RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 GPTP24298 496 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 HMGB2P26583 209 aaKnown RBP7.9□□□□□ -1.14
CDHR3-204ENST00000466351 SYKP43405 635 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 NDUFA8P51970 172 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 HAND2P61296 217 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 MYL5Q02045 173 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 WTAPQ15007 396 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 RTN1Q16799 776 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 CCDC178Q5BJE1 867 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 RC3H1Q5TC82 1133 aaKnown RBP7.9□□□□□ -1.14
CDHR3-204ENST00000466351 CHADLQ6NUI6 762 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 PI16Q6UXB8 463 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 NYAP1Q6ZVC0 841 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 CYB5R4Q7L1T6 521 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 DRC7Q8IY82 874 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 PDCL2Q8N4E4 241 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 KRI1Q8N9T8 703 aaKnown RBP7.9□□□□□ -1.14
CDHR3-204ENST00000466351 WWC3Q9ULE0 1092 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 DENND2AQ9ULE3 1009 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 NAP1L2Q9ULW6 460 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-204ENST00000466351 PYCARDQ9ULZ3 195 aa7.9□□□□□ -1.14
CDHR3-204ENST00000466351 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-204ENST00000466351 LRRC37AA6NMS7 1700 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 ROBO3Q96MS0 1386 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 MROH7-TTC4A0A0A0MT08 1334 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 A0A0G2JLW4 131 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 KDM4FA0A1W2PPD8 638 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 B4E1Z4 1266 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 IFIT3O14879 490 aaKnown RBP7.89□□□□□ -1.15
CDHR3-204ENST00000466351 APPP05067 770 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 PTPREP23469 700 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 TRAPPC10P48553 1259 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 TDO2P48775 406 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 GNL2Q13823 731 aaKnown RBP7.89□□□□□ -1.15
CDHR3-204ENST00000466351 SLFNL1Q499Z3 407 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 CAVIN4Q5BKX8 364 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 SUSD4Q5VX71 490 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 NFXL1Q6ZNB6 911 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 PROM2Q8N271 834 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 AOPEPQ8N6M6 819 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 MAGEB6Q8N7X4 407 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 MLKLQ8NB16 471 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 SPATA20Q8TB22 786 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 CACTINQ8WUQ7 758 aaKnown RBP7.89□□□□□ -1.15
CDHR3-204ENST00000466351 ANKRD7Q92527 254 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 FERMT2Q96AC1 680 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 UBAC1Q9BSL1 405 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDHR3-204ENST00000466351 FAM217BQ9NTX9 383 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-204ENST00000466351 CLIC4Q9Y696 253 aa7.89□□□□□ -1.15
CDHR3-204ENST00000466351 GOLGA6L9A6NEM1 432 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 KIF28PB7ZC32 967 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 RANBP6O60518 1105 aaKnown RBP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 SFPQP23246 707 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 ERCC5P28715 1186 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 CDC27P30260 824 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 CCZ1BP86790 482 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 CCZ1P86791 482 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 CHRNDQ07001 517 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 PPARAQ07869 468 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 SEC23AQ15436 765 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 DPCR1Q3MIW9 517 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 SBK1Q52WX2 424 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 KRBA2Q6ZNG9 492 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 MICU3Q86XE3 530 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 IQCA1Q86XH1 822 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 ANKRD18AQ8IVF6 992 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 ZNF654Q8IZM8 581 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 CRACR2BQ8N4Y2 399 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 SPC24Q8NBT2 197 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 FEZ1Q99689 392 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 GTPBP4Q9BZE4 634 aaKnown RBP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 FTOQ9C0B1 505 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 ANKRD2Q9GZV1 360 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 BRMS1Q9HCU9 246 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 ATP8A2Q9NTI2 1148 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 AATFQ9NY61 560 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 ZSWIM5Q9P217 1185 aa7.88□□□□□ -1.15
CDHR3-204ENST00000466351 CCDC9Q9Y3X0 531 aaKnown RBP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 SRPRBQ9Y5M8 271 aaKnown RBP7.88□□□□□ -1.15
CDHR3-204ENST00000466351 COL1A1P02452 1464 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 MAGEB6P1A0A0J9YX57 407 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 A0A1B0GVL5 298 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 PRPF3O43395 683 aaKnown RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 POLR3DP05423 398 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 SKILP12757 684 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 HOXA7P31268 230 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 CEBPZQ03701 1054 aaKnown RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 NCAPHQ15003 741 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 SPTY2D1Q68D10 685 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 SHC4Q6S5L8 630 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 OLFM4Q6UX06 510 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 C15orf52Q6ZUT6 534 aaKnown RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 CHST3Q7LGC8 479 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 FANCBQ8NB91 859 aa7.87□□□□□ -1.15
CDHR3-204ENST00000466351 RIOK1Q9BRS2 568 aaKnown RBP7.87□□□□□ -1.15
CDHR3-204ENST00000466351 CCDC94Q9BW85 323 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms