RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PHF20L1A8MW92 1017 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 F6X3S4 739 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 BCAMP50895 628 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 NFIAQ12857 509 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 ANKLE1Q8NAG6 615 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 TMOD2Q9NZR1 351 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 BIN2Q9UBW5 565 aaPredicted RBP9.77□□□□□ -0.85
SMC3-202ENST00000462899 FAM198AQ9UFP1 575 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 UTYO14607 1347 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 MAST3O60307 1309 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 MROH5Q6ZUA9 1318 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 SIPA1L1O43166 1804 aa9.77□□□□□ -0.85
SMC3-202ENST00000462899 VAMP4O75379 141 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 MAGEA10P43363 369 aaPredicted RBP9.76□□□□□ -0.85
SMC3-202ENST00000462899 MAP3K10Q02779 954 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 CHAF1AQ13111 956 aaPredicted RBP9.76□□□□□ -0.85
SMC3-202ENST00000462899 RABL6Q3YEC7 729 aaPredicted RBP9.76□□□□□ -0.85
SMC3-202ENST00000462899 NECAB2Q7Z6G3 386 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 WWC1Q8IX03 1113 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 TDHQ8IZJ6 230 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMC3-202ENST00000462899 PRKRIP1Q9H875 184 aaPredicted RBP9.76□□□□□ -0.85
SMC3-202ENST00000462899 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 AFG3L2Q9Y4W6 797 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
SMC3-202ENST00000462899 CDK5RAP2Q96SN8 1893 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 TFRCP02786 760 aaKnown RBP9.75□□□□□ -0.85
SMC3-202ENST00000462899 PTPRAP18433 802 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 FGFR2P21802 821 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 LRRC24Q50LG9 513 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 CDC42EP5Q6NZY7 148 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 C7orf61Q8IZ16 206 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 SUCLG2Q96I99 432 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 GUCD1Q96NT3 240 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 ZMYND8Q9ULU4 1186 aaPredicted RBP9.75□□□□□ -0.85
SMC3-202ENST00000462899 RLFQ13129 1914 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 PFASO15067 1338 aa9.75□□□□□ -0.85
SMC3-202ENST00000462899 TNPO2O14787 897 aaKnown RBP9.74□□□□□ -0.85
SMC3-202ENST00000462899 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 PDE8BO95263 885 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 FAM110CQ1W6H9 321 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 FASTKD5Q7L8L6 764 aaKnown RBP9.74□□□□□ -0.85
SMC3-202ENST00000462899 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMC3-202ENST00000462899 ZFPM1Q8IX07 1006 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 SCYL3Q8IZE3 742 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 ANKRD44Q8N8A2 993 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 OGDHLQ9ULD0 1010 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 FOCADQ5VW36 1801 aa9.74□□□□□ -0.85
SMC3-202ENST00000462899 HMGCRP04035 888 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 NBPF7P0C2Y1 421 aaPredicted RBP9.73□□□□□ -0.85
SMC3-202ENST00000462899 COL6A1P12109 1028 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 TCP10Q12799 353 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 TRIM32Q13049 653 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 DDX10Q13206 875 aaKnown RBP9.73□□□□□ -0.85
SMC3-202ENST00000462899 DIXDC1Q155Q3 683 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 CAVIN4Q5BKX8 364 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 MAP3K21Q5TCX8 1036 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 FAM109BQ6ICB4 259 aaPredicted RBP9.73□□□□□ -0.85
SMC3-202ENST00000462899 SH3BP5LQ7L8J4 393 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 VPS37DQ86XT2 251 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 LARP6Q9BRS8 491 aaKnown RBP9.73□□□□□ -0.85
SMC3-202ENST00000462899 GJD2Q9UKL4 321 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 AGTPBP1Q9UPW5 1226 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 REV3LO60673 3130 aa9.73□□□□□ -0.85
SMC3-202ENST00000462899 NCOR1O75376 2440 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 SLURP2P0DP57 97 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 SYN1P17600 705 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 PRDX5P30044 214 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 DSG2Q14126 1118 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 ANKRD13CQ8N6S4 541 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 IDI2Q9BXS1 227 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 NBPF3Q9H094 633 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 BICC1Q9H694 974 aaKnown RBP9.72□□□□□ -0.85
SMC3-202ENST00000462899 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
SMC3-202ENST00000462899 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.72□□□□□ -0.85
SMC3-202ENST00000462899 ZHX2Q9Y6X8 837 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 RPTORQ8N122 1335 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 CHD9Q3L8U1 2897 aa9.72□□□□□ -0.85
SMC3-202ENST00000462899 METTL24Q5JXM2 366 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 TREML2Q5T2D2 321 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 WDR66Q8TBY9 1149 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 TRIB2Q92519 343 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 COA7Q96BR5 231 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 C11orf49Q9H6J7 331 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 BDP1A6H8Y1 2624 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 GAKO14976 1311 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 SALL1Q9NSC2 1324 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 XIRP2A4UGR9 3374 aa9.71□□□□□ -0.86
SMC3-202ENST00000462899 ENTPD3O75355 529 aa9.7□□□□□ -0.86
SMC3-202ENST00000462899 FRAT2O75474 233 aaPredicted RBP9.7□□□□□ -0.86
SMC3-202ENST00000462899 PDE4AP27815 886 aa9.7□□□□□ -0.86
SMC3-202ENST00000462899 RFX5P48382 616 aaPredicted RBP9.7□□□□□ -0.86
SMC3-202ENST00000462899 EXOSC9Q06265 439 aaKnown RBP9.7□□□□□ -0.86
SMC3-202ENST00000462899 PUM3Q15397 648 aaKnown RBP9.7□□□□□ -0.86
SMC3-202ENST00000462899 GADL1Q6ZQY3 521 aa9.7□□□□□ -0.86
SMC3-202ENST00000462899 PROCA1Q8NCQ7 364 aaPredicted RBP9.7□□□□□ -0.86
SMC3-202ENST00000462899 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
SMC3-202ENST00000462899 SMCR8Q8TEV9 937 aaPredicted RBP9.7□□□□□ -0.86
SMC3-202ENST00000462899 UBE2OQ9C0C9 1292 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms