RNA–Protein interactions for RNA: ENST00000472883.1

CDK5RAP2-208, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 389 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-208	ENST00000472883	SH3RF1	Q7Z6J0	888 aa		9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	ARRDC4	Q8NCT1	418 aa		9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	TDRD7	Q8NHU6	1098 aa	Known RBP	9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	MORF4L1	Q9UBU8	362 aa		9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	DDX20	Q9UHI6	824 aa	Known RBP	9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	MYO15A	Q9UKN7	3530 aa		9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	VPS13A	Q96RL7	3174 aa		9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	ACACB	O00763	2458 aa		9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	CHD6	Q8TD26	2715 aa		9.29	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	KIAA0355	O15063	1070 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	ALAD	P13716	330 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	RGS2	P41220	211 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	TRIM60	Q495X7	471 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	CCDC174	Q6PII3	467 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	CCDC129	Q6ZRS4	1044 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	USP6NL	Q92738	828 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	UIMC1	Q96RL1	719 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	PLEKHF1	Q96S99	279 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	APBA2	Q99767	749 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	METTL22	Q9BUU2	404 aa	Predicted RBP	9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	PNN	Q9H307	717 aa	Known RBP	9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	MSRA	Q9UJ68	235 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	MYH2	Q9UKX2	1941 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	UTY	O14607	1347 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	MAST3	O60307	1309 aa		9.28	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	CFAP47	Q6ZTR5	3102 aa		9.27	□□□□□ -0.92
CDK5RAP2-208	ENST00000472883	KBTBD13	C9JR72	458 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	SNAP23	O00161	211 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TAF5L	O75529	589 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CLTB	P09497	229 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	RAG1	P15918	1043 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	POU3F3	P20264	500 aa	Predicted RBP	9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	MAPK4	P31152	587 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PBX2	P40425	430 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	SKIV2L	Q15477	1246 aa	Known RBP	9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	MFSD14C	Q5VZR4	134 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	APOBEC3H	Q6NTF7	200 aa	Known RBP	9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TBC1D22A	Q8WUA7	517 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PLA2G12B	Q9BX93	195 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	DAGLA	Q9Y4D2	1042 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	GVINP1	Q7Z2Y8	2422 aa		9.27	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TECTA	O75443	2155 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TRIM75P	A6NK02	468 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PHF20L1	A8MW92	1017 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	ITGB8	P26012	769 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TREML2	Q5T2D2	321 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	RASIP1	Q5U651	963 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	HHIPL2	Q6UWX4	724 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	SLC28A3	Q9HAS3	691 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	SUGT1	Q9Y2Z0	365 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	MAPK8IP3	Q9UPT6	1336 aa		9.26	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CTNND1	O60716	968 aa	Known RBP	9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	HIBADH	P31937	336 aa	Known RBP	9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TLE2	Q04725	743 aa		9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	LMOD3	Q0VAK6	560 aa		9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CCL14	Q16627	93 aa		9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	KRT24	Q2M2I5	525 aa		9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	MORN1	Q5T089	497 aa		9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	MICALL1	Q8N3F8	863 aa		9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	9.25	□□□□□ -0.93	4e-12	■■□□□ 11.7
CDK5RAP2-208	ENST00000472883	ASCC2	Q9H1I8	757 aa	Predicted RBP	9.25	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	ANKRD18B	A2A2Z9	1011 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CHL1	O00533	1208 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	GTPBP6	O43824	516 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	RGS20	O76081	388 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	DDX58	O95786	925 aa	Known RBP	9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CSF1R	P07333	972 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	GJC2	Q5T442	439 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	GPRC5A	Q8NFJ5	357 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	HLA-C	Q95604	372 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TBC1D2	Q9BYX2	928 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CD320	Q9NPF0	282 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	ATRNL1	Q5VV63	1379 aa		9.24	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	DMXL1	Q9Y485	3027 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CDK5RAP2	Q96SN8	1893 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	ANKRD11	Q6UB99	2663 aa	Predicted RBP	9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	ZNF292	O60281	2723 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	GRXCR1	A8MXD5	290 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883		H7C1W4	665 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CNGA1	P29973	690 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	MAP3K10	Q02779	954 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	MAP2K5	Q13163	448 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PPIG	Q13427	754 aa	Known RBP eCLIP	9.23	□□□□□ -0.93	6e-10	■■■□□ 17.4
CDK5RAP2-208	ENST00000472883	UBE4A	Q14139	1066 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	CCAR1	Q8IX12	1150 aa	Known RBP	9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PRRX2	Q99811	253 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PHAX	Q9H814	394 aa	Known RBP	9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	LRRFIP2	Q9Y608	721 aa	Known RBP	9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	ZNF236	Q9UL36	1845 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PLXNA3	P51805	1871 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	NCOR2	Q9Y618	2525 aa		9.23	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	KMT2E	Q8IZD2	1858 aa		9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	FASN	P49327	2511 aa	Known RBP	9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	GLRX3	O76003	335 aa	Known RBP	9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	IGKV5-2	P06315	115 aa		9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	PTPN5	P54829	565 aa		9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	RIPK4	P57078	832 aa		9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	NEXN	Q0ZGT2	675 aa		9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	TCP10	Q12799	353 aa		9.22	□□□□□ -0.93
CDK5RAP2-208	ENST00000472883	GRIK5	Q16478	980 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms