RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PAGE1O75459 146 aa7.25□□□□□ -1.25
RBM39-228ENST00000471635 NEFMP07197 916 aa7.25□□□□□ -1.25
RBM39-228ENST00000471635 P4HBP07237 508 aaKnown RBP7.25□□□□□ -1.25
RBM39-228ENST00000471635 CYP27C1Q4G0S4 372 aa7.25□□□□□ -1.25
RBM39-228ENST00000471635 GRIN3AQ8TCU5 1115 aa7.25□□□□□ -1.25
RBM39-228ENST00000471635 CEP44Q9C0F1 390 aa7.25□□□□□ -1.25
RBM39-228ENST00000471635 SSU72Q9NP77 194 aaKnown RBP7.25□□□□□ -1.25
RBM39-228ENST00000471635 CSADQ9Y600 493 aa7.25□□□□□ -1.25
RBM39-228ENST00000471635 BMP6P22004 513 aa7.24□□□□□ -1.25
RBM39-228ENST00000471635 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
RBM39-228ENST00000471635 ISL2Q96A47 359 aa7.24□□□□□ -1.25
RBM39-228ENST00000471635 PCOLCE2Q9UKZ9 415 aa7.24□□□□□ -1.25
RBM39-228ENST00000471635 PPM1HQ9ULR3 514 aa7.24□□□□□ -1.25
RBM39-228ENST00000471635 SPG7Q9UQ90 795 aa7.24□□□□□ -1.25
RBM39-228ENST00000471635 JAG2Q9Y219 1238 aa7.24□□□□□ -1.25
RBM39-228ENST00000471635 SAMM50Q9Y512 469 aa7.24□□□□□ -1.25
RBM39-228ENST00000471635 GIPC1O14908 333 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 LEFTY1O75610 366 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 USP17L7P0C7H9 530 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 PPM1JQ5JR12 505 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.23□□□□□ -1.25
RBM39-228ENST00000471635 FAM181AQ8N9Y4 354 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 RNF214Q8ND24 703 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 LRRN4CLQ8ND94 238 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 C12orf49Q9H741 205 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 ADAMTS6Q9UKP5 1117 aa7.23□□□□□ -1.25
RBM39-228ENST00000471635 DCDC2CA8MYV0 355 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 LDHBP07195 334 aaKnown RBP7.22□□□□□ -1.25
RBM39-228ENST00000471635 CELA3AP09093 270 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 ERVK-24P63145 666 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 LLGL2Q6P1M3 1020 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 ANKLE2Q86XL3 938 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 PI4K2BQ8TCG2 481 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 PICK1Q9NRD5 415 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 FAM8A1Q9UBU6 413 aa7.22□□□□□ -1.25
RBM39-228ENST00000471635 PATL2C9JE40 543 aaKnown RBP7.21□□□□□ -1.26
RBM39-228ENST00000471635 CD8BP10966 210 aa7.21□□□□□ -1.26
RBM39-228ENST00000471635 BNIP3Q12983 259 aa7.21□□□□□ -1.26
RBM39-228ENST00000471635 RASIP1Q5U651 963 aa7.21□□□□□ -1.26
RBM39-228ENST00000471635 ZSWIM9Q86XI8 627 aa7.21□□□□□ -1.26
RBM39-228ENST00000471635 PLD6Q8N2A8 252 aaKnown RBP7.21□□□□□ -1.26
RBM39-228ENST00000471635 TOP6BLQ8N6T0 577 aa7.21□□□□□ -1.26
RBM39-228ENST00000471635 FLAD1Q8NFF5 587 aa7.21□□□□□ -1.26
RBM39-228ENST00000471635 CACNA2D2Q9NY47 1150 aa7.21□□□□□ -1.26
RBM39-228ENST00000471635 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.21□□□□□ -1.26
RBM39-228ENST00000471635 TRIM37O94972 964 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 LRRC14Q15048 493 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 PCNX4Q63HM2 1172 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 ARHGAP27Q6ZUM4 889 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 C12orf40Q86WS4 652 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 DUSP23Q9BVJ7 150 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 PCDHA4Q9UN74 947 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 TTF2Q9UNY4 1162 aaKnown RBP7.2□□□□□ -1.26
RBM39-228ENST00000471635 U3KQE9 123 aa7.2□□□□□ -1.26
RBM39-228ENST00000471635 MLANAQ16655 118 aa7.19□□□□□ -1.26
RBM39-228ENST00000471635 UBE3DQ7Z6J8 389 aa7.19□□□□□ -1.26
RBM39-228ENST00000471635 NETO1Q8TDF5 533 aa7.19□□□□□ -1.26
RBM39-228ENST00000471635 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
RBM39-228ENST00000471635 VAV3Q9UKW4 847 aa7.19□□□□□ -1.26
RBM39-228ENST00000471635 AEBP1Q8IUX7 1158 aa7.18□□□□□ -1.26
RBM39-228ENST00000471635 ANKRD24Q8TF21 1146 aa7.18□□□□□ -1.26
RBM39-228ENST00000471635 ELMO3Q96BJ8 720 aa7.18□□□□□ -1.26
RBM39-228ENST00000471635 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
RBM39-228ENST00000471635 NTF4P34130 210 aa7.17□□□□□ -1.26
RBM39-228ENST00000471635 KCNMB1Q16558 191 aa7.17□□□□□ -1.26
RBM39-228ENST00000471635 RNF19AQ9NV58 838 aa7.17□□□□□ -1.26
RBM39-228ENST00000471635 CYP8B1Q9UNU6 501 aa7.17□□□□□ -1.26
RBM39-228ENST00000471635 ZNF503-AS2A6NEH8 195 aa7.16□□□□□ -1.26
RBM39-228ENST00000471635 PRPF40AO75400 957 aaKnown RBP7.16□□□□□ -1.26
RBM39-228ENST00000471635 ITIH2P19823 946 aa7.16□□□□□ -1.26
RBM39-228ENST00000471635 GNA15P30679 374 aa7.16□□□□□ -1.26
RBM39-228ENST00000471635 PRKCQQ04759 706 aa7.16□□□□□ -1.26
RBM39-228ENST00000471635 ZBTB37Q5TC79 503 aa7.16□□□□□ -1.26
RBM39-228ENST00000471635 FRMD6Q96NE9 622 aa7.16□□□□□ -1.26
RBM39-228ENST00000471635 PRAMEF27A3QJZ7 478 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 ANKRD33BA6NCL7 494 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 FANCGO15287 622 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 CEACAM5P06731 702 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 CD96P40200 585 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 OXCT1P55809 520 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 PTPN11Q06124 597 aaPredicted RBP7.15□□□□□ -1.26
RBM39-228ENST00000471635 RING1Q06587 406 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 INPP5AQ14642 412 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 SND1Q7KZF4 910 aaKnown RBP eCLIP7.15□□□□□ -1.26
RBM39-228ENST00000471635 SV2BQ7L1I2 683 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 CDC37L1Q7L3B6 337 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 AMIGO3Q86WK7 504 aa7.15□□□□□ -1.26
RBM39-228ENST00000471635 CTSWP56202 376 aa7.14□□□□□ -1.27
RBM39-228ENST00000471635 IFI16Q16666 785 aaKnown RBP7.14□□□□□ -1.27
RBM39-228ENST00000471635 EAPPQ56P03 285 aaPredicted RBP7.14□□□□□ -1.27
RBM39-228ENST00000471635 ANGEL2Q5VTE6 544 aaKnown RBP7.14□□□□□ -1.27
RBM39-228ENST00000471635 TTBK2Q6IQ55 1244 aa7.14□□□□□ -1.27
RBM39-228ENST00000471635 SLC23A3Q6PIS1 610 aa7.14□□□□□ -1.27
RBM39-228ENST00000471635 LRFN4Q6PJG9 635 aa7.14□□□□□ -1.27
RBM39-228ENST00000471635 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.14□□□□□ -1.27
RBM39-228ENST00000471635 HEXIM2Q96MH2 286 aaKnown RBP7.14□□□□□ -1.27
RBM39-228ENST00000471635 DUSP9Q99956 384 aaKnown RBP7.14□□□□□ -1.27
RBM39-228ENST00000471635 MKNK2Q9HBH9 465 aa7.14□□□□□ -1.27
RBM39-228ENST00000471635 PRDM10Q9NQV6 1147 aa7.14□□□□□ -1.27
RBM39-228ENST00000471635 PLAGL2Q9UPG8 496 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 260.4 ms