RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CCL5P13501 91 aa27.96■■■□□ 2.07
USP42-205ENST00000465073 TTC39AQ5SRH9 613 aa27.96■■■□□ 2.07
USP42-205ENST00000465073 PROCA1Q8NCQ7 364 aaPredicted RBP27.96■■■□□ 2.07
USP42-205ENST00000465073 HERC5Q9UII4 1024 aaKnown RBP27.96■■■□□ 2.07
USP42-205ENST00000465073 GABRQQ9UN88 632 aa27.96■■■□□ 2.07
USP42-205ENST00000465073 PLCG2P16885 1265 aa27.95■■■□□ 2.07
USP42-205ENST00000465073 CAP2P40123 477 aa27.95■■■□□ 2.07
USP42-205ENST00000465073 GJA8P48165 433 aa27.95■■■□□ 2.07
USP42-205ENST00000465073 NAA16Q6N069 864 aaPredicted RBP27.95■■■□□ 2.07
USP42-205ENST00000465073 SH3RF3Q8TEJ3 882 aaPredicted RBP27.95■■■□□ 2.07
USP42-205ENST00000465073 SHISA4Q96DD7 197 aa27.95■■■□□ 2.07
USP42-205ENST00000465073 SNRKQ9NRH2 765 aa27.95■■■□□ 2.07
USP42-205ENST00000465073 PNMA3Q9UL41 463 aa27.95■■■□□ 2.07
USP42-205ENST00000465073 SURF6O75683 361 aaKnown RBP27.95■■■□□ 2.06
USP42-205ENST00000465073 SPP2Q13103 211 aa27.95■■■□□ 2.06
USP42-205ENST00000465073 ZNF280CQ8ND82 737 aa27.95■■■□□ 2.06
USP42-205ENST00000465073 DBNDD2Q9BQY9 259 aa27.95■■■□□ 2.06
USP42-205ENST00000465073 RNF208Q9H0X6 261 aa27.95■■■□□ 2.06
USP42-205ENST00000465073 DHX36Q9H2U1 1008 aaKnown RBP27.95■■■□□ 2.06
USP42-205ENST00000465073 PI4KBQ9UBF8 816 aa27.95■■■□□ 2.06
USP42-205ENST00000465073 IGSF3O75054 1194 aa27.94■■■□□ 2.06
USP42-205ENST00000465073 TREML2Q5T2D2 321 aa27.94■■■□□ 2.06
USP42-205ENST00000465073 ZNF512BQ96KM6 892 aaPredicted RBP27.94■■■□□ 2.06
USP42-205ENST00000465073 PHIPQ8WWQ0 1821 aa27.94■■■□□ 2.06
USP42-205ENST00000465073 USP17L5A8MUK1 530 aa27.93■■■□□ 2.06
USP42-205ENST00000465073 TNPO2O14787 897 aaKnown RBP27.93■■■□□ 2.06
USP42-205ENST00000465073 ADCY3O60266 1144 aa27.93■■■□□ 2.06
USP42-205ENST00000465073 FLT3LGP49771 235 aa27.93■■■□□ 2.06
USP42-205ENST00000465073 PPP4CP60510 307 aa27.93■■■□□ 2.06
USP42-205ENST00000465073 AATFQ9NY61 560 aaKnown RBP eCLIP27.93■■■□□ 2.06
USP42-205ENST00000465073 NOP58Q9Y2X3 529 aaKnown RBP27.93■■■□□ 2.06
USP42-205ENST00000465073 PTPRFP10586 1907 aa27.92■■■□□ 2.06
USP42-205ENST00000465073 IRF5Q13568 498 aa27.92■■■□□ 2.06
USP42-205ENST00000465073 FTSJ3Q8IY81 847 aaKnown RBP27.92■■■□□ 2.06
USP42-205ENST00000465073 ANKRD13CQ8N6S4 541 aa27.92■■■□□ 2.06
USP42-205ENST00000465073 PXYLP1Q8TE99 480 aa27.92■■■□□ 2.06
USP42-205ENST00000465073 PABPC4Q13310 644 aaKnown RBP eCLIP27.91■■■□□ 2.06
USP42-205ENST00000465073 RRP1BQ14684 758 aaKnown RBP27.91■■■□□ 2.06
USP42-205ENST00000465073 FAM110CQ1W6H9 321 aa27.91■■■□□ 2.06
USP42-205ENST00000465073 CYP2E1P05181 493 aaPredicted RBP27.9■■■□□ 2.06
USP42-205ENST00000465073 COA7Q96BR5 231 aa27.9■■■□□ 2.06
USP42-205ENST00000465073 C1orf115Q9H7X2 142 aa27.9■■■□□ 2.06
USP42-205ENST00000465073 AS3MTQ9HBK9 375 aa27.9■■■□□ 2.06
USP42-205ENST00000465073 H0YGN5 161 aa27.89■■■□□ 2.06
USP42-205ENST00000465073 GCLCP48506 637 aaPredicted RBP27.89■■■□□ 2.06
USP42-205ENST00000465073 HMGCS2P54868 508 aa27.89■■■□□ 2.06
USP42-205ENST00000465073 HNRNPUQ00839 825 aaKnown RBP eCLIP27.89■■■□□ 2.06
USP42-205ENST00000465073 MGAMO43451 1857 aa27.89■■■□□ 2.06
USP42-205ENST00000465073 ZBTB7BO15156 539 aaPredicted RBP27.89■■■□□ 2.05
USP42-205ENST00000465073 SH3D19Q5HYK7 790 aa27.89■■■□□ 2.05
USP42-205ENST00000465073 UBE2Q1Q7Z7E8 422 aa27.89■■■□□ 2.05
USP42-205ENST00000465073 FOXP4Q8IVH2 680 aaPredicted RBP27.89■■■□□ 2.05
USP42-205ENST00000465073 ITPRIPQ8IWB1 547 aa27.89■■■□□ 2.05
USP42-205ENST00000465073 TGFBRAP1Q8WUH2 860 aa27.89■■■□□ 2.05
USP42-205ENST00000465073 UNC93B1Q9H1C4 597 aa27.89■■■□□ 2.05
USP42-205ENST00000465073 CEP290O15078 2479 aa27.88■■■□□ 2.05
USP42-205ENST00000465073 ELNP15502 786 aa27.88■■■□□ 2.05
USP42-205ENST00000465073 U2AF1L4Q8WU68 220 aaKnown RBP27.88■■■□□ 2.05
USP42-205ENST00000465073 WDR18Q9BV38 432 aa27.88■■■□□ 2.05
USP42-205ENST00000465073 COLQQ9Y215 455 aaPredicted RBP27.88■■■□□ 2.05
USP42-205ENST00000465073 ASNSP08243 561 aa27.87■■■□□ 2.05
USP42-205ENST00000465073 CAPN2P17655 700 aa27.87■■■□□ 2.05
USP42-205ENST00000465073 ZAP70P43403 619 aa27.87■■■□□ 2.05
USP42-205ENST00000465073 ADGRA1Q86SQ6 560 aa27.87■■■□□ 2.05
USP42-205ENST00000465073 METTL16Q86W50 562 aaKnown RBP27.87■■■□□ 2.05
USP42-205ENST00000465073 MAPKAPK5Q8IW41 473 aa27.87■■■□□ 2.05
USP42-205ENST00000465073 DPF3Q92784 378 aa27.87■■■□□ 2.05
USP42-205ENST00000465073 DBNLQ9UJU6 430 aaKnown RBP27.87■■■□□ 2.05
USP42-205ENST00000465073 INHAP05111 366 aa27.86■■■□□ 2.05
USP42-205ENST00000465073 HTATIP2Q9BUP3 242 aa27.86■■■□□ 2.05
USP42-205ENST00000465073 ASCC2Q9H1I8 757 aaPredicted RBP27.86■■■□□ 2.05
USP42-205ENST00000465073 PIH1D3Q9NQM4 214 aaKnown RBP27.86■■■□□ 2.05
USP42-205ENST00000465073 FLT1P17948 1338 aa27.86■■■□□ 2.05
USP42-205ENST00000465073 SGPL1O95470 568 aa27.85■■■□□ 2.05
USP42-205ENST00000465073 RLBP1P12271 317 aa27.85■■■□□ 2.05
USP42-205ENST00000465073 GINM1Q9NU53 330 aa27.85■■■□□ 2.05
USP42-205ENST00000465073 CRACR2BQ8N4Y2 399 aaPredicted RBP27.84■■■□□ 2.05
USP42-205ENST00000465073 TRIM34Q9BYJ4 488 aa27.84■■■□□ 2.05
USP42-205ENST00000465073 BACE1P56817 501 aa27.83■■■□□ 2.05
USP42-205ENST00000465073 EAF2Q96CJ1 260 aaPredicted RBP27.83■■■□□ 2.05
USP42-205ENST00000465073 CCDC8Q9H0W5 538 aaPredicted RBP27.83■■■□□ 2.05
USP42-205ENST00000465073 PALD1Q9ULE6 856 aa27.83■■■□□ 2.05
USP42-205ENST00000465073 FARP2O94887 1054 aaPredicted RBP27.83■■■□□ 2.04
USP42-205ENST00000465073 FXR1P51114 621 aaKnown RBP eCLIP27.83■■■□□ 2.04
USP42-205ENST00000465073 MTMR2Q13614 643 aa27.83■■■□□ 2.04
USP42-205ENST00000465073 DNAJC18Q9H819 358 aa27.83■■■□□ 2.04
USP42-205ENST00000465073 TLR7Q9NYK1 1049 aaKnown RBP27.83■■■□□ 2.04
USP42-205ENST00000465073 TMOD4Q9NZQ9 345 aa27.83■■■□□ 2.04
USP42-205ENST00000465073 TAOK2Q9UL54 1235 aa27.83■■■□□ 2.04
USP42-205ENST00000465073 LOC285556D6RIA3 1793 aa27.82■■■□□ 2.04
USP42-205ENST00000465073 MAST2Q6P0Q8 1798 aa27.82■■■□□ 2.04
USP42-205ENST00000465073 CYP7A1P22680 504 aa27.82■■■□□ 2.04
USP42-205ENST00000465073 CERS3Q8IU89 383 aa27.82■■■□□ 2.04
USP42-205ENST00000465073 C19orf81C9J6K1 198 aa27.81■■■□□ 2.04
USP42-205ENST00000465073 HLA-DOAP06340 250 aa27.81■■■□□ 2.04
USP42-205ENST00000465073 HOXA7P31268 230 aaPredicted RBP27.81■■■□□ 2.04
USP42-205ENST00000465073 JAG1P78504 1218 aa27.81■■■□□ 2.04
USP42-205ENST00000465073 MORF4L1Q9UBU8 362 aa27.81■■■□□ 2.04
USP42-205ENST00000465073 ATAD5Q96QE3 1844 aa27.8■■■□□ 2.04
USP42-205ENST00000465073 IDH1O75874 414 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms