RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 GPR153Q6NV75 609 aa15.61■□□□□ 0.09
SKA3-206ENST00000475251 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
SKA3-206ENST00000475251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.61■□□□□ 0.09
SKA3-206ENST00000475251 COPRSQ9NQ92 184 aa15.61■□□□□ 0.09
SKA3-206ENST00000475251 STAP2Q9UGK3 403 aa15.61■□□□□ 0.09
SKA3-206ENST00000475251 AKAP2Q9Y2D5 859 aa15.61■□□□□ 0.09
SKA3-206ENST00000475251 GPR75-ASB3A0A0A6YYF3 556 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 LDHCP07864 332 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 GSTO1P78417 241 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 RASGRF1Q13972 1273 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
SKA3-206ENST00000475251 ZNF280CQ8ND82 737 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 NBPF3Q9H094 633 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 AS3MTQ9HBK9 375 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 HMX1Q9NP08 348 aaPredicted RBP15.6■□□□□ 0.09
SKA3-206ENST00000475251 DDX4Q9NQI0 724 aaKnown RBP15.6■□□□□ 0.09
SKA3-206ENST00000475251 SMC4Q9NTJ3 1288 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 RPTORQ8N122 1335 aa15.6■□□□□ 0.09
SKA3-206ENST00000475251 COL2A1P02458 1487 aaPredicted RBP15.59■□□□□ 0.09
SKA3-206ENST00000475251 ADORA1P30542 326 aa15.59■□□□□ 0.09
SKA3-206ENST00000475251 TREML2Q5T2D2 321 aa15.59■□□□□ 0.09
SKA3-206ENST00000475251 LOC285556D6RIA3 1793 aa15.59■□□□□ 0.09
SKA3-206ENST00000475251 SOX1O00570 391 aaPredicted RBP15.58■□□□□ 0.08
SKA3-206ENST00000475251 MECOMQ03112 1051 aa15.58■□□□□ 0.08
SKA3-206ENST00000475251 SPP2Q13103 211 aa15.58■□□□□ 0.08
SKA3-206ENST00000475251 C7orf61Q8IZ16 206 aa15.58■□□□□ 0.08
SKA3-206ENST00000475251 LRCH3Q96II8 777 aa15.58■□□□□ 0.08
SKA3-206ENST00000475251 GDF15Q99988 308 aa15.58■□□□□ 0.08
SKA3-206ENST00000475251 A0A1B0GUL7 405 aa15.57■□□□□ 0.08
SKA3-206ENST00000475251 HMGCS2P54868 508 aa15.57■□□□□ 0.08
SKA3-206ENST00000475251 RHBDL3P58872 404 aa15.57■□□□□ 0.08
SKA3-206ENST00000475251 CCDC84Q86UT8 332 aaPredicted RBP15.57■□□□□ 0.08
SKA3-206ENST00000475251 DIS3LQ8TF46 1054 aaKnown RBP15.57■□□□□ 0.08
SKA3-206ENST00000475251 API5Q9BZZ5 524 aaKnown RBP15.57■□□□□ 0.08
SKA3-206ENST00000475251 C11orf49Q9H6J7 331 aa15.57■□□□□ 0.08
SKA3-206ENST00000475251 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.57■□□□□ 0.08
SKA3-206ENST00000475251 HERC5Q9UII4 1024 aaKnown RBP15.57■□□□□ 0.08
SKA3-206ENST00000475251 PA2G4Q9UQ80 394 aaKnown RBP15.57■□□□□ 0.08
SKA3-206ENST00000475251 USP17L5A8MUK1 530 aa15.56■□□□□ 0.08
SKA3-206ENST00000475251 CAP2P40123 477 aa15.56■□□□□ 0.08
SKA3-206ENST00000475251 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
SKA3-206ENST00000475251 TIMM10P62072 90 aa15.56■□□□□ 0.08
SKA3-206ENST00000475251 SH3D19Q5HYK7 790 aa15.56■□□□□ 0.08
SKA3-206ENST00000475251 TRMT44Q8IYL2 757 aaKnown RBP15.56■□□□□ 0.08
SKA3-206ENST00000475251 SOCS4Q8WXH5 440 aa15.56■□□□□ 0.08
SKA3-206ENST00000475251 XAGE2Q96GT9 111 aa15.56■□□□□ 0.08
SKA3-206ENST00000475251 NOL10Q9BSC4 688 aaKnown RBP15.56■□□□□ 0.08
SKA3-206ENST00000475251 ASCC2Q9H1I8 757 aaPredicted RBP15.56■□□□□ 0.08
SKA3-206ENST00000475251 DOCK3Q8IZD9 2030 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 ALPK3Q96L96 1907 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 ATAD5Q96QE3 1844 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 CT47B1P0C2W7 299 aaPredicted RBP15.55■□□□□ 0.08
SKA3-206ENST00000475251 IRX3P78415 501 aaPredicted RBP15.55■□□□□ 0.08
SKA3-206ENST00000475251 SLFN5Q08AF3 891 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 LRIT3Q3SXY7 679 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 GORABQ5T7V8 394 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 DHX36Q9H2U1 1008 aaKnown RBP15.55■□□□□ 0.08
SKA3-206ENST00000475251 TMOD4Q9NZQ9 345 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 MORF4L1Q9UBU8 362 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 GJD2Q9UKL4 321 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 OGDHLQ9ULD0 1010 aa15.55■□□□□ 0.08
SKA3-206ENST00000475251 ZMYND8Q9ULU4 1186 aaPredicted RBP15.55■□□□□ 0.08
SKA3-206ENST00000475251 FAM196BA6NMK8 535 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 ASNSP08243 561 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 SLURP2P0DP57 97 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 PDE3AQ14432 1141 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 TDHQ8IZJ6 230 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 DEFB123Q8N688 67 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 SPATA5Q8NB90 893 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 NSUN4Q96CB9 384 aaKnown RBP15.54■□□□□ 0.08
SKA3-206ENST00000475251 NUDT12Q9BQG2 462 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 RAI14Q9P0K7 980 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 PI4KBQ9UBF8 816 aa15.54■□□□□ 0.08
SKA3-206ENST00000475251 DDX60LQ5H9U9 1706 aaKnown RBP15.54■□□□□ 0.08
SKA3-206ENST00000475251 SRGAP3O43295 1099 aa15.53■□□□□ 0.08
SKA3-206ENST00000475251 GNAI3P08754 354 aa15.53■□□□□ 0.08
SKA3-206ENST00000475251 XRCC5P13010 732 aaKnown RBP15.53■□□□□ 0.08
SKA3-206ENST00000475251 CCAR1Q8IX12 1150 aaKnown RBP15.53■□□□□ 0.08
SKA3-206ENST00000475251 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
SKA3-206ENST00000475251 GPRC5AQ8NFJ5 357 aa15.53■□□□□ 0.08
SKA3-206ENST00000475251 GTF3C2Q8WUA4 911 aaPredicted RBP15.53■□□□□ 0.08
SKA3-206ENST00000475251 NEUROD6Q96NK8 337 aa15.53■□□□□ 0.08
SKA3-206ENST00000475251 WDR18Q9BV38 432 aa15.53■□□□□ 0.08
SKA3-206ENST00000475251 GINM1Q9NU53 330 aa15.53■□□□□ 0.08
SKA3-206ENST00000475251 C19orf81C9J6K1 198 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 BAG3O95817 575 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.08
SKA3-206ENST00000475251 PLCG2P16885 1265 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 CYP2B6P20813 491 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 MAPK4P31152 587 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 HOXA7P31268 230 aaPredicted RBP15.52■□□□□ 0.08
SKA3-206ENST00000475251 MAGEA10P43363 369 aaPredicted RBP15.52■□□□□ 0.08
SKA3-206ENST00000475251 TFCP2Q12800 502 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 MTMR2Q13614 643 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 MAP3K21Q5TCX8 1036 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 TRIB2Q92519 343 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 TRIM34Q9BYJ4 488 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 UBE2OQ9C0C9 1292 aaKnown RBP15.52■□□□□ 0.08
SKA3-206ENST00000475251 HMG20BQ9P0W2 317 aa15.52■□□□□ 0.08
SKA3-206ENST00000475251 NOB1Q9ULX3 412 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms