RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF507Q8TCN5 953 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 LRRC3Q9BY71 257 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 WNT10AQ9GZT5 417 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 CSADQ9Y600 493 aa9.91□□□□□ -0.82
PTCD3-205ENST00000464541 HDLBPQ00341 1268 aaKnown RBP9.9□□□□□ -0.82
PTCD3-205ENST00000464541 PDE4BQ07343 736 aa9.9□□□□□ -0.82
PTCD3-205ENST00000464541 CPSF6Q16630 551 aaKnown RBP eCLIP9.9□□□□□ -0.82
PTCD3-205ENST00000464541 PRSS36Q5K4E3 855 aa9.9□□□□□ -0.82
PTCD3-205ENST00000464541 ZNF296Q8WUU4 475 aaPredicted RBP9.9□□□□□ -0.82
PTCD3-205ENST00000464541 PRKAG2Q9UGJ0 569 aa9.9□□□□□ -0.82
PTCD3-205ENST00000464541 ADAMTS1Q9UHI8 967 aa9.9□□□□□ -0.82
PTCD3-205ENST00000464541 DDX41Q9UJV9 622 aaKnown RBP9.9□□□□□ -0.82
PTCD3-205ENST00000464541 PRAMEF27A3QJZ7 478 aa9.89□□□□□ -0.83
PTCD3-205ENST00000464541 CDC37L1Q7L3B6 337 aa9.89□□□□□ -0.83
PTCD3-205ENST00000464541 ZNF654Q8IZM8 581 aa9.89□□□□□ -0.83
PTCD3-205ENST00000464541 SSU72Q9NP77 194 aaKnown RBP9.89□□□□□ -0.83
PTCD3-205ENST00000464541 TCF3P15923 654 aa9.88□□□□□ -0.83
PTCD3-205ENST00000464541 KIAA0825Q8IV33 1275 aa9.88□□□□□ -0.83
PTCD3-205ENST00000464541 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
PTCD3-205ENST00000464541 SPON2Q9BUD6 331 aa9.88□□□□□ -0.83
PTCD3-205ENST00000464541 NT5C1AQ9BXI3 368 aa9.88□□□□□ -0.83
PTCD3-205ENST00000464541 CAP2P40123 477 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 CDK8P49336 464 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 ETF1P62495 437 aaKnown RBP9.87□□□□□ -0.83
PTCD3-205ENST00000464541 CWF19L2Q2TBE0 894 aaKnown RBP9.87□□□□□ -0.83
PTCD3-205ENST00000464541 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 ZAR1Q86SH2 424 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 NT5DC4Q86YG4 428 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 HID1Q8IV36 788 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 METTL22Q9BUU2 404 aaPredicted RBP9.87□□□□□ -0.83
PTCD3-205ENST00000464541 C1GALT1Q9NS00 363 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 ADAM30Q9UKF2 790 aa9.87□□□□□ -0.83
PTCD3-205ENST00000464541 PRR36Q9H6K5 1346 aa9.86□□□□□ -0.83
PTCD3-205ENST00000464541 CYP27A1Q02318 531 aa9.86□□□□□ -0.83
PTCD3-205ENST00000464541 ZNF394Q53GI3 561 aa9.86□□□□□ -0.83
PTCD3-205ENST00000464541 GRK4P32298 578 aa9.85□□□□□ -0.83
PTCD3-205ENST00000464541 GATA6Q92908 595 aa9.85□□□□□ -0.83
PTCD3-205ENST00000464541 MFSD14AQ96MC6 490 aa9.85□□□□□ -0.83
PTCD3-205ENST00000464541 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
PTCD3-205ENST00000464541 PSMG3-AS1Q96PY0 264 aa9.85□□□□□ -0.83
PTCD3-205ENST00000464541 TGIF2Q9GZN2 237 aa9.85□□□□□ -0.83
PTCD3-205ENST00000464541 PCDHGB7Q9Y5F8 929 aa9.85□□□□□ -0.83
PTCD3-205ENST00000464541 DYNC1LI2O43237 492 aaPredicted RBP9.84□□□□□ -0.83
PTCD3-205ENST00000464541 LRIG2O94898 1065 aa9.84□□□□□ -0.83
PTCD3-205ENST00000464541 ITGB7P26010 798 aa9.84□□□□□ -0.83
PTCD3-205ENST00000464541 RACK1P63244 317 aaKnown RBP9.84□□□□□ -0.83
PTCD3-205ENST00000464541 PGRP06401 933 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 APOBRQ0VD83 1088 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 TMEM201Q5SNT2 666 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 OGFOD3Q6PK18 319 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 ZDHHC13Q8IUH4 622 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 SHKBP1Q8TBC3 707 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 SPATA32Q96LK8 384 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 ATG3Q9NT62 314 aa9.83□□□□□ -0.84
PTCD3-205ENST00000464541 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.83□□□□□ -0.84
PTCD3-205ENST00000464541 F13BP05160 661 aa9.82□□□□□ -0.84
PTCD3-205ENST00000464541 SLITRK4Q8IW52 837 aa9.82□□□□□ -0.84
PTCD3-205ENST00000464541 MRPL41Q8IXM3 137 aaKnown RBP9.82□□□□□ -0.84
PTCD3-205ENST00000464541 REXO1Q8N1G1 1221 aaKnown RBP9.82□□□□□ -0.84
PTCD3-205ENST00000464541 FBXO27Q8NI29 283 aa9.82□□□□□ -0.84
PTCD3-205ENST00000464541 ADMP35318 185 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 SLBPQ14493 270 aaKnown RBP eCLIP9.81□□□□□ -0.84
PTCD3-205ENST00000464541 CYP27C1Q4G0S4 372 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 DUSP27Q5VZP5 1158 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 SLC6A19Q695T7 634 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 ARMCX6Q7L4S7 300 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 FBXL6Q8N531 539 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 MFSD2AQ8NA29 543 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 EAF1Q96JC9 268 aaPredicted RBP9.81□□□□□ -0.84
PTCD3-205ENST00000464541 OSBPL1AQ9BXW6 950 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 FOXQ1Q9C009 403 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 FBRSQ9HAH7 460 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 LGR6Q9HBX8 967 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 IGSF5Q9NSI5 407 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 UBP1Q9NZI7 540 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 RNF112Q9ULX5 631 aa9.81□□□□□ -0.84
PTCD3-205ENST00000464541 POLR3KQ9Y2Y1 108 aaPredicted RBP9.81□□□□□ -0.84
PTCD3-205ENST00000464541 WDR64B1ANS9 1081 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 TLR3O15455 904 aaKnown RBP9.8□□□□□ -0.84
PTCD3-205ENST00000464541 ATE1O95260 518 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 CST3P01034 146 aaPredicted RBP9.8□□□□□ -0.84
PTCD3-205ENST00000464541 PLCG1P19174 1290 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 CRKP46108 304 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 RAD51AP2Q09MP3 1159 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 CDK5R2Q13319 367 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 MLECQ14165 292 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 C9orf131Q5VYM1 1079 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 UBE3DQ7Z6J8 389 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 MCATQ8IVS2 390 aaKnown RBP9.8□□□□□ -0.84
PTCD3-205ENST00000464541 NKD1Q969G9 470 aa9.8□□□□□ -0.84
PTCD3-205ENST00000464541 ZNF165P49910 485 aa9.79□□□□□ -0.84
PTCD3-205ENST00000464541 COL9A2Q14055 689 aaPredicted RBP9.79□□□□□ -0.84
PTCD3-205ENST00000464541 TMEM87BQ96K49 555 aa9.79□□□□□ -0.84
PTCD3-205ENST00000464541 CCSER2Q9H7U1 834 aa9.79□□□□□ -0.84
PTCD3-205ENST00000464541 EHMT1Q9H9B1 1298 aa9.79□□□□□ -0.84
PTCD3-205ENST00000464541 BRMS1Q9HCU9 246 aa9.79□□□□□ -0.84
PTCD3-205ENST00000464541 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
PTCD3-205ENST00000464541 TJP2Q9UDY2 1190 aa9.79□□□□□ -0.84
PTCD3-205ENST00000464541 HTR3BO95264 441 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 FAM87AP0C7U9 286 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms