RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 GRIN1Q05586 938 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 PPARAQ07869 468 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 MEX3CQ5U5Q3 659 aaKnown RBP10.9□□□□□ -0.66
TOP3A-203ENST00000469739 RGS22Q8NE09 1264 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 OXER1Q8TDS5 423 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 ZMYM6O95789 1325 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 BCORQ6W2J9 1755 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.66
TOP3A-203ENST00000469739 RPS8P62241 208 aaKnown RBP10.9□□□□□ -0.66
TOP3A-203ENST00000469739 SSRP1Q08945 709 aaKnown RBP10.9□□□□□ -0.66
TOP3A-203ENST00000469739 LAMB2P55268 1798 aa10.9□□□□□ -0.66
TOP3A-203ENST00000469739 RTN1Q16799 776 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 CCDC144BQ3MJ40 725 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 BARGINQ6ZT62 677 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF384Q8TF68 577 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 VPS54Q9P1Q0 977 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 CLIP2Q9UDT6 1046 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 MROH7-TTC4A0A0A0MT08 1334 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 FOXN1O15353 648 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF202O95125 648 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 PFKFB1P16118 471 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 DIXDC1Q155Q3 683 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 SMARCC1Q92922 1105 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 GNL3LQ9NVN8 582 aaKnown RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 TNKSO95271 1327 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 NFIXQ14938 502 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 NOM1Q5C9Z4 860 aaKnown RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 ENGASEQ8NFI3 743 aa10.89□□□□□ -0.67
TOP3A-203ENST00000469739 C16orf45Q96MC5 204 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 CGNQ9P2M7 1197 aaKnown RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-203ENST00000469739 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 LMOD1P29536 600 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-203ENST00000469739 RFC4P35249 363 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
TOP3A-203ENST00000469739 PNOCQ13519 176 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 SART3Q15020 963 aaKnown RBP10.88□□□□□ -0.67
TOP3A-203ENST00000469739 NTRK3Q16288 839 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 FAM196AQ6ZSG2 479 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 GRAMD1CQ8IYS0 662 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 FMR1NBQ8N0W7 255 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-203ENST00000469739 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 RTCBQ9Y3I0 505 aaKnown RBP10.88□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF831Q5JPB2 1677 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 SMC2O95347 1197 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 PLEKHA8P1O95397 391 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF75DP51815 510 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 EVCP57679 992 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 MECOMQ03112 1051 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 CABP5Q9NP86 173 aa10.88□□□□□ -0.67
TOP3A-203ENST00000469739 V9GY48 417 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-203ENST00000469739 SLC3A2P08195 630 aaKnown RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 VEGFAP15692 232 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 GRIK5Q16478 980 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 STX1AQ16623 288 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF827Q17R98 1081 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 ZNF512BQ96KM6 892 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 TRMT1Q9NXH9 659 aaKnown RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 HIBADHP31937 336 aaKnown RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 USP49Q70CQ1 688 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 SAP30BPQ9UHR5 308 aaKnown RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 CDKL5O76039 1030 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 ECM2O94769 699 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 USP17L8P0C7I0 530 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 CASP1P29466 404 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 SYKP43405 635 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 TPTE2Q6XPS3 522 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 CACTINQ8WUQ7 758 aaKnown RBP10.87□□□□□ -0.67
TOP3A-203ENST00000469739 STAMQ92783 540 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 DYNLL2Q96FJ2 89 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 KRT23Q9C075 422 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
TOP3A-203ENST00000469739 AKAP17AQ02040 695 aaKnown RBP10.86□□□□□ -0.67
TOP3A-203ENST00000469739 SHC4Q6S5L8 630 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 RASGRP2Q7LDG7 609 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 FANCBQ8NB91 859 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 KCNG4Q8TDN1 519 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.86□□□□□ -0.67
TOP3A-203ENST00000469739 CPVLQ9H3G5 476 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 BSDC1Q9NW68 430 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-203ENST00000469739 MCM9Q9NXL9 1143 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 PCDHB6Q9Y5E3 794 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 COBLO75128 1261 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 GOLGA8FQ08AF8 430 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 GOLGA8DPQ0D2H9 430 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 IQCB1Q15051 598 aa10.86□□□□□ -0.67
TOP3A-203ENST00000469739 AXDND1Q5T1B0 1012 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-203ENST00000469739 IFIT1BQ5T764 474 aaKnown RBP10.86□□□□□ -0.67
TOP3A-203ENST00000469739 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms