RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 MCAMP43121 646 aa26.46■■□□□ 1.83
CPNE1-220ENST00000458038 PABPC4Q13310 644 aaKnown RBP eCLIP26.46■■□□□ 1.83
CPNE1-220ENST00000458038 TEX11Q8IYF3 940 aa26.46■■□□□ 1.83
CPNE1-220ENST00000458038 DHX36Q9H2U1 1008 aaKnown RBP26.46■■□□□ 1.83
CPNE1-220ENST00000458038 TRIOBPQ9H2D6 2365 aa26.46■■□□□ 1.83
CPNE1-220ENST00000458038 TNPO2O14787 897 aaKnown RBP26.45■■□□□ 1.82
CPNE1-220ENST00000458038 ADCY3O60266 1144 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 CCDC158Q5M9N0 1113 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 ZKSCAN2Q63HK3 967 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 ZNF280CQ8ND82 737 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 CLUAP1Q96AJ1 413 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 COA7Q96BR5 231 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 HTATIP2Q9BUP3 242 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 PI4KBQ9UBF8 816 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 GABRQQ9UN88 632 aa26.45■■□□□ 1.82
CPNE1-220ENST00000458038 SLURP2P0DP57 97 aa26.44■■□□□ 1.82
CPNE1-220ENST00000458038 CAP2P40123 477 aa26.44■■□□□ 1.82
CPNE1-220ENST00000458038 GCLCP48506 637 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-220ENST00000458038 FLT3LGP49771 235 aa26.44■■□□□ 1.82
CPNE1-220ENST00000458038 FAM110CQ1W6H9 321 aa26.44■■□□□ 1.82
CPNE1-220ENST00000458038 USP17L5A8MUK1 530 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 H0YGN5 161 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 SPP2Q13103 211 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 POLA2Q14181 598 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 NAA16Q6N069 864 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-220ENST00000458038 UBE2Q1Q7Z7E8 422 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 SSH3Q8TE77 659 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 DPF3Q92784 378 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 AS3MTQ9HBK9 375 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 COLQQ9Y215 455 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-220ENST00000458038 ATAD5Q96QE3 1844 aa26.43■■□□□ 1.82
CPNE1-220ENST00000458038 PPP4CP60510 307 aa26.42■■□□□ 1.82
CPNE1-220ENST00000458038 TTC39AQ5SRH9 613 aa26.42■■□□□ 1.82
CPNE1-220ENST00000458038 U2AF1L4Q8WU68 220 aaKnown RBP26.42■■□□□ 1.82
CPNE1-220ENST00000458038 ZNF512BQ96KM6 892 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-220ENST00000458038 TNNQ9UQP3 1299 aa26.42■■□□□ 1.82
CPNE1-220ENST00000458038 FXR1P51114 621 aaKnown RBP eCLIP26.41■■□□□ 1.82
CPNE1-220ENST00000458038 ATP8B2P98198 1209 aa26.41■■□□□ 1.82
CPNE1-220ENST00000458038 OS9Q13438 667 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-220ENST00000458038 TNNI3KQ59H18 835 aa26.41■■□□□ 1.82
CPNE1-220ENST00000458038 TMEM57Q8N5G2 664 aa26.41■■□□□ 1.82
CPNE1-220ENST00000458038 ANKRD13CQ8N6S4 541 aa26.41■■□□□ 1.82
CPNE1-220ENST00000458038 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-220ENST00000458038 FPGT-TNNI3KV9GXZ4 949 aa26.41■■□□□ 1.82
CPNE1-220ENST00000458038 LOC285556D6RIA3 1793 aa26.41■■□□□ 1.82
CPNE1-220ENST00000458038 FAM196BA6NMK8 535 aa26.4■■□□□ 1.82
CPNE1-220ENST00000458038 SGPL1O95470 568 aa26.4■■□□□ 1.82
CPNE1-220ENST00000458038 SH3D19Q5HYK7 790 aa26.4■■□□□ 1.82
CPNE1-220ENST00000458038 TREML2Q5T2D2 321 aa26.4■■□□□ 1.82
CPNE1-220ENST00000458038 CCDC84Q86UT8 332 aaPredicted RBP26.4■■□□□ 1.82
CPNE1-220ENST00000458038 SH3RF3Q8TEJ3 882 aaPredicted RBP26.4■■□□□ 1.82
CPNE1-220ENST00000458038 UNC93B1Q9H1C4 597 aa26.4■■□□□ 1.82
CPNE1-220ENST00000458038 GINM1Q9NU53 330 aa26.4■■□□□ 1.82
CPNE1-220ENST00000458038 ASNSP08243 561 aa26.39■■□□□ 1.82
CPNE1-220ENST00000458038 FOXP4Q8IVH2 680 aaPredicted RBP26.39■■□□□ 1.82
CPNE1-220ENST00000458038 WDR18Q9BV38 432 aa26.39■■□□□ 1.82
CPNE1-220ENST00000458038 NR2E3Q9Y5X4 410 aa26.39■■□□□ 1.82
CPNE1-220ENST00000458038 INHAP05111 366 aa26.38■■□□□ 1.81
CPNE1-220ENST00000458038 HMGCS2P54868 508 aa26.38■■□□□ 1.81
CPNE1-220ENST00000458038 METTL16Q86W50 562 aaKnown RBP26.38■■□□□ 1.81
CPNE1-220ENST00000458038 AATFQ9NY61 560 aaKnown RBP eCLIP26.38■■□□□ 1.81
CPNE1-220ENST00000458038 MAST2Q6P0Q8 1798 aa26.38■■□□□ 1.81
CPNE1-220ENST00000458038 SURF6O75683 361 aaKnown RBP26.37■■□□□ 1.81
CPNE1-220ENST00000458038 FARP2O94887 1054 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-220ENST00000458038 ELNP15502 786 aa26.37■■□□□ 1.81
CPNE1-220ENST00000458038 DBNDD2Q9BQY9 259 aa26.37■■□□□ 1.81
CPNE1-220ENST00000458038 SNRKQ9NRH2 765 aa26.37■■□□□ 1.81
CPNE1-220ENST00000458038 NOP58Q9Y2X3 529 aaKnown RBP26.37■■□□□ 1.81
CPNE1-220ENST00000458038 CERS3Q8IU89 383 aa26.36■■□□□ 1.81
CPNE1-220ENST00000458038 FTSJ3Q8IY81 847 aaKnown RBP26.36■■□□□ 1.81
CPNE1-220ENST00000458038 TRIM34Q9BYJ4 488 aa26.36■■□□□ 1.81
CPNE1-220ENST00000458038 ASCC2Q9H1I8 757 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-220ENST00000458038 RANBP2P49792 3224 aaKnown RBP26.36■■□□□ 1.81
CPNE1-220ENST00000458038 FOCADQ5VW36 1801 aa26.35■■□□□ 1.81
CPNE1-220ENST00000458038 CYP2E1P05181 493 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-220ENST00000458038 TMED8Q6PL24 325 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-220ENST00000458038 TGFBRAP1Q8WUH2 860 aa26.35■■□□□ 1.81
CPNE1-220ENST00000458038 PAK6Q9NQU5 681 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-220ENST00000458038 CDK5RAP2Q96SN8 1893 aa26.34■■□□□ 1.81
CPNE1-220ENST00000458038 C19orf81C9J6K1 198 aa26.34■■□□□ 1.81
CPNE1-220ENST00000458038 TFRCP02786 760 aaKnown RBP26.34■■□□□ 1.81
CPNE1-220ENST00000458038 BACE1P56817 501 aa26.34■■□□□ 1.81
CPNE1-220ENST00000458038 RRP1BQ14684 758 aaKnown RBP26.34■■□□□ 1.81
CPNE1-220ENST00000458038 CRACR2BQ8N4Y2 399 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-220ENST00000458038 TMOD4Q9NZQ9 345 aa26.34■■□□□ 1.81
CPNE1-220ENST00000458038 HOXA7P31268 230 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-220ENST00000458038 DEFB118Q96PH6 123 aa26.33■■□□□ 1.81
CPNE1-220ENST00000458038 MORF4L1Q9UBU8 362 aa26.33■■□□□ 1.81
CPNE1-220ENST00000458038 FLT1P17948 1338 aa26.33■■□□□ 1.81
CPNE1-220ENST00000458038 MYO5AQ9Y4I1 1855 aaKnown RBP26.32■■□□□ 1.8
CPNE1-220ENST00000458038 HLA-DOAP06340 250 aa26.32■■□□□ 1.8
CPNE1-220ENST00000458038 IRX3P78415 501 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-220ENST00000458038 MAPKAPK5Q8IW41 473 aa26.32■■□□□ 1.8
CPNE1-220ENST00000458038 CRISPLD2Q9H0B8 497 aa26.32■■□□□ 1.8
CPNE1-220ENST00000458038 TAOK2Q9UL54 1235 aa26.32■■□□□ 1.8
CPNE1-220ENST00000458038 SIPA1L1O43166 1804 aa26.32■■□□□ 1.8
CPNE1-220ENST00000458038 USP17L10C9JJH3 530 aa26.31■■□□□ 1.8
CPNE1-220ENST00000458038 ZBTB7BO15156 539 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-220ENST00000458038 HMGCRP04035 888 aa26.31■■□□□ 1.8
CPNE1-220ENST00000458038 ZAP70P43403 619 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms