RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 GLIS2Q9BZE0 524 aaPredicted RBP34.31■■■■□ 3.08
SOD1-203ENST00000470944 HLA-DOAP06340 250 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 LAMB1P07942 1786 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 SLC44A5Q8NCS7 719 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 PI4KBQ9UBF8 816 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 SNX14Q9Y5W7 946 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 FAM196BA6NMK8 535 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 MCCP23508 829 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 NBPF12Q5TAG4 269 aaPredicted RBP34.3■■■■□ 3.08
SOD1-203ENST00000470944 RNF20Q5VTR2 975 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 STOX1Q6ZVD7 989 aa34.3■■■■□ 3.08
SOD1-203ENST00000470944 SIPA1L1O43166 1804 aa34.29■■■■□ 3.08
SOD1-203ENST00000470944 LAMA4Q16363 1823 aa34.29■■■■□ 3.08
SOD1-203ENST00000470944 ROBO3Q96MS0 1386 aa34.29■■■■□ 3.08
SOD1-203ENST00000470944 TBC1D32Q96NH3 1257 aa34.29■■■■□ 3.08
SOD1-203ENST00000470944 PPP2R3BQ9Y5P8 575 aa34.29■■■■□ 3.08
SOD1-203ENST00000470944 GABPAQ06546 454 aa34.28■■■■□ 3.08
SOD1-203ENST00000470944 DNAJC18Q9H819 358 aa34.28■■■■□ 3.08
SOD1-203ENST00000470944 SERPINB13Q9UIV8 391 aa34.28■■■■□ 3.08
SOD1-203ENST00000470944 NKX2-3Q8TAU0 364 aa34.27■■■■□ 3.08
SOD1-203ENST00000470944 EHD4Q9H223 541 aa34.27■■■■□ 3.08
SOD1-203ENST00000470944 KIF3CO14782 793 aa34.27■■■■□ 3.08
SOD1-203ENST00000470944 RBM25P49756 843 aaKnown RBP34.27■■■■□ 3.08
SOD1-203ENST00000470944 COL9A3Q14050 684 aaPredicted RBP34.27■■■■□ 3.08
SOD1-203ENST00000470944 ADCK5Q3MIX3 580 aa34.27■■■■□ 3.08
SOD1-203ENST00000470944 CDC37L1Q7L3B6 337 aa34.27■■■■□ 3.08
SOD1-203ENST00000470944 E7EWF7 191 aa34.26■■■■□ 3.07
SOD1-203ENST00000470944 PRDM1O75626 825 aa34.26■■■■□ 3.07
SOD1-203ENST00000470944 ZKSCAN1P17029 563 aaPredicted RBP34.26■■■■□ 3.07
SOD1-203ENST00000470944 AKNAD1Q5T1N1 836 aa34.26■■■■□ 3.07
SOD1-203ENST00000470944 MIGA2Q7L4E1 593 aa34.26■■■■□ 3.07
SOD1-203ENST00000470944 NEDD4P46934 1319 aa34.25■■■■□ 3.07
SOD1-203ENST00000470944 TSGA10IPQ3SY00 556 aa34.25■■■■□ 3.07
SOD1-203ENST00000470944 C16orf86Q6ZW13 317 aa34.25■■■■□ 3.07
SOD1-203ENST00000470944 STAG1Q8WVM7 1258 aa34.25■■■■□ 3.07
SOD1-203ENST00000470944 METTL16Q86W50 562 aaKnown RBP34.24■■■■□ 3.07
SOD1-203ENST00000470944 FOXP4Q8IVH2 680 aaPredicted RBP34.24■■■■□ 3.07
SOD1-203ENST00000470944 SSC5DA1L4H1 1573 aa34.24■■■■□ 3.07
SOD1-203ENST00000470944 CDK8P49336 464 aa34.24■■■■□ 3.07
SOD1-203ENST00000470944 CRACR2BQ8N4Y2 399 aaPredicted RBP34.24■■■■□ 3.07
SOD1-203ENST00000470944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34.24■■■■□ 3.07
SOD1-203ENST00000470944 TRAF5O00463 557 aa34.23■■■■□ 3.07
SOD1-203ENST00000470944 FGRP09769 529 aa34.23■■■■□ 3.07
SOD1-203ENST00000470944 FMR1Q06787 632 aaKnown RBP eCLIP34.23■■■■□ 3.07
SOD1-203ENST00000470944 MFSD6Q6ZSS7 791 aa34.23■■■■□ 3.07
SOD1-203ENST00000470944 ZNF784Q8NCA9 323 aaPredicted RBP34.23■■■■□ 3.07
SOD1-203ENST00000470944 SLC3A2P08195 630 aaKnown RBP34.22■■■■□ 3.07
SOD1-203ENST00000470944 CDCA5Q96FF9 252 aa34.22■■■■□ 3.07
SOD1-203ENST00000470944 KIF2CQ99661 725 aa34.22■■■■□ 3.07
SOD1-203ENST00000470944 FZD1Q9UP38 647 aa34.22■■■■□ 3.07
SOD1-203ENST00000470944 SHMT1P34896 483 aa34.21■■■■□ 3.07
SOD1-203ENST00000470944 ANAPC15P60006 121 aa34.21■■■■□ 3.07
SOD1-203ENST00000470944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP34.21■■■■□ 3.07
SOD1-203ENST00000470944 HERC5Q9UII4 1024 aaKnown RBP34.21■■■■□ 3.07
SOD1-203ENST00000470944 MAP3K10Q02779 954 aa34.2■■■■□ 3.07
SOD1-203ENST00000470944 PDE4BQ07343 736 aa34.2■■■■□ 3.07
SOD1-203ENST00000470944 RRP12Q5JTH9 1297 aaKnown RBP34.2■■■■□ 3.07
SOD1-203ENST00000470944 CHADLQ6NUI6 762 aa34.2■■■■□ 3.07
SOD1-203ENST00000470944 RNF41Q9H4P4 317 aaPredicted RBP34.2■■■■□ 3.07
SOD1-203ENST00000470944 TOMM22Q9NS69 142 aa34.2■■■■□ 3.07
SOD1-203ENST00000470944 TRIM34Q9BYJ4 488 aa34.19■■■■□ 3.06
SOD1-203ENST00000470944 MKNK2Q9HBH9 465 aa34.19■■■■□ 3.06
SOD1-203ENST00000470944 TBC1D12O60347 775 aa34.18■■■■□ 3.06
SOD1-203ENST00000470944 JAKMIP1Q96N16 626 aaKnown RBP34.18■■■■□ 3.06
SOD1-203ENST00000470944 SWAP70Q9UH65 585 aa34.18■■■■□ 3.06
SOD1-203ENST00000470944 B4E1Z4 1266 aa34.18■■■■□ 3.06
SOD1-203ENST00000470944 RASA1P20936 1047 aa34.18■■■■□ 3.06
SOD1-203ENST00000470944 RRP1BQ14684 758 aaKnown RBP34.18■■■■□ 3.06
SOD1-203ENST00000470944 SUPT20HL1Q3ZLR7 823 aa34.18■■■■□ 3.06
SOD1-203ENST00000470944 IL17RAQ96F46 866 aa34.18■■■■□ 3.06
SOD1-203ENST00000470944 ORC4O43929 436 aa34.17■■■■□ 3.06
SOD1-203ENST00000470944 KRT32Q14532 448 aa34.17■■■■□ 3.06
SOD1-203ENST00000470944 CPA1P15085 419 aa34.16■■■■□ 3.06
SOD1-203ENST00000470944 TATDN1Q6P1N9 297 aa34.16■■■■□ 3.06
SOD1-203ENST00000470944 NEK1Q96PY6 1258 aa34.16■■■■□ 3.06
SOD1-203ENST00000470944 PCP11498 1178 aaKnown RBP34.16■■■■□ 3.06
SOD1-203ENST00000470944 SHROOM1Q2M3G4 852 aaPredicted RBP34.16■■■■□ 3.06
SOD1-203ENST00000470944 KDM4AO75164 1064 aa34.15■■■■□ 3.06
SOD1-203ENST00000470944 ITGBL1O95965 494 aaPredicted RBP34.15■■■■□ 3.06
SOD1-203ENST00000470944 PRKG1Q13976 671 aa34.15■■■■□ 3.06
SOD1-203ENST00000470944 FAM47AQ5JRC9 791 aa34.15■■■■□ 3.06
SOD1-203ENST00000470944 NCOA7Q8NI08 942 aa34.15■■■■□ 3.06
SOD1-203ENST00000470944 RANBP6O60518 1105 aaKnown RBP34.14■■■■□ 3.06
SOD1-203ENST00000470944 TRDNQ13061 729 aa34.14■■■■□ 3.06
SOD1-203ENST00000470944 MB21D2Q8IYB1 491 aaPredicted RBP34.14■■■■□ 3.06
SOD1-203ENST00000470944 CNNM2Q9H8M5 875 aa34.14■■■■□ 3.06
SOD1-203ENST00000470944 ZNF287Q9HBT7 754 aa34.14■■■■□ 3.06
SOD1-203ENST00000470944 PHF20L1A8MW92 1017 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 CASTP20810 708 aaKnown RBP34.13■■■■□ 3.05
SOD1-203ENST00000470944 RALYLQ86SE5 291 aaKnown RBP34.13■■■■□ 3.05
SOD1-203ENST00000470944 HOOK2Q96ED9 719 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 UPF3BQ9BZI7 483 aaKnown RBP34.13■■■■□ 3.05
SOD1-203ENST00000470944 KRT23Q9C075 422 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 JAG1P78504 1218 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 DCAF15Q66K64 600 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 CYB5R4Q7L1T6 521 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 CHST3Q7LGC8 479 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 ZSWIM5Q9P217 1185 aa34.13■■■■□ 3.05
SOD1-203ENST00000470944 AKR1B1P15121 316 aa34.12■■■■□ 3.05
SOD1-203ENST00000470944 ZNF444Q8N0Y2 327 aaPredicted RBP34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms