RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.6□□□□□ -0.394e-8■■■■■ 32.9
PTP4A2-204ENST00000475464 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
PTP4A2-204ENST00000475464 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
PTP4A2-204ENST00000475464 HMGCS2P54868 508 aa12.59□□□□□ -0.39
PTP4A2-204ENST00000475464 RHBDL3P58872 404 aa12.59□□□□□ -0.39
PTP4A2-204ENST00000475464 MEIS3Q99687 375 aa12.59□□□□□ -0.39
PTP4A2-204ENST00000475464 OSBPL5Q9H0X9 879 aaPredicted RBP12.59□□□□□ -0.39
PTP4A2-204ENST00000475464 RFX7Q2KHR2 1363 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 HMGCRP04035 888 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 CAP2P40123 477 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 TBC1D9Q6ZT07 1266 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 C7orf61Q8IZ16 206 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 DIS3LQ8TF46 1054 aaKnown RBP12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 LRCH3Q96II8 777 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 AS3MTQ9HBK9 375 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
PTP4A2-204ENST00000475464 DLL1O00548 723 aa12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 SOX1O00570 391 aaPredicted RBP12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 GNAI3P08754 354 aa12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 ANKLE1Q8NAG6 615 aa12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 NSUN4Q96CB9 384 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 ZMYND8Q9ULU4 1186 aaPredicted RBP12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 RPTORQ8N122 1335 aa12.57□□□□□ -0.4
PTP4A2-204ENST00000475464 COL6A3P12111 3177 aa12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 CYP2B6P20813 491 aa12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 TRIM32Q13049 653 aa12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 PI16Q6UXB8 463 aa12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 TMOD4Q9NZQ9 345 aa12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
PTP4A2-204ENST00000475464 G3BP1Q13283 466 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTP4A2-204ENST00000475464 MTMR2Q13614 643 aa12.55□□□□□ -0.4
PTP4A2-204ENST00000475464 RRP1BQ14684 758 aaKnown RBP12.55□□□□□ -0.4
PTP4A2-204ENST00000475464 SH3RF3Q8TEJ3 882 aaPredicted RBP12.55□□□□□ -0.4
PTP4A2-204ENST00000475464 C11orf49Q9H6J7 331 aa12.55□□□□□ -0.4
PTP4A2-204ENST00000475464 PI4KBQ9UBF8 816 aa12.55□□□□□ -0.4
PTP4A2-204ENST00000475464 HERC5Q9UII4 1024 aaKnown RBP12.55□□□□□ -0.4
PTP4A2-204ENST00000475464 BAG3O95817 575 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 SYN1P17600 705 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 BACE1P56817 501 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 GPRC5AQ8NFJ5 357 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 P2RX7Q99572 595 aaKnown RBP12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 GDF15Q99988 308 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
PTP4A2-204ENST00000475464 MYH13Q9UKX3 1938 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 ASNSP08243 561 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 PLCG2P16885 1265 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 ARID4AP29374 1257 aaPredicted RBP12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 BMP8BP34820 402 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 MAPKAPK5Q8IW41 473 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 CRACR2BQ8N4Y2 399 aaPredicted RBP12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 TRIB2Q92519 343 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 CWC22Q9HCG8 908 aaKnown RBP12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 AATFQ9NY61 560 aaKnown RBP eCLIP12.53□□□□□ -0.43e-7■□□□□ 10.4
PTP4A2-204ENST00000475464 MORF4L1Q9UBU8 362 aa12.53□□□□□ -0.4
PTP4A2-204ENST00000475464 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.4
PTP4A2-204ENST00000475464 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 USP17L10C9JJH3 530 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 PEX10O60683 326 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 GNAI2P04899 355 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 MCAMP43121 646 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 RARSP54136 660 aaKnown RBP12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 HERVK_113P62684 666 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 MTX1Q13505 466 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 TTC39AQ5SRH9 613 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 FOXP4Q8IVH2 680 aaPredicted RBP12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 DEFB123Q8N688 67 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 TGFBRAP1Q8WUH2 860 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 SOCS4Q8WXH5 440 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 ARHGAP45Q92619 1136 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 OGDHLQ9ULD0 1010 aa12.52□□□□□ -0.41
PTP4A2-204ENST00000475464 DOCK2Q92608 1830 aa12.51□□□□□ -0.41
PTP4A2-204ENST00000475464 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
PTP4A2-204ENST00000475464 GDF11O95390 407 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms