RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 SOX1O00570 391 aaPredicted RBP23.81■■□□□ 1.4
FAM53A-204ENST00000467215 TFRCP02786 760 aaKnown RBP23.81■■□□□ 1.4
FAM53A-204ENST00000467215 TFCP2Q12800 502 aa23.81■■□□□ 1.4
FAM53A-204ENST00000467215 SPTY2D1Q68D10 685 aaPredicted RBP23.81■■□□□ 1.4
FAM53A-204ENST00000467215 CRISPLD2Q9H0B8 497 aa23.81■■□□□ 1.4
FAM53A-204ENST00000467215 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.81■■□□□ 1.4
FAM53A-204ENST00000467215 MVPQ14764 893 aaKnown RBP23.8■■□□□ 1.4
FAM53A-204ENST00000467215 ERICH6Q7L0X2 663 aa23.8■■□□□ 1.4
FAM53A-204ENST00000467215 PROCA1Q8NCQ7 364 aaPredicted RBP23.8■■□□□ 1.4
FAM53A-204ENST00000467215 PAWRQ96IZ0 340 aaKnown RBP23.8■■□□□ 1.4
FAM53A-204ENST00000467215 API5Q9BZZ5 524 aaKnown RBP23.8■■□□□ 1.4
FAM53A-204ENST00000467215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.8■■□□□ 1.4
FAM53A-204ENST00000467215 TBC1D12O60347 775 aa23.79■■□□□ 1.4
FAM53A-204ENST00000467215 HMGCS2P54868 508 aa23.79■■□□□ 1.4
FAM53A-204ENST00000467215 OSBPL5Q9H0X9 879 aaPredicted RBP23.79■■□□□ 1.4
FAM53A-204ENST00000467215 A0A1W2PPC1 479 aa23.78■■□□□ 1.4
FAM53A-204ENST00000467215 SPP2Q13103 211 aa23.78■■□□□ 1.4
FAM53A-204ENST00000467215 RRP1BQ14684 758 aaKnown RBP23.78■■□□□ 1.4
FAM53A-204ENST00000467215 LRCH3Q96II8 777 aa23.78■■□□□ 1.4
FAM53A-204ENST00000467215 HMG20BQ9P0W2 317 aa23.78■■□□□ 1.4
FAM53A-204ENST00000467215 SRGAP3O43295 1099 aa23.77■■□□□ 1.4
FAM53A-204ENST00000467215 HMGCRP04035 888 aa23.77■■□□□ 1.4
FAM53A-204ENST00000467215 TBC1D9Q6ZT07 1266 aa23.77■■□□□ 1.4
FAM53A-204ENST00000467215 NSUN4Q96CB9 384 aaKnown RBP23.77■■□□□ 1.4
FAM53A-204ENST00000467215 STAP2Q9UGK3 403 aa23.77■■□□□ 1.4
FAM53A-204ENST00000467215 NPM3O75607 178 aaKnown RBP23.76■■□□□ 1.39
FAM53A-204ENST00000467215 TRIM32Q13049 653 aa23.76■■□□□ 1.39
FAM53A-204ENST00000467215 ZNF280CQ8ND82 737 aa23.76■■□□□ 1.39
FAM53A-204ENST00000467215 HDAC5Q9UQL6 1122 aa23.76■■□□□ 1.39
FAM53A-204ENST00000467215 AKAP2Q9Y2D5 859 aa23.76■■□□□ 1.39
FAM53A-204ENST00000467215 MYH1P12882 1939 aa23.75■■□□□ 1.39
FAM53A-204ENST00000467215 C7orf61Q8IZ16 206 aa23.75■■□□□ 1.39
FAM53A-204ENST00000467215 TRMT2AQ8IZ69 625 aaKnown RBP23.75■■□□□ 1.39
FAM53A-204ENST00000467215 SPATA5Q8NB90 893 aa23.75■■□□□ 1.39
FAM53A-204ENST00000467215 NEUROD6Q96NK8 337 aa23.75■■□□□ 1.39
FAM53A-204ENST00000467215 ASCC2Q9H1I8 757 aaPredicted RBP23.75■■□□□ 1.39
FAM53A-204ENST00000467215 CAP2P40123 477 aa23.74■■□□□ 1.39
FAM53A-204ENST00000467215 GCLCP48506 637 aaPredicted RBP23.74■■□□□ 1.39
FAM53A-204ENST00000467215 MTX1Q13505 466 aa23.74■■□□□ 1.39
FAM53A-204ENST00000467215 NECAB2Q7Z6G3 386 aa23.74■■□□□ 1.39
FAM53A-204ENST00000467215 TEX11Q8IYF3 940 aa23.74■■□□□ 1.39
FAM53A-204ENST00000467215 RAI14Q9P0K7 980 aa23.74■■□□□ 1.39
FAM53A-204ENST00000467215 COL6A3P12111 3177 aa23.74■■□□□ 1.39
FAM53A-204ENST00000467215 CT47B1P0C2W7 299 aaPredicted RBP23.73■■□□□ 1.39
FAM53A-204ENST00000467215 CAPN2P17655 700 aa23.73■■□□□ 1.39
FAM53A-204ENST00000467215 ARID4AP29374 1257 aaPredicted RBP23.73■■□□□ 1.39
FAM53A-204ENST00000467215 MCAMP43121 646 aa23.73■■□□□ 1.39
FAM53A-204ENST00000467215 GSTO1P78417 241 aa23.73■■□□□ 1.39
FAM53A-204ENST00000467215 ZMYND8Q9ULU4 1186 aaPredicted RBP23.73■■□□□ 1.39
FAM53A-204ENST00000467215 USP17L5A8MUK1 530 aa23.72■■□□□ 1.39
FAM53A-204ENST00000467215 PABPC4Q13310 644 aaKnown RBP eCLIP23.72■■□□□ 1.39
FAM53A-204ENST00000467215 MTMR2Q13614 643 aa23.72■■□□□ 1.39
FAM53A-204ENST00000467215 SH3D19Q5HYK7 790 aa23.72■■□□□ 1.39
FAM53A-204ENST00000467215 SH3RF3Q8TEJ3 882 aaPredicted RBP23.72■■□□□ 1.39
FAM53A-204ENST00000467215 TRIB2Q92519 343 aa23.72■■□□□ 1.39
FAM53A-204ENST00000467215 TBC1D2Q9BYX2 928 aa23.72■■□□□ 1.39
FAM53A-204ENST00000467215 GJD2Q9UKL4 321 aa23.72■■□□□ 1.39
FAM53A-204ENST00000467215 PEX10O60683 326 aa23.71■■□□□ 1.39
FAM53A-204ENST00000467215 LDHCP07864 332 aa23.71■■□□□ 1.39
FAM53A-204ENST00000467215 GNAI3P08754 354 aa23.71■■□□□ 1.39
FAM53A-204ENST00000467215 GORABQ5T7V8 394 aa23.71■■□□□ 1.39
FAM53A-204ENST00000467215 ANKLE1Q8NAG6 615 aa23.71■■□□□ 1.39
FAM53A-204ENST00000467215 RPTORQ8N122 1335 aa23.7■■□□□ 1.38
FAM53A-204ENST00000467215 MAP4K4O95819 1239 aaPredicted RBP23.7■■□□□ 1.38
FAM53A-204ENST00000467215 MNX1P50219 401 aaPredicted RBP23.7■■□□□ 1.38
FAM53A-204ENST00000467215 SHROOM1Q2M3G4 852 aaPredicted RBP23.7■■□□□ 1.38
FAM53A-204ENST00000467215 GDF15Q99988 308 aa23.7■■□□□ 1.38
FAM53A-204ENST00000467215 DNAJC18Q9H819 358 aa23.7■■□□□ 1.38
FAM53A-204ENST00000467215 AS3MTQ9HBK9 375 aa23.7■■□□□ 1.38
FAM53A-204ENST00000467215 HMX1Q9NP08 348 aaPredicted RBP23.7■■□□□ 1.38
FAM53A-204ENST00000467215 MORF4L1Q9UBU8 362 aa23.7■■□□□ 1.38
FAM53A-204ENST00000467215 HERC5Q9UII4 1024 aaKnown RBP23.7■■□□□ 1.38
FAM53A-204ENST00000467215 RARSP54136 660 aaKnown RBP23.69■■□□□ 1.38
FAM53A-204ENST00000467215 IRX3P78415 501 aaPredicted RBP23.69■■□□□ 1.38
FAM53A-204ENST00000467215 TNNQ9UQP3 1299 aa23.69■■□□□ 1.38
FAM53A-204ENST00000467215 PNMA6EA0A0J9YXQ4 647 aa23.68■■□□□ 1.38
FAM53A-204ENST00000467215 SYN1P17600 705 aa23.68■■□□□ 1.38
FAM53A-204ENST00000467215 JAG1P78504 1218 aa23.68■■□□□ 1.38
FAM53A-204ENST00000467215 SLC17A8Q8NDX2 589 aa23.68■■□□□ 1.38
FAM53A-204ENST00000467215 AATFQ9NY61 560 aaKnown RBP eCLIP23.68■■□□□ 1.38
FAM53A-204ENST00000467215 FLT1P17948 1338 aa23.67■■□□□ 1.38
FAM53A-204ENST00000467215 CYP2B6P20813 491 aa23.67■■□□□ 1.38
FAM53A-204ENST00000467215 NBPF3Q9H094 633 aa23.67■■□□□ 1.38
FAM53A-204ENST00000467215 TXNRD2Q9NNW7 524 aa23.67■■□□□ 1.38
FAM53A-204ENST00000467215 LRP2BPQ9P2M1 347 aa23.67■■□□□ 1.38
FAM53A-204ENST00000467215 NAV1Q8NEY1 1877 aa23.66■■□□□ 1.38
FAM53A-204ENST00000467215 PFASO15067 1338 aa23.66■■□□□ 1.38
FAM53A-204ENST00000467215 GDF11O95390 407 aa23.66■■□□□ 1.38
FAM53A-204ENST00000467215 PRKAR2AP13861 404 aaKnown RBP23.66■■□□□ 1.38
FAM53A-204ENST00000467215 MAP3K21Q5TCX8 1036 aa23.66■■□□□ 1.38
FAM53A-204ENST00000467215 MAPKAPK5Q8IW41 473 aa23.66■■□□□ 1.38
FAM53A-204ENST00000467215 NOL10Q9BSC4 688 aaKnown RBP23.66■■□□□ 1.38
FAM53A-204ENST00000467215 WDR18Q9BV38 432 aa23.66■■□□□ 1.38
FAM53A-204ENST00000467215 C11orf49Q9H6J7 331 aa23.66■■□□□ 1.38
FAM53A-204ENST00000467215 ASNSP08243 561 aa23.65■■□□□ 1.38
FAM53A-204ENST00000467215 BACE1P56817 501 aa23.65■■□□□ 1.38
FAM53A-204ENST00000467215 HERVK_113P62684 666 aa23.65■■□□□ 1.38
FAM53A-204ENST00000467215 ADGRA1Q86SQ6 560 aa23.65■■□□□ 1.38
FAM53A-204ENST00000467215 SNRKQ9NRH2 765 aa23.65■■□□□ 1.38
FAM53A-204ENST00000467215 TMOD4Q9NZQ9 345 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms