RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 KSR1Q8IVT5 923 aa7.31□□□□□ -1.24
VPS8-217ENST00000465213 SPACA3Q8IXA5 215 aa7.31□□□□□ -1.24
VPS8-217ENST00000465213 GPBAR1Q8TDU6 330 aa7.31□□□□□ -1.24
VPS8-217ENST00000465213 ASB11Q8WXH4 323 aa7.31□□□□□ -1.24
VPS8-217ENST00000465213 SSU72Q9NP77 194 aaKnown RBP7.31□□□□□ -1.24
VPS8-217ENST00000465213 ITIH2P19823 946 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 RING1Q06587 406 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 NXPE4Q6UWF7 544 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 ZSWIM9Q86XI8 627 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 C3orf58Q8NDZ4 430 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 FBF1Q8TES7 1133 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 FAM84AQ96KN4 292 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 PRDM10Q9NQV6 1147 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 FAM53CQ9NYF3 392 aa7.3□□□□□ -1.24
VPS8-217ENST00000465213 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
VPS8-217ENST00000465213 NECAB3Q96P71 396 aaPredicted RBP7.29□□□□□ -1.24
VPS8-217ENST00000465213 SLC38A3Q99624 504 aa7.29□□□□□ -1.24
VPS8-217ENST00000465213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS8-217ENST00000465213 ANKRD33BA6NCL7 494 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 CLCN7P51798 805 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 NKPD1Q17RQ9 610 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 SCARA3Q6AZY7 606 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 ALG1LQ6GMV1 187 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 CILP2Q8IUL8 1156 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 OSBPL7Q9BZF2 842 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 AKAP2Q9Y2D5 859 aa7.28□□□□□ -1.24
VPS8-217ENST00000465213 ZNF503-AS2A6NEH8 195 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 FANCGO15287 622 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 TRIM37O94972 964 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 ZP2Q05996 745 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 PPM1JQ5JR12 505 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 DNAJC14Q6Y2X3 702 aaPredicted RBP7.27□□□□□ -1.25
VPS8-217ENST00000465213 ACSBG1Q96GR2 724 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 GZF1Q9H116 711 aaPredicted RBP7.27□□□□□ -1.25
VPS8-217ENST00000465213 PRDM7Q9NQW5 492 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 LMCD1Q9NZU5 365 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 CTNND2Q9UQB3 1225 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 PITPNM2Q9BZ72 1349 aa7.27□□□□□ -1.25
VPS8-217ENST00000465213 LRRC10BA6NIK2 292 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 EOMESO95936 686 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 LDHBP07195 334 aaKnown RBP7.26□□□□□ -1.25
VPS8-217ENST00000465213 BMP6P22004 513 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 IKZF1Q13422 519 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 KCNMB1Q16558 191 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 ZBTB37Q5TC79 503 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 MPRIPQ6WCQ1 1025 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 ANKRD24Q8TF21 1146 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 PPM1HQ9ULR3 514 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 MAPK8IP1Q9UQF2 711 aa7.26□□□□□ -1.25
VPS8-217ENST00000465213 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.25□□□□□ -1.25
VPS8-217ENST00000465213 ENC1O14682 589 aa7.25□□□□□ -1.25
VPS8-217ENST00000465213 ATP2B2Q01814 1243 aa7.25□□□□□ -1.25
VPS8-217ENST00000465213 UBE3DQ7Z6J8 389 aa7.25□□□□□ -1.25
VPS8-217ENST00000465213 KCT2Q8NC54 265 aa7.25□□□□□ -1.25
VPS8-217ENST00000465213 CEP44Q9C0F1 390 aa7.25□□□□□ -1.25
VPS8-217ENST00000465213 CBX8Q9HC52 389 aa7.25□□□□□ -1.25
VPS8-217ENST00000465213 SAMM50Q9Y512 469 aa7.25□□□□□ -1.25
VPS8-217ENST00000465213 GNAT3A8MTJ3 354 aa7.24□□□□□ -1.25
VPS8-217ENST00000465213 GSTT1P30711 240 aa7.24□□□□□ -1.25
VPS8-217ENST00000465213 C22orf34Q6ZV56 151 aa7.24□□□□□ -1.25
VPS8-217ENST00000465213 GRIN3AQ8TCU5 1115 aa7.24□□□□□ -1.25
VPS8-217ENST00000465213 SRCIN1Q9C0H9 1055 aa7.24□□□□□ -1.25
VPS8-217ENST00000465213 DCDC2CA8MYV0 355 aa7.23□□□□□ -1.25
VPS8-217ENST00000465213 GIPC1O14908 333 aa7.23□□□□□ -1.25
VPS8-217ENST00000465213 TSPAN15O95858 294 aa7.23□□□□□ -1.25
VPS8-217ENST00000465213 AFMP43652 599 aa7.23□□□□□ -1.25
VPS8-217ENST00000465213 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
VPS8-217ENST00000465213 NPAS4Q8IUM7 802 aa7.23□□□□□ -1.25
VPS8-217ENST00000465213 PRDM5Q9NQX1 630 aaPredicted RBP7.23□□□□□ -1.25
VPS8-217ENST00000465213 PRPF40AO75400 957 aaKnown RBP7.22□□□□□ -1.25
VPS8-217ENST00000465213 PAGE1O75459 146 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 LRIG2O94898 1065 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 MLANAQ16655 118 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 EAPPQ56P03 285 aaPredicted RBP7.22□□□□□ -1.25
VPS8-217ENST00000465213 LLGL2Q6P1M3 1020 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 ARMCX6Q7L4S7 300 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 C12orf40Q86WS4 652 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 RNF19AQ9NV58 838 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 SPG7Q9UQ90 795 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 CSADQ9Y600 493 aa7.22□□□□□ -1.25
VPS8-217ENST00000465213 GLI1P08151 1106 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 ZNF865P0CJ78 1059 aaPredicted RBP7.21□□□□□ -1.26
VPS8-217ENST00000465213 LRRC14Q15048 493 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 FYB2Q5VWT5 728 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 TPTE2Q6XPS3 522 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 PPP1R16BQ96T49 567 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 C12orf49Q9H741 205 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 PICK1Q9NRD5 415 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 SEMA3GQ9NS98 782 aa7.21□□□□□ -1.26
VPS8-217ENST00000465213 GNA15P30679 374 aa7.2□□□□□ -1.26
VPS8-217ENST00000465213 CAP2P40123 477 aa7.2□□□□□ -1.26
VPS8-217ENST00000465213 CCDC27Q2M243 656 aa7.2□□□□□ -1.26
VPS8-217ENST00000465213 RASIP1Q5U651 963 aa7.2□□□□□ -1.26
VPS8-217ENST00000465213 LIN37Q96GY3 246 aaPredicted RBP7.2□□□□□ -1.26
VPS8-217ENST00000465213 FRMD6Q96NE9 622 aa7.2□□□□□ -1.26
VPS8-217ENST00000465213 TOX2Q96NM4 488 aa7.2□□□□□ -1.26
VPS8-217ENST00000465213 DUSP9Q99956 384 aaKnown RBP7.2□□□□□ -1.26
VPS8-217ENST00000465213 KRTAP4-2Q9BYR5 136 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms