RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 RRP1BQ14684 758 aaKnown RBP23.04■■□□□ 1.28
COL20A1-204ENST00000455906 TREML2Q5T2D2 321 aa23.04■■□□□ 1.28
COL20A1-204ENST00000455906 TEX11Q8IYF3 940 aa23.04■■□□□ 1.28
COL20A1-204ENST00000455906 SH3RF3Q8TEJ3 882 aaPredicted RBP23.04■■□□□ 1.28
COL20A1-204ENST00000455906 SNRKQ9NRH2 765 aa23.04■■□□□ 1.28
COL20A1-204ENST00000455906 CCL5P13501 91 aa23.03■■□□□ 1.28
COL20A1-204ENST00000455906 ATP8B2P98198 1209 aa23.03■■□□□ 1.28
COL20A1-204ENST00000455906 DBNDD2Q9BQY9 259 aa23.03■■□□□ 1.28
COL20A1-204ENST00000455906 RANBP2P49792 3224 aaKnown RBP23.03■■□□□ 1.28
COL20A1-204ENST00000455906 FOCADQ5VW36 1801 aa23.03■■□□□ 1.28
COL20A1-204ENST00000455906 GJB1P08034 283 aa23.02■■□□□ 1.28
COL20A1-204ENST00000455906 SLAIN1Q8ND83 568 aa23.02■■□□□ 1.28
COL20A1-204ENST00000455906 SMCR8Q8TEV9 937 aaPredicted RBP23.02■■□□□ 1.28
COL20A1-204ENST00000455906 C1orf115Q9H7X2 142 aa23.02■■□□□ 1.28
COL20A1-204ENST00000455906 CAP2P40123 477 aa23.01■■□□□ 1.27
COL20A1-204ENST00000455906 GJA8P48165 433 aa23.01■■□□□ 1.27
COL20A1-204ENST00000455906 FLT3LGP49771 235 aa23.01■■□□□ 1.27
COL20A1-204ENST00000455906 SPP2Q13103 211 aa23.01■■□□□ 1.27
COL20A1-204ENST00000455906 TTC39AQ5SRH9 613 aa23.01■■□□□ 1.27
COL20A1-204ENST00000455906 UBE2Q1Q7Z7E8 422 aa23.01■■□□□ 1.27
COL20A1-204ENST00000455906 PROCA1Q8NCQ7 364 aaPredicted RBP23.01■■□□□ 1.27
COL20A1-204ENST00000455906 ZNF280CQ8ND82 737 aa23.01■■□□□ 1.27
COL20A1-204ENST00000455906 AATFQ9NY61 560 aaKnown RBP eCLIP23.01■■□□□ 1.27
COL20A1-204ENST00000455906 CYP2E1P05181 493 aaPredicted RBP23■■□□□ 1.27
COL20A1-204ENST00000455906 PPP4CP60510 307 aa23■■□□□ 1.27
COL20A1-204ENST00000455906 UBXN2AP68543 259 aa23■■□□□ 1.27
COL20A1-204ENST00000455906 NAA16Q6N069 864 aaPredicted RBP23■■□□□ 1.27
COL20A1-204ENST00000455906 ADGRA1Q86SQ6 560 aa23■■□□□ 1.27
COL20A1-204ENST00000455906 NKX2-3Q8TAU0 364 aa23■■□□□ 1.27
COL20A1-204ENST00000455906 RNF208Q9H0X6 261 aa23■■□□□ 1.27
COL20A1-204ENST00000455906 BIN2Q9UBW5 565 aaPredicted RBP23■■□□□ 1.27
COL20A1-204ENST00000455906 HERC5Q9UII4 1024 aaKnown RBP23■■□□□ 1.27
COL20A1-204ENST00000455906 TRIOBPQ9H2D6 2365 aa23■■□□□ 1.27
COL20A1-204ENST00000455906 TNPO2O14787 897 aaKnown RBP22.99■■□□□ 1.27
COL20A1-204ENST00000455906 ADCY3O60266 1144 aa22.99■■□□□ 1.27
COL20A1-204ENST00000455906 SURF6O75683 361 aaKnown RBP22.99■■□□□ 1.27
COL20A1-204ENST00000455906 OS9Q13438 667 aaPredicted RBP22.99■■□□□ 1.27
COL20A1-204ENST00000455906 CCDC158Q5M9N0 1113 aa22.99■■□□□ 1.27
COL20A1-204ENST00000455906 ANKRD13CQ8N6S4 541 aa22.99■■□□□ 1.27
COL20A1-204ENST00000455906 ZNF512BQ96KM6 892 aaPredicted RBP22.99■■□□□ 1.27
COL20A1-204ENST00000455906 TBC1D2Q9BYX2 928 aa22.99■■□□□ 1.27
COL20A1-204ENST00000455906 NOP58Q9Y2X3 529 aaKnown RBP22.99■■□□□ 1.27
COL20A1-204ENST00000455906 H0YGN5 161 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 BAG3O95817 575 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 RLBP1P12271 317 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 HMGCS2P54868 508 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 IRF5Q13568 498 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 NOL10Q9BSC4 688 aaKnown RBP22.98■■□□□ 1.27
COL20A1-204ENST00000455906 UNC93B1Q9H1C4 597 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 DHX36Q9H2U1 1008 aaKnown RBP22.98■■□□□ 1.27
COL20A1-204ENST00000455906 PI4KBQ9UBF8 816 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 PNMA3Q9UL41 463 aa22.98■■□□□ 1.27
COL20A1-204ENST00000455906 COLQQ9Y215 455 aaPredicted RBP22.98■■□□□ 1.27
COL20A1-204ENST00000455906 SZT2Q5T011 3432 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 USP17L5A8MUK1 530 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 ZBTB7BO15156 539 aaPredicted RBP22.97■■□□□ 1.27
COL20A1-204ENST00000455906 ELNP15502 786 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 ZAP70P43403 619 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 FAM110CQ1W6H9 321 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 SH3D19Q5HYK7 790 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 PXYLP1Q8TE99 480 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 U2AF1L4Q8WU68 220 aaKnown RBP22.97■■□□□ 1.27
COL20A1-204ENST00000455906 TGFBRAP1Q8WUH2 860 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 DNAJC18Q9H819 358 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 TLR7Q9NYK1 1049 aaKnown RBP22.97■■□□□ 1.27
COL20A1-204ENST00000455906 DBNLQ9UJU6 430 aaKnown RBP22.97■■□□□ 1.27
COL20A1-204ENST00000455906 FLT1P17948 1338 aa22.97■■□□□ 1.27
COL20A1-204ENST00000455906 PLCG2P16885 1265 aa22.96■■□□□ 1.27
COL20A1-204ENST00000455906 JAG1P78504 1218 aa22.96■■□□□ 1.27
COL20A1-204ENST00000455906 HNRNPUQ00839 825 aaKnown RBP eCLIP22.96■■□□□ 1.27
COL20A1-204ENST00000455906 METTL16Q86W50 562 aaKnown RBP22.96■■□□□ 1.27
COL20A1-204ENST00000455906 MAPKAPK5Q8IW41 473 aa22.96■■□□□ 1.27
COL20A1-204ENST00000455906 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
COL20A1-204ENST00000455906 PIH1D3Q9NQM4 214 aaKnown RBP22.96■■□□□ 1.27
COL20A1-204ENST00000455906 INHAP05111 366 aa22.95■■□□□ 1.26
COL20A1-204ENST00000455906 FXR1P51114 621 aaKnown RBP eCLIP22.95■■□□□ 1.26
COL20A1-204ENST00000455906 ITPRIPQ8IWB1 547 aa22.95■■□□□ 1.26
COL20A1-204ENST00000455906 IGSF3O75054 1194 aa22.94■■□□□ 1.26
COL20A1-204ENST00000455906 GCLCP48506 637 aaPredicted RBP22.94■■□□□ 1.26
COL20A1-204ENST00000455906 COA7Q96BR5 231 aa22.94■■□□□ 1.26
COL20A1-204ENST00000455906 EAF2Q96CJ1 260 aaPredicted RBP22.94■■□□□ 1.26
COL20A1-204ENST00000455906 WDR18Q9BV38 432 aa22.94■■□□□ 1.26
COL20A1-204ENST00000455906 CCDC8Q9H0W5 538 aaPredicted RBP22.94■■□□□ 1.26
COL20A1-204ENST00000455906 ASCC2Q9H1I8 757 aaPredicted RBP22.94■■□□□ 1.26
COL20A1-204ENST00000455906 AS3MTQ9HBK9 375 aa22.94■■□□□ 1.26
COL20A1-204ENST00000455906 SGPL1O95470 568 aa22.93■■□□□ 1.26
COL20A1-204ENST00000455906 PABPC4Q13310 644 aaKnown RBP eCLIP22.93■■□□□ 1.26
COL20A1-204ENST00000455906 SHROOM1Q2M3G4 852 aaPredicted RBP22.93■■□□□ 1.26
COL20A1-204ENST00000455906 PALD1Q9ULE6 856 aa22.93■■□□□ 1.26
COL20A1-204ENST00000455906 ASNSP08243 561 aa22.92■■□□□ 1.26
COL20A1-204ENST00000455906 BACE1P56817 501 aa22.92■■□□□ 1.26
COL20A1-204ENST00000455906 DYNLL1P63167 89 aaKnown RBP22.92■■□□□ 1.26
COL20A1-204ENST00000455906 MTMR2Q13614 643 aa22.92■■□□□ 1.26
COL20A1-204ENST00000455906 FOXP4Q8IVH2 680 aaPredicted RBP22.92■■□□□ 1.26
COL20A1-204ENST00000455906 DPF3Q92784 378 aa22.92■■□□□ 1.26
COL20A1-204ENST00000455906 PLXNB2O15031 1838 aa22.92■■□□□ 1.26
COL20A1-204ENST00000455906 MYH1P12882 1939 aa22.91■■□□□ 1.26
COL20A1-204ENST00000455906 FARP2O94887 1054 aaPredicted RBP22.91■■□□□ 1.26
COL20A1-204ENST00000455906 CEP85Q6P2H3 762 aa22.91■■□□□ 1.26
COL20A1-204ENST00000455906 MIER1Q8N108 512 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms