RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 A0A1W2PPC1 479 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 SRGAP3O43295 1099 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 NPM3O75607 178 aaKnown RBP11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 MAP4K4O95819 1239 aaPredicted RBP11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 GCLCP48506 637 aaPredicted RBP11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 HMGCS2P54868 508 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 GORABQ5T7V8 394 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 NECAB2Q7Z6G3 386 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 RAI14Q9P0K7 980 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 STAP2Q9UGK3 403 aa11.21□□□□□ -0.61
RN7SL541P-201ENST00000464317 USP17L5A8MUK1 530 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 HMGCRP04035 888 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 GNAI3P08754 354 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 CT47B1P0C2W7 299 aaPredicted RBP11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 CAP2P40123 477 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 SPATA5Q8NB90 893 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 NSUN4Q96CB9 384 aaKnown RBP11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 AS3MTQ9HBK9 375 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 HMG20BQ9P0W2 317 aa11.2□□□□□ -0.62
RN7SL541P-201ENST00000464317 PHIPQ8WWQ0 1821 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 PI16Q6UXB8 463 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 LRP2BPQ9P2M1 347 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 HERC5Q9UII4 1024 aaKnown RBP11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 PTPRFP10586 1907 aa11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
RN7SL541P-201ENST00000464317 RPTORQ8N122 1335 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 SOX1O00570 391 aaPredicted RBP11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 SH3D19Q5HYK7 790 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 LRCH3Q96II8 777 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 TMOD4Q9NZQ9 345 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 PI4KBQ9UBF8 816 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 GJD2Q9UKL4 321 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 SZT2Q5T011 3432 aa11.18□□□□□ -0.62
RN7SL541P-201ENST00000464317 UQCRFS1P1P0C7P4 283 aa11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 ARID4AP29374 1257 aaPredicted RBP11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 TRIM32Q13049 653 aa11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 G3BP1Q13283 466 aaKnown RBP eCLIP11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 MTX1Q13505 466 aa11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 MTMR2Q13614 643 aa11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 SH3RF3Q8TEJ3 882 aaPredicted RBP11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 DHX36Q9H2U1 1008 aaKnown RBP11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 MORF4L1Q9UBU8 362 aa11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.17□□□□□ -0.62
RN7SL541P-201ENST00000464317 DLL1O00548 723 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 BAG3O95817 575 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 ASNSP08243 561 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 CYP2B6P20813 491 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 BMP8BP34820 402 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 MCAMP43121 646 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 RARSP54136 660 aaKnown RBP11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 BACE1P56817 501 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 GPRC5AQ8NFJ5 357 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 TRIB2Q92519 343 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 ARHGAP45Q92619 1136 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 GDF15Q99988 308 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 WDR18Q9BV38 432 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 AATFQ9NY61 560 aaKnown RBP eCLIP11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 RANBP2P49792 3224 aaKnown RBP11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 LOC285556D6RIA3 1793 aa11.16□□□□□ -0.62
RN7SL541P-201ENST00000464317 DOCK3Q8IZD9 2030 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 C19orf81C9J6K1 198 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 GNAI2P04899 355 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 PLCG2P16885 1265 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 SYN1P17600 705 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 HOXA7P31268 230 aaPredicted RBP11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 HERVK_113P62684 666 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 TTC39AQ5SRH9 613 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 NAA16Q6N069 864 aaPredicted RBP11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 CCAR1Q8IX12 1150 aaKnown RBP11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 CRACR2BQ8N4Y2 399 aaPredicted RBP11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 SOCS4Q8WXH5 440 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 P2RX7Q99572 595 aaKnown RBP11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 SNRKQ9NRH2 765 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 OGDHLQ9ULD0 1010 aa11.15□□□□□ -0.62
RN7SL541P-201ENST00000464317 USP17L10C9JJH3 530 aa11.14□□□□□ -0.63
RN7SL541P-201ENST00000464317 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms