RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 CLUAP1Q96AJ1 413 aa30.68■■■□□ 2.5
TMEM54-205ENST00000475208 UNC93B1Q9H1C4 597 aa30.68■■■□□ 2.5
TMEM54-205ENST00000475208 UQCRFS1P1P0C7P4 283 aa30.67■■■□□ 2.5
TMEM54-205ENST00000475208 UBE2Q1Q7Z7E8 422 aa30.67■■■□□ 2.5
TMEM54-205ENST00000475208 TEX11Q8IYF3 940 aa30.67■■■□□ 2.5
TMEM54-205ENST00000475208 ANKRD13CQ8N6S4 541 aa30.67■■■□□ 2.5
TMEM54-205ENST00000475208 PNMA3Q9UL41 463 aa30.67■■■□□ 2.5
TMEM54-205ENST00000475208 ELNP15502 786 aa30.66■■■□□ 2.5
TMEM54-205ENST00000475208 U2AF1L4Q8WU68 220 aaKnown RBP30.66■■■□□ 2.5
TMEM54-205ENST00000475208 LRP2BPQ9P2M1 347 aa30.66■■■□□ 2.5
TMEM54-205ENST00000475208 SPP2Q13103 211 aa30.65■■■□□ 2.5
TMEM54-205ENST00000475208 IRF5Q13568 498 aa30.65■■■□□ 2.5
TMEM54-205ENST00000475208 PROCA1Q8NCQ7 364 aaPredicted RBP30.65■■■□□ 2.5
TMEM54-205ENST00000475208 LOC285556D6RIA3 1793 aa30.64■■■□□ 2.5
TMEM54-205ENST00000475208 ATAD5Q96QE3 1844 aa30.64■■■□□ 2.5
TMEM54-205ENST00000475208 INHAP05111 366 aa30.64■■■□□ 2.5
TMEM54-205ENST00000475208 ZNF280CQ8ND82 737 aa30.64■■■□□ 2.5
TMEM54-205ENST00000475208 PXYLP1Q8TE99 480 aa30.64■■■□□ 2.5
TMEM54-205ENST00000475208 HTATIP2Q9BUP3 242 aa30.64■■■□□ 2.5
TMEM54-205ENST00000475208 FARP2O94887 1054 aaPredicted RBP30.63■■■□□ 2.49
TMEM54-205ENST00000475208 CAP2P40123 477 aa30.63■■■□□ 2.49
TMEM54-205ENST00000475208 RRP1BQ14684 758 aaKnown RBP30.63■■■□□ 2.49
TMEM54-205ENST00000475208 FAM110CQ1W6H9 321 aa30.63■■■□□ 2.49
TMEM54-205ENST00000475208 CHRDL2Q6WN34 429 aa30.63■■■□□ 2.49
TMEM54-205ENST00000475208 SH3RF3Q8TEJ3 882 aaPredicted RBP30.63■■■□□ 2.49
TMEM54-205ENST00000475208 NOL10Q9BSC4 688 aaKnown RBP30.63■■■□□ 2.49
TMEM54-205ENST00000475208 TBC1D2Q9BYX2 928 aa30.63■■■□□ 2.49
TMEM54-205ENST00000475208 MAST2Q6P0Q8 1798 aa30.62■■■□□ 2.49
TMEM54-205ENST00000475208 HMGCS2P54868 508 aa30.62■■■□□ 2.49
TMEM54-205ENST00000475208 COA7Q96BR5 231 aa30.62■■■□□ 2.49
TMEM54-205ENST00000475208 TAOK2Q9UL54 1235 aa30.62■■■□□ 2.49
TMEM54-205ENST00000475208 TRIOBPQ9H2D6 2365 aa30.62■■■□□ 2.49
TMEM54-205ENST00000475208 SGPL1O95470 568 aa30.61■■■□□ 2.49
TMEM54-205ENST00000475208 TMEM57Q8N5G2 664 aa30.61■■■□□ 2.49
TMEM54-205ENST00000475208 SNRKQ9NRH2 765 aa30.61■■■□□ 2.49
TMEM54-205ENST00000475208 HERC5Q9UII4 1024 aaKnown RBP30.61■■■□□ 2.49
TMEM54-205ENST00000475208 USP17L5A8MUK1 530 aa30.6■■■□□ 2.49
TMEM54-205ENST00000475208 TTC39AQ5SRH9 613 aa30.6■■■□□ 2.49
TMEM54-205ENST00000475208 NAA16Q6N069 864 aaPredicted RBP30.6■■■□□ 2.49
TMEM54-205ENST00000475208 AATFQ9NY61 560 aaKnown RBP eCLIP30.6■■■□□ 2.49
TMEM54-205ENST00000475208 PABPC4Q13310 644 aaKnown RBP eCLIP30.59■■■□□ 2.49
TMEM54-205ENST00000475208 TNNI3KQ59H18 835 aa30.59■■■□□ 2.49
TMEM54-205ENST00000475208 DBNDD2Q9BQY9 259 aa30.59■■■□□ 2.49
TMEM54-205ENST00000475208 GPR108Q9NPR9 543 aa30.59■■■□□ 2.49
TMEM54-205ENST00000475208 FPGT-TNNI3KV9GXZ4 949 aa30.59■■■□□ 2.49
TMEM54-205ENST00000475208 BAG3O95817 575 aa30.58■■■□□ 2.49
TMEM54-205ENST00000475208 GCLCP48506 637 aaPredicted RBP30.58■■■□□ 2.49
TMEM54-205ENST00000475208 POLA2Q14181 598 aa30.58■■■□□ 2.49
TMEM54-205ENST00000475208 DEFB118Q96PH6 123 aa30.58■■■□□ 2.49
TMEM54-205ENST00000475208 AS3MTQ9HBK9 375 aa30.58■■■□□ 2.49
TMEM54-205ENST00000475208 PI4KBQ9UBF8 816 aa30.58■■■□□ 2.49
TMEM54-205ENST00000475208 SIPA1L1O43166 1804 aa30.58■■■□□ 2.49
TMEM54-205ENST00000475208 PLCG2P16885 1265 aa30.57■■■□□ 2.48
TMEM54-205ENST00000475208 OS9Q13438 667 aaPredicted RBP30.57■■■□□ 2.48
TMEM54-205ENST00000475208 CCDC158Q5M9N0 1113 aa30.57■■■□□ 2.48
TMEM54-205ENST00000475208 ZKSCAN2Q63HK3 967 aa30.57■■■□□ 2.48
TMEM54-205ENST00000475208 DHX36Q9H2U1 1008 aaKnown RBP30.57■■■□□ 2.48
TMEM54-205ENST00000475208 DOCK3Q8IZD9 2030 aa30.57■■■□□ 2.48
TMEM54-205ENST00000475208 SH3D19Q5HYK7 790 aa30.56■■■□□ 2.48
TMEM54-205ENST00000475208 ASCC2Q9H1I8 757 aaPredicted RBP30.56■■■□□ 2.48
TMEM54-205ENST00000475208 PAK6Q9NQU5 681 aaPredicted RBP30.56■■■□□ 2.48
TMEM54-205ENST00000475208 RBM27Q9P2N5 1060 aaKnown RBP30.56■■■□□ 2.48
TMEM54-205ENST00000475208 TFRCP02786 760 aaKnown RBP30.55■■■□□ 2.48
TMEM54-205ENST00000475208 ADGRA1Q86SQ6 560 aa30.55■■■□□ 2.48
TMEM54-205ENST00000475208 MAPKAPK5Q8IW41 473 aa30.55■■■□□ 2.48
TMEM54-205ENST00000475208 SSH3Q8TE77 659 aa30.55■■■□□ 2.48
TMEM54-205ENST00000475208 TGFBRAP1Q8WUH2 860 aa30.55■■■□□ 2.48
TMEM54-205ENST00000475208 NR2E3Q9Y5X4 410 aa30.55■■■□□ 2.48
TMEM54-205ENST00000475208 FLT1P17948 1338 aa30.54■■■□□ 2.48
TMEM54-205ENST00000475208 CYP2E1P05181 493 aaPredicted RBP30.54■■■□□ 2.48
TMEM54-205ENST00000475208 PPP4CP60510 307 aa30.54■■■□□ 2.48
TMEM54-205ENST00000475208 SURF6O75683 361 aaKnown RBP30.53■■■□□ 2.48
TMEM54-205ENST00000475208 ATP8B2P98198 1209 aa30.53■■■□□ 2.48
TMEM54-205ENST00000475208 MTMR2Q13614 643 aa30.53■■■□□ 2.48
TMEM54-205ENST00000475208 WDR18Q9BV38 432 aa30.53■■■□□ 2.48
TMEM54-205ENST00000475208 C1orf115Q9H7X2 142 aa30.53■■■□□ 2.48
TMEM54-205ENST00000475208 DNAJC18Q9H819 358 aa30.53■■■□□ 2.48
TMEM54-205ENST00000475208 ASNSP08243 561 aa30.52■■■□□ 2.48
TMEM54-205ENST00000475208 CAPN2P17655 700 aa30.52■■■□□ 2.48
TMEM54-205ENST00000475208 CDK5RAP2Q96SN8 1893 aa30.52■■■□□ 2.48
TMEM54-205ENST00000475208 ZBTB7BO15156 539 aaPredicted RBP30.51■■■□□ 2.47
TMEM54-205ENST00000475208 ZAP70P43403 619 aa30.51■■■□□ 2.47
TMEM54-205ENST00000475208 JAG1P78504 1218 aa30.51■■■□□ 2.47
TMEM54-205ENST00000475208 CRACR2BQ8N4Y2 399 aaPredicted RBP30.51■■■□□ 2.47
TMEM54-205ENST00000475208 TRIM34Q9BYJ4 488 aa30.51■■■□□ 2.47
TMEM54-205ENST00000475208 CRISPLD2Q9H0B8 497 aa30.51■■■□□ 2.47
TMEM54-205ENST00000475208 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.51■■■□□ 2.47
TMEM54-205ENST00000475208 TMOD4Q9NZQ9 345 aa30.51■■■□□ 2.47
TMEM54-205ENST00000475208 FOCADQ5VW36 1801 aa30.51■■■□□ 2.47
TMEM54-205ENST00000475208 RANBP2P49792 3224 aaKnown RBP30.51■■■□□ 2.47
TMEM54-205ENST00000475208 BACE1P56817 501 aa30.5■■■□□ 2.47
TMEM54-205ENST00000475208 IRX3P78415 501 aaPredicted RBP30.5■■■□□ 2.47
TMEM54-205ENST00000475208 METTL16Q86W50 562 aaKnown RBP30.5■■■□□ 2.47
TMEM54-205ENST00000475208 ZNF512BQ96KM6 892 aaPredicted RBP30.5■■■□□ 2.47
TMEM54-205ENST00000475208 PIH1D3Q9NQM4 214 aaKnown RBP30.5■■■□□ 2.47
TMEM54-205ENST00000475208 MYO5AQ9Y4I1 1855 aaKnown RBP30.49■■■□□ 2.47
TMEM54-205ENST00000475208 HMGCRP04035 888 aa30.49■■■□□ 2.47
TMEM54-205ENST00000475208 SHROOM1Q2M3G4 852 aaPredicted RBP30.49■■■□□ 2.47
TMEM54-205ENST00000475208 FOXP4Q8IVH2 680 aaPredicted RBP30.49■■■□□ 2.47
TMEM54-205ENST00000475208 MORF4L1Q9UBU8 362 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms