RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 CCDC158Q5M9N0 1113 aa15.59■□□□□ 0.09
GAPVD1-214ENST00000469528 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
GAPVD1-214ENST00000469528 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
GAPVD1-214ENST00000469528 SHISA4Q96DD7 197 aa15.59■□□□□ 0.09
GAPVD1-214ENST00000469528 BRCA2P51587 3418 aa15.58■□□□□ 0.09
GAPVD1-214ENST00000469528 EVI5O60447 810 aa15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 ARID4AP29374 1257 aaPredicted RBP15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 CAP2P40123 477 aa15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 UBE2Q1Q7Z7E8 422 aa15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 TEX11Q8IYF3 940 aa15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 TRIM34Q9BYJ4 488 aa15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 UNC93B1Q9H1C4 597 aa15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 TAOK2Q9UL54 1235 aa15.58■□□□□ 0.08
GAPVD1-214ENST00000469528 CCER2I3L3R5 266 aa15.57■□□□□ 0.08
GAPVD1-214ENST00000469528 INHAP05111 366 aa15.57■□□□□ 0.08
GAPVD1-214ENST00000469528 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
GAPVD1-214ENST00000469528 TBC1D9Q6ZT07 1266 aa15.57■□□□□ 0.08
GAPVD1-214ENST00000469528 FOXP4Q8IVH2 680 aaPredicted RBP15.57■□□□□ 0.08
GAPVD1-214ENST00000469528 GINM1Q9NU53 330 aa15.57■□□□□ 0.08
GAPVD1-214ENST00000469528 RFX7Q2KHR2 1363 aa15.57■□□□□ 0.08
GAPVD1-214ENST00000469528 C19orf81C9J6K1 198 aa15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 ASNSP08243 561 aa15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 ELNP15502 786 aa15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 SH3D19Q5HYK7 790 aa15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 NAA16Q6N069 864 aaPredicted RBP15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 FRAT1Q92837 279 aaPredicted RBP15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 DEFB118Q96PH6 123 aa15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 GPR108Q9NPR9 543 aa15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 TMOD4Q9NZQ9 345 aa15.56■□□□□ 0.08
GAPVD1-214ENST00000469528 COL2A1P02458 1487 aaPredicted RBP15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 A0A1W2PPC1 479 aa15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 HMGCS2P54868 508 aa15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 TTC39AQ5SRH9 613 aa15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 TREML2Q5T2D2 321 aa15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 NECAB2Q7Z6G3 386 aa15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 ANKLE1Q8NAG6 615 aa15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 WDR18Q9BV38 432 aa15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 PAK6Q9NQU5 681 aaPredicted RBP15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
GAPVD1-214ENST00000469528 ZSWIM8A7E2V4 1837 aa15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 DOCK2Q92608 1830 aa15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 ZBTB7BO15156 539 aaPredicted RBP15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 PPP4CP60510 307 aa15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 IRX3P78415 501 aaPredicted RBP15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 OS9Q13438 667 aaPredicted RBP15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 CERS3Q8IU89 383 aa15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 CCAR1Q8IX12 1150 aaKnown RBP15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 TRMT44Q8IYL2 757 aaKnown RBP15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 CRACR2BQ8N4Y2 399 aaPredicted RBP15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 HMX1Q9NP08 348 aaPredicted RBP15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 CEP290O15078 2479 aa15.54■□□□□ 0.08
GAPVD1-214ENST00000469528 MGAMO43451 1857 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 RPTORQ8N122 1335 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 HMGCRP04035 888 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 TRIM27P14373 513 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 HOXA7P31268 230 aaPredicted RBP15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 MCAMP43121 646 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 BACE1P56817 501 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 ZNF384Q8TF68 577 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 GTF3C2Q8WUA4 911 aaPredicted RBP15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 CRISPLD2Q9H0B8 497 aa15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 ASCC2Q9H1I8 757 aaPredicted RBP15.53■□□□□ 0.08
GAPVD1-214ENST00000469528 FAM196BA6NMK8 535 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 USP17L10C9JJH3 530 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 HLA-DOAP06340 250 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 SLURP2P0DP57 97 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 ATP8B2P98198 1209 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 ZKSCAN2Q63HK3 967 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 PI16Q6UXB8 463 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 CCDC84Q86UT8 332 aaPredicted RBP15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 GPRC5AQ8NFJ5 357 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 SH3RF3Q8TEJ3 882 aaPredicted RBP15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 TGFBRAP1Q8WUH2 860 aa15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 ZNF512BQ96KM6 892 aaPredicted RBP15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.52■□□□□ 0.085e-11■■■■□ 24
GAPVD1-214ENST00000469528 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
GAPVD1-214ENST00000469528 DOCK1Q14185 1865 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 PNMA6EA0A0J9YXQ4 647 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 TNNI3KQ59H18 835 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 CLUAP1Q96AJ1 413 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 PAWRQ96IZ0 340 aaKnown RBP15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 NUDT12Q9BQG2 462 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 MORF4L1Q9UBU8 362 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 GJD2Q9UKL4 321 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 FPGT-TNNI3KV9GXZ4 949 aa15.51■□□□□ 0.07
GAPVD1-214ENST00000469528 SURF6O75683 361 aaKnown RBP15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 BCAR3O75815 825 aa15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 XRCC5P13010 732 aaKnown RBP15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 MAPK4P31152 587 aa15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 PDE3AQ14432 1141 aa15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 METTL16Q86W50 562 aaKnown RBP15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 SOCS4Q8WXH5 440 aa15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 NBPF3Q9H094 633 aa15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 SNRKQ9NRH2 765 aa15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.5■□□□□ 0.07
GAPVD1-214ENST00000469528 MTMR2Q13614 643 aa15.49■□□□□ 0.07
GAPVD1-214ENST00000469528 POLA2Q14181 598 aa15.49■□□□□ 0.07
GAPVD1-214ENST00000469528 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms