RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 WDR66Q8TBY9 1149 aa16.17■□□□□ 0.18
PTPRN-210ENST00000460801 MRPS27Q92552 414 aaKnown RBP16.17■□□□□ 0.18
PTPRN-210ENST00000460801 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.17■□□□□ 0.18
PTPRN-210ENST00000460801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPRN-210ENST00000460801 UBE2Q2LH0YL09 131 aa16.16■□□□□ 0.18
PTPRN-210ENST00000460801 ST5P78524 1137 aa16.16■□□□□ 0.18
PTPRN-210ENST00000460801 TRIM29Q14134 588 aa16.16■□□□□ 0.18
PTPRN-210ENST00000460801 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
PTPRN-210ENST00000460801 CRACR2BQ8N4Y2 399 aaPredicted RBP16.16■□□□□ 0.18
PTPRN-210ENST00000460801 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
PTPRN-210ENST00000460801 ZSCAN10Q96SZ4 725 aaPredicted RBP16.16■□□□□ 0.18
PTPRN-210ENST00000460801 ORC4O43929 436 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 TRIM37O94972 964 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
PTPRN-210ENST00000460801 ANO6Q4KMQ2 910 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 SBK1Q52WX2 424 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 TRIM22Q8IYM9 498 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 FMR1NBQ8N0W7 255 aaPredicted RBP16.15■□□□□ 0.18
PTPRN-210ENST00000460801 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
PTPRN-210ENST00000460801 KINO60870 393 aaKnown RBP16.15■□□□□ 0.18
PTPRN-210ENST00000460801 MSNP26038 577 aaKnown RBP16.15■□□□□ 0.18
PTPRN-210ENST00000460801 GUCY1A2P33402 732 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 SLC39A14Q15043 492 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 DZIP1Q86YF9 867 aaKnown RBP16.15■□□□□ 0.18
PTPRN-210ENST00000460801 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPRN-210ENST00000460801 JAG2Q9Y219 1238 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 ZKSCAN5Q9Y2L8 839 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 LAMB1P07942 1786 aa16.15■□□□□ 0.18
PTPRN-210ENST00000460801 DLEC1Q9Y238 1755 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 AP5Z1O43299 807 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 GPSM2P81274 684 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 ZNF804AQ7Z570 1209 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 CBX8Q9HC52 389 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 ARPP21Q9UBL0 812 aaPredicted RBP16.14■□□□□ 0.17
PTPRN-210ENST00000460801 PRDM1O75626 825 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 DEXIO95424 95 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 CAVIN2O95810 425 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 LDHBP07195 334 aaKnown RBP16.14■□□□□ 0.17
PTPRN-210ENST00000460801 AXDND1Q5T1B0 1012 aaPredicted RBP16.14■□□□□ 0.17
PTPRN-210ENST00000460801 IQCA1Q86XH1 822 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 NUP133Q8WUM0 1156 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 RBM17Q96I25 401 aaKnown RBP16.14■□□□□ 0.17
PTPRN-210ENST00000460801 EP400Q96L91 3159 aa16.14■□□□□ 0.17
PTPRN-210ENST00000460801 A0A1B0GVL5 298 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 HOXA10P31260 410 aaPredicted RBP16.13■□□□□ 0.17
PTPRN-210ENST00000460801 DDR1Q08345 913 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 GNL2Q13823 731 aaKnown RBP16.13■□□□□ 0.17
PTPRN-210ENST00000460801 LUZP1Q86V48 1076 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 PROM2Q8N271 834 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
PTPRN-210ENST00000460801 BBOX1O75936 387 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 MMP1P03956 469 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 NDUFA8P51970 172 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 EVX2Q03828 476 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 PTPAQ15257 358 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 MAP3K14Q99558 947 aa16.13■□□□□ 0.17
PTPRN-210ENST00000460801 MKRN1Q9UHC7 482 aaKnown RBP16.13■□□□□ 0.17
PTPRN-210ENST00000460801 KLRG2A4D1S0 409 aaPredicted RBP16.12■□□□□ 0.17
PTPRN-210ENST00000460801 PPP6R2O75170 966 aa16.12■□□□□ 0.17
PTPRN-210ENST00000460801 PTMAP06454 111 aaKnown RBP16.12■□□□□ 0.17
PTPRN-210ENST00000460801 CMA1P23946 247 aa16.12■□□□□ 0.17
PTPRN-210ENST00000460801 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
PTPRN-210ENST00000460801 IFIT1BQ5T764 474 aaKnown RBP16.12■□□□□ 0.17
PTPRN-210ENST00000460801 CMTR1Q8N1G2 835 aaKnown RBP16.12■□□□□ 0.17
PTPRN-210ENST00000460801 RNF26Q9BY78 433 aaPredicted RBP16.12■□□□□ 0.17
PTPRN-210ENST00000460801 SLC3A2P08195 630 aaKnown RBP16.11■□□□□ 0.17
PTPRN-210ENST00000460801 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
PTPRN-210ENST00000460801 ZNF165P49910 485 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CATIPQ7Z7H3 387 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 NOSTRINQ8IVI9 506 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CCDC82Q8N4S0 544 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 GPR101Q96P66 508 aaPredicted RBP16.11■□□□□ 0.17
PTPRN-210ENST00000460801 DNAJC25Q9H1X3 360 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 MYH6P13533 1939 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 ZNF500O60304 480 aaPredicted RBP16.11■□□□□ 0.17
PTPRN-210ENST00000460801 WDHD1O75717 1129 aaPredicted RBP16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CALM1P0DP23 149 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CALM2P0DP24 149 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CALM3P0DP25 149 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CYP2D6P10635 497 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 PPP4CP60510 307 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 GSTO1P78417 241 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 FUT2Q10981 343 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 TROAPQ12815 778 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CRAMP1Q96RY5 1269 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 FOXP1Q9H334 677 aaPredicted RBP16.11■□□□□ 0.17
PTPRN-210ENST00000460801 CD209Q9NNX6 404 aa16.11■□□□□ 0.17
PTPRN-210ENST00000460801 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.11■□□□□ 0.17
PTPRN-210ENST00000460801 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 DDAH1O94760 285 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 UFL1O94874 794 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 IL1R1P14778 569 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 SAFBQ15424 915 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPRN-210ENST00000460801 GRIK5Q16478 980 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 STX1AQ16623 288 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 DIS3L2Q8IYB7 885 aaKnown RBP16.1■□□□□ 0.17
PTPRN-210ENST00000460801 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
PTPRN-210ENST00000460801 GGA1Q9UJY5 639 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms