RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 OSBP2Q969R2 916 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 MTA3Q9BTC8 594 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 BRIP1Q9BX63 1249 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 SH2B1Q9NRF2 756 aaPredicted RBP9.77□□□□□ -0.84
HDAC9-219ENST00000461159 MTMR7Q9Y216 660 aa9.77□□□□□ -0.84
HDAC9-219ENST00000461159 ZNF804BA4D1E1 1349 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 RFX7Q2KHR2 1363 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 MYO1CO00159 1063 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 HIP1O00291 1037 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
HDAC9-219ENST00000461159 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 EIF3JO75822 258 aaKnown RBP9.77□□□□□ -0.85
HDAC9-219ENST00000461159 PRPF40BQ6NWY9 871 aaKnown RBP9.77□□□□□ -0.85
HDAC9-219ENST00000461159 KCTD17Q8N5Z5 321 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 ANKRD20A12PQ8NF67 263 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 RBM17Q96I25 401 aaKnown RBP9.77□□□□□ -0.85
HDAC9-219ENST00000461159 CEP89Q96ST8 783 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 PUS7LQ9H0K6 701 aaKnown RBP9.77□□□□□ -0.85
HDAC9-219ENST00000461159 MED23Q9ULK4 1368 aa9.77□□□□□ -0.85
HDAC9-219ENST00000461159 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 UFL1O94874 794 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 SETSIPP0DME0 302 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 SPC24Q8NBT2 197 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 FAM200AQ8TCP9 573 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 MAF1Q9H063 256 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 KCNF1Q9H3M0 494 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 ETAA1Q9NY74 926 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 PYCARDQ9ULZ3 195 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 CCDC171Q6TFL3 1326 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 M0R2C6 588 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 CCP110O43303 1012 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 CTIFO43310 598 aaKnown RBP9.76□□□□□ -0.85
HDAC9-219ENST00000461159 CASTP20810 708 aaKnown RBP9.76□□□□□ -0.85
HDAC9-219ENST00000461159 GJB2P29033 226 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 MAGEA8P43361 318 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 DNM1Q05193 864 aaKnown RBP9.76□□□□□ -0.85
HDAC9-219ENST00000461159 UBE4AQ14139 1066 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 CDC37Q16543 378 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-219ENST00000461159 CAVIN4Q5BKX8 364 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 ZNF280DQ6N043 979 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 C2CD5Q86YS7 1000 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 POLLQ9UGP5 575 aa9.76□□□□□ -0.85
HDAC9-219ENST00000461159 RBM8AQ9Y5S9 174 aaKnown RBP9.76□□□□□ -0.85
HDAC9-219ENST00000461159 CAND2O75155 1236 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 GYS2P54840 703 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 NECTIN1Q15223 517 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 MAP3K11Q16584 847 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 NOM1Q5C9Z4 860 aaKnown RBP9.75□□□□□ -0.85
HDAC9-219ENST00000461159 MCTP2Q6DN12 878 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 CCDC83Q8IWF9 413 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 ACRBPQ8NEB7 543 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
HDAC9-219ENST00000461159 MAP4K1Q92918 833 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 PDRG1Q9NUG6 133 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 MTMR6Q9Y217 621 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 FOXP2O15409 715 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 RNF113AO15541 343 aaKnown RBP9.75□□□□□ -0.85
HDAC9-219ENST00000461159 ERCC3P19447 782 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 HIBADHP31937 336 aaKnown RBP9.75□□□□□ -0.85
HDAC9-219ENST00000461159 KRT85P78386 507 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 MAGEB6Q8N7X4 407 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 MIGA1Q8NAN2 632 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 TATDN2Q93075 761 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 TCEANC2Q96MN5 208 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 LRP2BPQ9P2M1 347 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 A0A1B0GUL6 1792 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 MAST3O60307 1309 aa9.75□□□□□ -0.85
HDAC9-219ENST00000461159 VPS37CA5D8V6 355 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 PPEF1O14829 653 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 AP5Z1O43299 807 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 ADCY2Q08462 1091 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 TTC31Q49AM3 519 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 MCMDC2Q4G0Z9 681 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 TTLL5Q6EMB2 1281 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 TM6SF1Q9BZW5 370 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 NUP62CLQ9H1M0 184 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 CYP46A1Q9Y6A2 500 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 ANKRD31Q8N7Z5 1873 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 ZNF532Q9HCE3 1301 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 KLRG2A4D1S0 409 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 H0YIN7 160 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 PPFIA2O75334 1257 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 FAM163BP0C2L3 166 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 UQCRFS1P1P0C7P4 283 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 HOXA10P31260 410 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 PDE6BP35913 854 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 STK11IPQ8N1F8 1099 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 ANKRD2Q9GZV1 360 aa9.74□□□□□ -0.85
HDAC9-219ENST00000461159 CWC15Q9P013 229 aaKnown RBP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 COL1A1P02452 1464 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-219ENST00000461159 BBOX1O75936 387 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 SKILP12757 684 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 PDCP20941 246 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 HMGB2P26583 209 aaKnown RBP9.73□□□□□ -0.85
HDAC9-219ENST00000461159 PRDX5P30044 214 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 HAND2P61296 217 aa9.73□□□□□ -0.85
HDAC9-219ENST00000461159 SART3Q15020 963 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms