RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 RARSP54136 660 aaKnown RBP12.89□□□□□ -0.35
HDLBP-227ENST00000458564 GSTO1P78417 241 aa12.89□□□□□ -0.35
HDLBP-227ENST00000458564 TREML2Q5T2D2 321 aa12.89□□□□□ -0.35
HDLBP-227ENST00000458564 ANKRD13CQ8N6S4 541 aa12.89□□□□□ -0.35
HDLBP-227ENST00000458564 NSUN4Q96CB9 384 aaKnown RBP12.89□□□□□ -0.35
HDLBP-227ENST00000458564 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
HDLBP-227ENST00000458564 HMG20BQ9P0W2 317 aa12.89□□□□□ -0.35
HDLBP-227ENST00000458564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-227ENST00000458564 LDHCP07864 332 aa12.88□□□□□ -0.35
HDLBP-227ENST00000458564 GCLCP48506 637 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-227ENST00000458564 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-227ENST00000458564 SPATA5Q8NB90 893 aa12.88□□□□□ -0.35
HDLBP-227ENST00000458564 ZNF280CQ8ND82 737 aa12.88□□□□□ -0.35
HDLBP-227ENST00000458564 COA7Q96BR5 231 aa12.88□□□□□ -0.35
HDLBP-227ENST00000458564 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.351e-17■■□□□ 11.9
HDLBP-227ENST00000458564 COL6A3P12111 3177 aa12.87□□□□□ -0.35
HDLBP-227ENST00000458564 FAM196BA6NMK8 535 aa12.87□□□□□ -0.35
HDLBP-227ENST00000458564 CAP2P40123 477 aa12.87□□□□□ -0.35
HDLBP-227ENST00000458564 SPP2Q13103 211 aa12.87□□□□□ -0.35
HDLBP-227ENST00000458564 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDLBP-227ENST00000458564 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
HDLBP-227ENST00000458564 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
HDLBP-227ENST00000458564 DEFB118Q96PH6 123 aa12.87□□□□□ -0.35
HDLBP-227ENST00000458564 HERC5Q9UII4 1024 aaKnown RBP12.87□□□□□ -0.35
HDLBP-227ENST00000458564 HMGCRP04035 888 aa12.86□□□□□ -0.35
HDLBP-227ENST00000458564 MCAMP43121 646 aa12.86□□□□□ -0.35
HDLBP-227ENST00000458564 ANKLE1Q8NAG6 615 aa12.86□□□□□ -0.35
HDLBP-227ENST00000458564 NEUROD6Q96NK8 337 aa12.86□□□□□ -0.35
HDLBP-227ENST00000458564 DOCK3Q8IZD9 2030 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 USP17L5A8MUK1 530 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 EVI5O60447 810 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 IGSF3O75054 1194 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 TFRCP02786 760 aaKnown RBP12.85□□□□□ -0.35
HDLBP-227ENST00000458564 GNAI2P04899 355 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 UQCRFS1P1P0C7P4 283 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 TRIM27P14373 513 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 HMGCS2P54868 508 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 RRP1BQ14684 758 aaKnown RBP12.85□□□□□ -0.35
HDLBP-227ENST00000458564 GORABQ5T7V8 394 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 TBC1D9Q6ZT07 1266 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 METTL16Q86W50 562 aaKnown RBP12.85□□□□□ -0.35
HDLBP-227ENST00000458564 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 WDR18Q9BV38 432 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.85□□□□□ -0.352e-10■■□□□ 13.3
HDLBP-227ENST00000458564 ASCC2Q9H1I8 757 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-227ENST00000458564 DHX36Q9H2U1 1008 aaKnown RBP12.85□□□□□ -0.35
HDLBP-227ENST00000458564 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 RAI14Q9P0K7 980 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 MORF4L1Q9UBU8 362 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 GJD2Q9UKL4 321 aa12.85□□□□□ -0.35
HDLBP-227ENST00000458564 MAST2Q6P0Q8 1798 aa12.84□□□□□ -0.35
HDLBP-227ENST00000458564 ATAD5Q96QE3 1844 aa12.84□□□□□ -0.35
HDLBP-227ENST00000458564 PNMA6EA0A0J9YXQ4 647 aa12.84□□□□□ -0.35
HDLBP-227ENST00000458564 ASNSP08243 561 aa12.84□□□□□ -0.35
HDLBP-227ENST00000458564 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
HDLBP-227ENST00000458564 SIPA1L1O43166 1804 aa12.83□□□□□ -0.35
HDLBP-227ENST00000458564 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
HDLBP-227ENST00000458564 PLCG2P16885 1265 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-227ENST00000458564 PPP4CP60510 307 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 NECAB2Q7Z6G3 386 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-227ENST00000458564 PAWRQ96IZ0 340 aaKnown RBP12.83□□□□□ -0.36
HDLBP-227ENST00000458564 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 RPTORQ8N122 1335 aa12.83□□□□□ -0.36
HDLBP-227ENST00000458564 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 BAG3O95817 575 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 BACE1P56817 501 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDLBP-227ENST00000458564 MTMR2Q13614 643 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 MAP3K21Q5TCX8 1036 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 DIS3LQ8TF46 1054 aaKnown RBP12.82□□□□□ -0.36
HDLBP-227ENST00000458564 ZNF512BQ96KM6 892 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-227ENST00000458564 NOL10Q9BSC4 688 aaKnown RBP12.82□□□□□ -0.36
HDLBP-227ENST00000458564 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 FLT1P17948 1338 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
HDLBP-227ENST00000458564 C19orf81C9J6K1 198 aa12.81□□□□□ -0.36
HDLBP-227ENST00000458564 XRCC5P13010 732 aaKnown RBP12.81□□□□□ -0.36
HDLBP-227ENST00000458564 BMP8BP34820 402 aa12.81□□□□□ -0.36
HDLBP-227ENST00000458564 MNX1P50219 401 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-227ENST00000458564 IRX3P78415 501 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-227ENST00000458564 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-227ENST00000458564 SOCS4Q8WXH5 440 aa12.81□□□□□ -0.36
HDLBP-227ENST00000458564 TRIB2Q92519 343 aa12.81□□□□□ -0.36
HDLBP-227ENST00000458564 HMX1Q9NP08 348 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-227ENST00000458564 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDLBP-227ENST00000458564 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
HDLBP-227ENST00000458564 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
HDLBP-227ENST00000458564 HERVK_113P62684 666 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 JAG1P78504 1218 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 POLA2Q14181 598 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 FOXP4Q8IVH2 680 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-227ENST00000458564 SSH3Q8TE77 659 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms