RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 IFIT1BQ5T764 474 aaKnown RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 IFFO2Q5TF58 517 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 CTR9Q6PD62 1173 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 FOXP4Q8IVH2 680 aaPredicted RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 MAPKAPK5Q8IW41 473 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 RASEFQ8IZ41 740 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 CTCFLQ8NI51 663 aaPredicted RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 SH3RF3Q8TEJ3 882 aaPredicted RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 BRF1Q92994 677 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 IL17RAQ96F46 866 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZNF274Q96GC6 653 aaPredicted RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 TMX3Q96JJ7 454 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 CCDC17Q96LX7 622 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 RIOK1Q9BRS2 568 aaKnown RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 SYT17Q9BSW7 474 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 ANP32EQ9BTT0 268 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 KAT14Q9H8E8 782 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 PI4KBQ9UBF8 816 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 ANAPC4Q9UJX5 808 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 PALD1Q9ULE6 856 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 ANGEL1Q9UNK9 670 aaKnown RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 DAGLAQ9Y4D2 1042 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 LAMB1P07942 1786 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 IRS2Q9Y4H2 1338 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 MPHOSPH10O00566 681 aaKnown RBP6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZBTB43O43298 467 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 PRKAB2O43741 272 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 ENTPD3O75355 529 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 STK3Q13188 491 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 CSPP1Q1MSJ5 1256 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 RBM26Q5T8P6 1007 aaKnown RBP6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 GPC2Q8N158 579 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 DPF2Q92785 391 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 KIF2CQ99661 725 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 SGIP1Q9BQI5 828 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 LLPHQ9BRT6 129 aaKnown RBP6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 IL25Q9H293 177 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 VEZTQ9HBM0 779 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 FOXD4L1Q9NU39 408 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 SAP30BPQ9UHR5 308 aaKnown RBP6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 SERPINB13Q9UIV8 391 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 MYH6P13533 1939 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 COL4A1P02462 1669 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 CDK5RAP2Q96SN8 1893 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 FOCADQ5VW36 1801 aa6.83□□□□□ -1.32
RNU1-88P-201ENST00000459274 GAKO14976 1311 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 WDR33Q9C0J8 1336 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 KLF18A0A0U1RQI7 1052 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 ORC4O43929 436 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 NPM3O75607 178 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 NF2P35240 595 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 LIFRP42702 1097 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 GNAQP50148 359 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 METAP2P50579 478 aaKnown RBP eCLIP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 TFAP4Q01664 338 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 CXCL9Q07325 125 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 SSRP1Q08945 709 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 TCP10Q12799 353 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 C12orf60Q5U649 245 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 LARP1BQ659C4 914 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 CDC42EP5Q6NZY7 148 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 ADGRA1Q86SQ6 560 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 NUP133Q8WUM0 1156 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 TTC14Q96N46 770 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZSCAN10Q96SZ4 725 aaPredicted RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 RBM28Q9NW13 759 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 RNF181Q9P0P0 153 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZSWIM5Q9P217 1185 aa6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 RBM27Q9P2N5 1060 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 CNOT7Q9UIV1 285 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 ISY1Q9ULR0 285 aaKnown RBP6.82□□□□□ -1.32
RNU1-88P-201ENST00000459274 FLT1P17948 1338 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 COL1A1P02452 1464 aaPredicted RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 IQCA1LA6NCM1 817 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 GOLGA8AA7E2F4 631 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 GOLGA8BA8MQT2 603 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 CHGBP05060 677 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 CPA1P15085 419 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 RCAN1P53805 252 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 EXOSC10Q01780 885 aaKnown RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 APOBRQ0VD83 1088 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 SAFBQ15424 915 aaKnown RBP eCLIP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 CERKLQ49MI3 558 aaPredicted RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 FKBP1CQ5VVH2 108 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 DCAF15Q66K64 600 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 ILDR2Q71H61 639 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 CHST3Q7LGC8 479 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 DGKHQ86XP1 1220 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 APOBEC3FQ8IUX4 373 aaKnown RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 CCDC83Q8IWF9 413 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 FBXL16Q8N461 479 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 NLGN2Q8NFZ4 835 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 DCPSQ96C86 337 aaKnown RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 TCEANC2Q96MN5 208 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 IDI2Q9BXS1 227 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 OSBPL5Q9H0X9 879 aaPredicted RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 SH2D4AQ9H788 454 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 TDRD3Q9H7E2 651 aaKnown RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 BRMS1Q9HCU9 246 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms