RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 TEPSINQ96N21 525 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 RNF41Q9H4P4 317 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-205ENST00000454964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.31□□□□□ -0.6
ATXN3-205ENST00000454964 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
ATXN3-205ENST00000454964 PAPPA2Q9BXP8 1791 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 CNTNAP1P78357 1384 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 GSG1L2A8MUP6 293 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 ADM5C9JUS6 153 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 ZNF213O14771 459 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 ASNSP08243 561 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 HSPA6P17066 643 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 NFIAQ12857 509 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
ATXN3-205ENST00000454964 DEFB115Q30KQ5 88 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 CCDC178Q5BJE1 867 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 NBPF12Q5TAG4 269 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-205ENST00000454964 C12orf60Q5U649 245 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 ZNF408Q9H9D4 720 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 ZNF112Q9UJU3 913 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
ATXN3-205ENST00000454964 BAZ2AQ9UIF9 1905 aaKnown RBP11.3□□□□□ -0.6
ATXN3-205ENST00000454964 USP17L12C9JPN9 530 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 USP17L21D6R901 530 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 SGSM2O43147 1006 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 USP2O75604 605 aaPredicted RBP11.29□□□□□ -0.6
ATXN3-205ENST00000454964 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
ATXN3-205ENST00000454964 CACNB3P54284 484 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 HUNKP57058 714 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 LDLRAD1Q5T700 205 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 CST9Q5W186 159 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 SAPCD2Q86UD0 394 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
ATXN3-205ENST00000454964 FAM227BQ96M60 508 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 AS3MTQ9HBK9 375 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
ATXN3-205ENST00000454964 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 PALD1Q9ULE6 856 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
ATXN3-205ENST00000454964 ANGEL1Q9UNK9 670 aaKnown RBP11.29□□□□□ -0.6
ATXN3-205ENST00000454964 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
ATXN3-205ENST00000454964 ASTN2O75129 1339 aaPredicted RBP11.29□□□□□ -0.6
ATXN3-205ENST00000454964 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
ATXN3-205ENST00000454964 DDTLA6NHG4 134 aaPredicted RBP11.28□□□□□ -0.6
ATXN3-205ENST00000454964 M0R2C6 588 aa11.28□□□□□ -0.6
ATXN3-205ENST00000454964 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
ATXN3-205ENST00000454964 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
ATXN3-205ENST00000454964 RGMBQ6NW40 437 aa11.28□□□□□ -0.6
ATXN3-205ENST00000454964 CTR9Q6PD62 1173 aa11.28□□□□□ -0.6
ATXN3-205ENST00000454964 SDR42E1Q8WUS8 393 aa11.28□□□□□ -0.6
ATXN3-205ENST00000454964 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 MINDY4BA8MYZ0 360 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 TRAF5O00463 557 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 FGAP02671 866 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 MAP2K2P36507 400 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-205ENST00000454964 PPATQ06203 517 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 TRDNQ13061 729 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 NOGQ13253 232 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 CERKLQ49MI3 558 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-205ENST00000454964 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 ERO1BQ86YB8 467 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.61
ATXN3-205ENST00000454964 MAP4K1Q92918 833 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 WRNIP1Q96S55 665 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.61
ATXN3-205ENST00000454964 ESYT1Q9BSJ8 1104 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
ATXN3-205ENST00000454964 PRKAB2O43741 272 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 ZKSCAN1P17029 563 aaPredicted RBP11.26□□□□□ -0.61
ATXN3-205ENST00000454964 MCCP23508 829 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 CAP2P40123 477 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 PPARAQ07869 468 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 C16orf86Q6ZW13 317 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 MIGA2Q7L4E1 593 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 KRT23Q9C075 422 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
ATXN3-205ENST00000454964 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 LAMB1P07942 1786 aa11.26□□□□□ -0.61
ATXN3-205ENST00000454964 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
ATXN3-205ENST00000454964 GABPAQ06546 454 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 SREBF2Q12772 1141 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 KRT32Q14532 448 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 ABCB5Q2M3G0 1257 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 PRAMEF18Q5VWM3 479 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 TMEM179Q6ZVK1 233 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms