RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 PRKRIP1Q9H875 184 aaPredicted RBP4.46□□□□□ -1.7
SORT1-202ENST00000466471 RAB6BQ9NRW1 208 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 CCDC87Q9NVE4 849 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 NSFL1CQ9UNZ2 370 aaKnown RBP4.46□□□□□ -1.7
SORT1-202ENST00000466471 PASKQ96RG2 1323 aa4.46□□□□□ -1.7
SORT1-202ENST00000466471 KAT6BQ8WYB5 2073 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 USP31Q70CQ4 1352 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 SPATA31C2B4DYI2 1134 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 TCERG1O14776 1098 aaKnown RBP4.45□□□□□ -1.7
SORT1-202ENST00000466471 OIP5O43482 229 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 CLSTN1O94985 981 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 F11P03951 625 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 PROCP04070 461 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 GTF2F1P35269 517 aaKnown RBP eCLIP4.45□□□□□ -1.7
SORT1-202ENST00000466471 SMTNP53814 917 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 SNRPNP63162 240 aaKnown RBP4.45□□□□□ -1.7
SORT1-202ENST00000466471 RTN1Q16799 776 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 C11orf91Q3C1V1 193 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 CCDC144BQ3MJ40 725 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 XP32Q5T750 250 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 EGFLAMQ63HQ2 1017 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 SDE2Q6IQ49 451 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 MKL1Q969V6 931 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 DNAJC2Q99543 621 aaKnown RBP4.45□□□□□ -1.7
SORT1-202ENST00000466471 OXCT2Q9BYC2 517 aaPredicted RBP4.45□□□□□ -1.7
SORT1-202ENST00000466471 SAP130Q9H0E3 1048 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 ACBD3Q9H3P7 528 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 INPP5FQ9Y2H2 1132 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 HTTP42858 3142 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 UBR3Q6ZT12 1888 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 USP6P35125 1406 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 PRR36Q9H6K5 1346 aa4.45□□□□□ -1.7
SORT1-202ENST00000466471 PLEKHH1Q9ULM0 1364 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 RASSF10A6NK89 507 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 SHISA8B8ZZ34 492 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 THBS1P07996 1170 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
SORT1-202ENST00000466471 EIF4BP23588 611 aaKnown RBP4.44□□□□□ -1.7
SORT1-202ENST00000466471 HSD3B2P26439 372 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 CENPCQ03188 943 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 WDR44Q5JSH3 913 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 SLC9A9Q8IVB4 645 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 RASGRP4Q8TDF6 673 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 FAM161BQ96MY7 647 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 NIF3L1Q9GZT8 377 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 OSBPL2Q9H1P3 480 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 ETNK1Q9HBU6 452 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 RRP7BPQ9NSQ0 103 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 TFCP2L1Q9NZI6 479 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 ADAMTSL1Q8N6G6 1762 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 DAPK1P53355 1430 aa4.44□□□□□ -1.7
SORT1-202ENST00000466471 CCDC88AQ3V6T2 1871 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 KTN1Q86UP2 1357 aaKnown RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 DICER1Q9UPY3 1922 aaKnown RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 KRBA1A5PL33 1030 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 STK10O94804 968 aaKnown RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 PDGFAP04085 211 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 FGRP09769 529 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 DNAJA1P31689 397 aaKnown RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 HNRNPUQ00839 825 aaKnown RBP eCLIP4.43□□□□□ -1.7
SORT1-202ENST00000466471 TEAD4Q15561 434 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 C1orf53Q5VUE5 145 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 MSL1Q68DK7 614 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 ZNF746Q6NUN9 644 aaPredicted RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 C1orf229Q6ZS94 237 aaPredicted RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 USP48Q86UV5 1035 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 COL23A1Q86Y22 540 aaPredicted RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 ZCRB1Q8TBF4 217 aaKnown RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 DHX38Q92620 1227 aaKnown RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 CNKSR1Q969H4 720 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 XAGE2Q96GT9 111 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 CCDC136Q96JN2 1154 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 CFHR5Q9BXR6 569 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 METTL14Q9HCE5 456 aaKnown RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 LRFN2Q9ULH4 789 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 NUDCQ9Y266 331 aa4.43□□□□□ -1.7
SORT1-202ENST00000466471 GPC6Q9Y625 555 aaPredicted RBP4.43□□□□□ -1.7
SORT1-202ENST00000466471 RBBP6Q7Z6E9 1792 aaKnown RBP4.42□□□□□ -1.7
SORT1-202ENST00000466471 GPRASP1Q5JY77 1395 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 TONSLQ96HA7 1378 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 ABCC11Q96J66 1382 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 CCDC7Q96M83 1385 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 ANKRD30AQ9BXX3 1397 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 CPNE3O75131 537 aaKnown RBP4.42□□□□□ -1.7
SORT1-202ENST00000466471 LGR5O75473 907 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 IL2RAP01589 272 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 CTSHP09668 335 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 ANP32AP39687 249 aaKnown RBP4.42□□□□□ -1.7
SORT1-202ENST00000466471 ZAP70P43403 619 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 MAP2K3P46734 347 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 CENPFP49454 3210 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 EVA1CP58658 441 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 DGKZQ13574 1117 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 XKR5Q6UX68 686 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 TTC16Q8NEE8 873 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 DOT1LQ8TEK3 1739 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 SEC16BQ96JE7 1060 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 SNX27Q96L92 541 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 ESYT1Q9BSJ8 1104 aa4.42□□□□□ -1.7
SORT1-202ENST00000466471 RUBCNLQ9H714 662 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms