKSCAN2Q63HK3 967 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 CRACR2BQ8N4Y2 399 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-205ENST00000475944 TMEM57Q8N5G2 664 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 TGFBRAP1Q8WUH2 860 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 WDR18Q9BV38 432 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 CRISPLD2Q9H0B8 497 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDRT1-205ENST00000475944 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 GINM1Q9NU53 330 aa13.28□□□□□ -0.28
CDRT1-205ENST00000475944 BACE1P56817 501 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 MTMR2Q13614 643 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 NECAB2Q7Z6G3 386 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-205ENST00000475944 MAPKAPK5Q8IW41 473 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 SSH3Q8TE77 659 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 ZNF512BQ96KM6 892 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-205ENST00000475944 DBNDD2Q9BQY9 259 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 PRO3102Q9H379 93 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 MORF4L1Q9UBU8 362 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 FLT1P17948 1338 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 SIPA1L1O43166 1804 aa13.27□□□□□ -0.29
CDRT1-205ENST00000475944 A0A1W2PPC1 479 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 C19orf81C9J6K1 198 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 USP17L10C9JJH3 530 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 SURF6O75683 361 aaKnown RBP13.26□□□□□ -0.29
CDRT1-205ENST00000475944 CYP2E1P05181 493 aaPredicted RBP13.26□□□□□ -0.29
CDRT1-205ENST00000475944 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 HOXA7P31268 230 aaPredicted RBP13.26□□□□□ -0.29
CDRT1-205ENST00000475944 ATP8B2P98198 1209 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
CDRT1-205ENST00000475944 RPTORQ8N122 1335 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 ANKLE1Q8NAG6 615 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 PAWRQ96IZ0 340 aaKnown RBP13.26□□□□□ -0.29
CDRT1-205ENST00000475944 HMX1Q9NP08 348 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms