RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 HABP4Q5JVS0 413 aaKnown RBP18.08■□□□□ 0.48
SMPD4-216ENST00000461187 TEX11Q8IYF3 940 aa18.08■□□□□ 0.48
SMPD4-216ENST00000461187 SHISA4Q96DD7 197 aa18.08■□□□□ 0.48
SMPD4-216ENST00000461187 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.48
SMPD4-216ENST00000461187 SNRKQ9NRH2 765 aa18.08■□□□□ 0.48
SMPD4-216ENST00000461187 GABRQQ9UN88 632 aa18.08■□□□□ 0.48
SMPD4-216ENST00000461187 FPGT-TNNI3KV9GXZ4 949 aa18.08■□□□□ 0.48
SMPD4-216ENST00000461187 ALPK3Q96L96 1907 aa18.08■□□□□ 0.48
SMPD4-216ENST00000461187 SH3RF3Q8TEJ3 882 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-216ENST00000461187 AGTPBP1Q9UPW5 1226 aa18.07■□□□□ 0.48
SMPD4-216ENST00000461187 RRP1BQ14684 758 aaKnown RBP18.06■□□□□ 0.48
SMPD4-216ENST00000461187 TTC39AQ5SRH9 613 aa18.06■□□□□ 0.48
SMPD4-216ENST00000461187 TREML2Q5T2D2 321 aa18.06■□□□□ 0.48
SMPD4-216ENST00000461187 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
SMPD4-216ENST00000461187 SURF6O75683 361 aaKnown RBP18.05■□□□□ 0.48
SMPD4-216ENST00000461187 CYP2E1P05181 493 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-216ENST00000461187 CCL5P13501 91 aa18.05■□□□□ 0.48
SMPD4-216ENST00000461187 CAP2P40123 477 aa18.05■□□□□ 0.48
SMPD4-216ENST00000461187 SPP2Q13103 211 aa18.05■□□□□ 0.48
SMPD4-216ENST00000461187 OS9Q13438 667 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-216ENST00000461187 CCDC158Q5M9N0 1113 aa18.05■□□□□ 0.48
SMPD4-216ENST00000461187 PROCA1Q8NCQ7 364 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-216ENST00000461187 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
SMPD4-216ENST00000461187 SMCR8Q8TEV9 937 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-216ENST00000461187 AATFQ9NY61 560 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMPD4-216ENST00000461187 HERC5Q9UII4 1024 aaKnown RBP18.05■□□□□ 0.48
SMPD4-216ENST00000461187 MYH8P13535 1937 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 GJB1P08034 283 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 RLBP1P12271 317 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 GJA8P48165 433 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 PPP4CP60510 307 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 HNRNPUQ00839 825 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMPD4-216ENST00000461187 NAA16Q6N069 864 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-216ENST00000461187 ADGRA1Q86SQ6 560 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 ZNF280CQ8ND82 737 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 ZNF512BQ96KM6 892 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-216ENST00000461187 NOL10Q9BSC4 688 aaKnown RBP18.04■□□□□ 0.48
SMPD4-216ENST00000461187 TBC1D2Q9BYX2 928 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 PI4KBQ9UBF8 816 aa18.04■□□□□ 0.48
SMPD4-216ENST00000461187 BIN2Q9UBW5 565 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-216ENST00000461187 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
SMPD4-216ENST00000461187 ZBTB7BO15156 539 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-216ENST00000461187 BAG3O95817 575 aa18.03■□□□□ 0.48
SMPD4-216ENST00000461187 FLT3LGP49771 235 aa18.03■□□□□ 0.48
SMPD4-216ENST00000461187 UBXN2AP68543 259 aa18.03■□□□□ 0.48
SMPD4-216ENST00000461187 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
SMPD4-216ENST00000461187 ANKRD13CQ8N6S4 541 aa18.03■□□□□ 0.48
SMPD4-216ENST00000461187 NKX2-3Q8TAU0 364 aa18.03■□□□□ 0.48
SMPD4-216ENST00000461187 RNF208Q9H0X6 261 aa18.03■□□□□ 0.48
SMPD4-216ENST00000461187 DHX36Q9H2U1 1008 aaKnown RBP18.03■□□□□ 0.48
SMPD4-216ENST00000461187 PNMA3Q9UL41 463 aa18.03■□□□□ 0.48
SMPD4-216ENST00000461187 USP17L5A8MUK1 530 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 TNPO2O14787 897 aaKnown RBP18.02■□□□□ 0.48
SMPD4-216ENST00000461187 ADCY3O60266 1144 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 PLCG2P16885 1265 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 ZAP70P43403 619 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 HMGCS2P54868 508 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 UBE2Q1Q7Z7E8 422 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 ITPRIPQ8IWB1 547 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 TGFBRAP1Q8WUH2 860 aa18.02■□□□□ 0.48
SMPD4-216ENST00000461187 DBNLQ9UJU6 430 aaKnown RBP18.02■□□□□ 0.48
SMPD4-216ENST00000461187 FLT1P17948 1338 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 NAV1Q8NEY1 1877 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 ELNP15502 786 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 IRF5Q13568 498 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 FAM110CQ1W6H9 321 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 SH3D19Q5HYK7 790 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 METTL16Q86W50 562 aaKnown RBP18.01■□□□□ 0.47
SMPD4-216ENST00000461187 MAPKAPK5Q8IW41 473 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 PXYLP1Q8TE99 480 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 UNC93B1Q9H1C4 597 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 DNAJC18Q9H819 358 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 PIH1D3Q9NQM4 214 aaKnown RBP18.01■□□□□ 0.47
SMPD4-216ENST00000461187 TLR7Q9NYK1 1049 aaKnown RBP18.01■□□□□ 0.47
SMPD4-216ENST00000461187 MYH7P12883 1935 aa18.01■□□□□ 0.47
SMPD4-216ENST00000461187 H0YGN5 161 aa18■□□□□ 0.47
SMPD4-216ENST00000461187 IGSF3O75054 1194 aa18■□□□□ 0.47
SMPD4-216ENST00000461187 MIER1Q8N108 512 aa18■□□□□ 0.47
SMPD4-216ENST00000461187 EAF2Q96CJ1 260 aaPredicted RBP18■□□□□ 0.47
SMPD4-216ENST00000461187 CCDC8Q9H0W5 538 aaPredicted RBP18■□□□□ 0.47
SMPD4-216ENST00000461187 AS3MTQ9HBK9 375 aa18■□□□□ 0.47
SMPD4-216ENST00000461187 COLQQ9Y215 455 aaPredicted RBP18■□□□□ 0.47
SMPD4-216ENST00000461187 DDX60LQ5H9U9 1706 aaKnown RBP17.99■□□□□ 0.47
SMPD4-216ENST00000461187 INHAP05111 366 aa17.99■□□□□ 0.47
SMPD4-216ENST00000461187 GCLCP48506 637 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-216ENST00000461187 JAG1P78504 1218 aa17.99■□□□□ 0.47
SMPD4-216ENST00000461187 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMPD4-216ENST00000461187 FOXP4Q8IVH2 680 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-216ENST00000461187 U2AF1L4Q8WU68 220 aaKnown RBP17.99■□□□□ 0.47
SMPD4-216ENST00000461187 COA7Q96BR5 231 aa17.99■□□□□ 0.47
SMPD4-216ENST00000461187 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
SMPD4-216ENST00000461187 ASCC2Q9H1I8 757 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-216ENST00000461187 PALD1Q9ULE6 856 aa17.99■□□□□ 0.47
SMPD4-216ENST00000461187 RANBP2P49792 3224 aaKnown RBP17.98■□□□□ 0.47
SMPD4-216ENST00000461187 SGPL1O95470 568 aa17.98■□□□□ 0.47
SMPD4-216ENST00000461187 ASNSP08243 561 aa17.98■□□□□ 0.47
SMPD4-216ENST00000461187 DYNLL1P63167 89 aaKnown RBP17.98■□□□□ 0.47
SMPD4-216ENST00000461187 SHROOM1Q2M3G4 852 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-216ENST00000461187 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
SMPD4-216ENST00000461187 BAZ2AQ9UIF9 1905 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms