RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 AGTPBP1Q9UPW5 1226 aa21.23■□□□□ 0.99
TRIM56-203ENST00000467847 MAST2Q6P0Q8 1798 aa21.23■□□□□ 0.99
TRIM56-203ENST00000467847 OS9Q13438 667 aaPredicted RBP21.22■□□□□ 0.99
TRIM56-203ENST00000467847 NOL10Q9BSC4 688 aaKnown RBP21.22■□□□□ 0.99
TRIM56-203ENST00000467847 RNF208Q9H0X6 261 aa21.22■□□□□ 0.99
TRIM56-203ENST00000467847 LOC285556D6RIA3 1793 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 GJB1P08034 283 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 GJA8P48165 433 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 TTC39AQ5SRH9 613 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 TREML2Q5T2D2 321 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 SLC17A8Q8NDX2 589 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 SH3RF3Q8TEJ3 882 aaPredicted RBP21.21■□□□□ 0.99
TRIM56-203ENST00000467847 SNRKQ9NRH2 765 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 TRIOBPQ9H2D6 2365 aa21.21■□□□□ 0.99
TRIM56-203ENST00000467847 DLL1O00548 723 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 TNPO2O14787 897 aaKnown RBP21.2■□□□□ 0.98
TRIM56-203ENST00000467847 SPP2Q13103 211 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 POLA2Q14181 598 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 TNNI3KQ59H18 835 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 PROCA1Q8NCQ7 364 aaPredicted RBP21.2■□□□□ 0.98
TRIM56-203ENST00000467847 GPR108Q9NPR9 543 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 PNMA3Q9UL41 463 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 CDK5RAP2Q96SN8 1893 aa21.2■□□□□ 0.98
TRIM56-203ENST00000467847 DOCK3Q8IZD9 2030 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 ADCY3O60266 1144 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 CAP2P40123 477 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 FLT3LGP49771 235 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 CCDC158Q5M9N0 1113 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 NAA16Q6N069 864 aaPredicted RBP21.19■□□□□ 0.98
TRIM56-203ENST00000467847 ANKRD13CQ8N6S4 541 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 ZNF280CQ8ND82 737 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 DBNDD2Q9BQY9 259 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 TBC1D2Q9BYX2 928 aa21.19■□□□□ 0.98
TRIM56-203ENST00000467847 AATFQ9NY61 560 aaKnown RBP eCLIP21.19■□□□□ 0.98
TRIM56-203ENST00000467847 RBM27Q9P2N5 1060 aaKnown RBP21.19■□□□□ 0.98
TRIM56-203ENST00000467847 HERC5Q9UII4 1024 aaKnown RBP21.19■□□□□ 0.98
TRIM56-203ENST00000467847 MYO5AQ9Y4I1 1855 aaKnown RBP21.19■□□□□ 0.98
TRIM56-203ENST00000467847 BAG3O95817 575 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 ELNP15502 786 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 ATP8B2P98198 1209 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 SSH3Q8TE77 659 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 UNC93B1Q9H1C4 597 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 C1orf115Q9H7X2 142 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 SIPA1L1O43166 1804 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 FOCADQ5VW36 1801 aa21.18■□□□□ 0.98
TRIM56-203ENST00000467847 USP17L5A8MUK1 530 aa21.17■□□□□ 0.98
TRIM56-203ENST00000467847 SURF6O75683 361 aaKnown RBP21.17■□□□□ 0.98
TRIM56-203ENST00000467847 PLCG2P16885 1265 aa21.17■□□□□ 0.98
TRIM56-203ENST00000467847 HMGCS2P54868 508 aa21.17■□□□□ 0.98
TRIM56-203ENST00000467847 RRP1BQ14684 758 aaKnown RBP21.17■□□□□ 0.98
TRIM56-203ENST00000467847 FTSJ3Q8IY81 847 aaKnown RBP21.17■□□□□ 0.98
TRIM56-203ENST00000467847 U2AF1L4Q8WU68 220 aaKnown RBP21.17■□□□□ 0.98
TRIM56-203ENST00000467847 COA7Q96BR5 231 aa21.17■□□□□ 0.98
TRIM56-203ENST00000467847 DHX36Q9H2U1 1008 aaKnown RBP21.17■□□□□ 0.98
TRIM56-203ENST00000467847 PI4KBQ9UBF8 816 aa21.17■□□□□ 0.98
TRIM56-203ENST00000467847 INHAP05111 366 aa21.16■□□□□ 0.98
TRIM56-203ENST00000467847 PABPC4Q13310 644 aaKnown RBP eCLIP21.16■□□□□ 0.98
TRIM56-203ENST00000467847 IRF5Q13568 498 aa21.16■□□□□ 0.98
TRIM56-203ENST00000467847 FAM110CQ1W6H9 321 aa21.16■□□□□ 0.98
TRIM56-203ENST00000467847 PXYLP1Q8TE99 480 aa21.16■□□□□ 0.98
TRIM56-203ENST00000467847 HTATIP2Q9BUP3 242 aa21.16■□□□□ 0.98
TRIM56-203ENST00000467847 TAOK2Q9UL54 1235 aa21.16■□□□□ 0.98
TRIM56-203ENST00000467847 CYP2E1P05181 493 aaPredicted RBP21.15■□□□□ 0.98
TRIM56-203ENST00000467847 GCLCP48506 637 aaPredicted RBP21.15■□□□□ 0.98
TRIM56-203ENST00000467847 UBE2Q1Q7Z7E8 422 aa21.15■□□□□ 0.98
TRIM56-203ENST00000467847 ADGRA1Q86SQ6 560 aa21.15■□□□□ 0.98
TRIM56-203ENST00000467847 MAPKAPK5Q8IW41 473 aa21.15■□□□□ 0.98
TRIM56-203ENST00000467847 ITPRIPQ8IWB1 547 aa21.15■□□□□ 0.98
TRIM56-203ENST00000467847 TGFBRAP1Q8WUH2 860 aa21.15■□□□□ 0.98
TRIM56-203ENST00000467847 AS3MTQ9HBK9 375 aa21.15■□□□□ 0.98
TRIM56-203ENST00000467847 NR2E3Q9Y5X4 410 aa21.15■□□□□ 0.98
TRIM56-203ENST00000467847 FLT1P17948 1338 aa21.14■□□□□ 0.97
TRIM56-203ENST00000467847 PPP4CP60510 307 aa21.14■□□□□ 0.97
TRIM56-203ENST00000467847 ZNF512BQ96KM6 892 aaPredicted RBP21.14■□□□□ 0.97
TRIM56-203ENST00000467847 TRIM34Q9BYJ4 488 aa21.14■□□□□ 0.97
TRIM56-203ENST00000467847 FARP2O94887 1054 aaPredicted RBP21.13■□□□□ 0.97
TRIM56-203ENST00000467847 SGPL1O95470 568 aa21.13■□□□□ 0.97
TRIM56-203ENST00000467847 ZAP70P43403 619 aa21.13■□□□□ 0.97
TRIM56-203ENST00000467847 HNRNPUQ00839 825 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRIM56-203ENST00000467847 SH3D19Q5HYK7 790 aa21.13■□□□□ 0.97
TRIM56-203ENST00000467847 CRACR2BQ8N4Y2 399 aaPredicted RBP21.13■□□□□ 0.97
TRIM56-203ENST00000467847 ASCC2Q9H1I8 757 aaPredicted RBP21.13■□□□□ 0.97
TRIM56-203ENST00000467847 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
TRIM56-203ENST00000467847 SZT2Q5T011 3432 aa21.13■□□□□ 0.97
TRIM56-203ENST00000467847 ASNSP08243 561 aa21.12■□□□□ 0.97
TRIM56-203ENST00000467847 MTMR2Q13614 643 aa21.12■□□□□ 0.97
TRIM56-203ENST00000467847 WDR18Q9BV38 432 aa21.12■□□□□ 0.97
TRIM56-203ENST00000467847 PIH1D3Q9NQM4 214 aaKnown RBP21.12■□□□□ 0.97
TRIM56-203ENST00000467847 TLR7Q9NYK1 1049 aaKnown RBP21.12■□□□□ 0.97
TRIM56-203ENST00000467847 PALD1Q9ULE6 856 aa21.12■□□□□ 0.97
TRIM56-203ENST00000467847 NOP58Q9Y2X3 529 aaKnown RBP21.12■□□□□ 0.97
TRIM56-203ENST00000467847 RANBP2P49792 3224 aaKnown RBP21.11■□□□□ 0.97
TRIM56-203ENST00000467847 IGSF3O75054 1194 aa21.11■□□□□ 0.97
TRIM56-203ENST00000467847 TFRCP02786 760 aaKnown RBP21.11■□□□□ 0.97
TRIM56-203ENST00000467847 RLBP1P12271 317 aa21.11■□□□□ 0.97
TRIM56-203ENST00000467847 FOXP4Q8IVH2 680 aaPredicted RBP21.11■□□□□ 0.97
TRIM56-203ENST00000467847 DEFB118Q96PH6 123 aa21.11■□□□□ 0.97
TRIM56-203ENST00000467847 CCDC8Q9H0W5 538 aaPredicted RBP21.11■□□□□ 0.97
TRIM56-203ENST00000467847 DNAJC18Q9H819 358 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms