RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
RFTN1-207ENST00000453536 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
RFTN1-207ENST00000453536 MYCP01106 439 aaPredicted RBP17.22■□□□□ 0.35
RFTN1-207ENST00000453536 RGS19P49795 217 aa17.22■□□□□ 0.35
RFTN1-207ENST00000453536 GSTO1P78417 241 aa17.22■□□□□ 0.35
RFTN1-207ENST00000453536 OTUD7BQ6GQQ9 843 aa17.22■□□□□ 0.35
RFTN1-207ENST00000453536 HOOK2Q96ED9 719 aa17.22■□□□□ 0.35
RFTN1-207ENST00000453536 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
RFTN1-207ENST00000453536 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.35
RFTN1-207ENST00000453536 ZFYVE28Q9HCC9 887 aa17.22■□□□□ 0.35
RFTN1-207ENST00000453536 AFG3L2Q9Y4W6 797 aa17.22■□□□□ 0.35
RFTN1-207ENST00000453536 PDE4DIPQ5VU43 2346 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 RBBP6Q7Z6E9 1792 aaKnown RBP17.21■□□□□ 0.35
RFTN1-207ENST00000453536 COL2A1P02458 1487 aaPredicted RBP17.21■□□□□ 0.35
RFTN1-207ENST00000453536 POTEFA5A3E0 1075 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 PEX10O60683 326 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 LDHCP07864 332 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 TREML2Q5T2D2 321 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 TSHZ3Q63HK5 1081 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 GADL1Q6ZQY3 521 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
RFTN1-207ENST00000453536 PTPN22Q9Y2R2 807 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 PTCH2Q9Y6C5 1203 aa17.21■□□□□ 0.35
RFTN1-207ENST00000453536 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
RFTN1-207ENST00000453536 TLR2O60603 784 aa17.2■□□□□ 0.34
RFTN1-207ENST00000453536 GDF11O95390 407 aa17.2■□□□□ 0.34
RFTN1-207ENST00000453536 MLLT1Q03111 559 aaPredicted RBP17.2■□□□□ 0.34
RFTN1-207ENST00000453536 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
RFTN1-207ENST00000453536 EFCC1Q9HA90 598 aa17.2■□□□□ 0.34
RFTN1-207ENST00000453536 A0A0G2JLL6 359 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-207ENST00000453536 GOLIM4O00461 696 aa17.19■□□□□ 0.34
RFTN1-207ENST00000453536 PPP4CP60510 307 aa17.19■□□□□ 0.34
RFTN1-207ENST00000453536 PRRT2Q7Z6L0 340 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-207ENST00000453536 ANKRD23Q86SG2 305 aa17.19■□□□□ 0.34
RFTN1-207ENST00000453536 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
RFTN1-207ENST00000453536 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-207ENST00000453536 PICK1Q9NRD5 415 aa17.19■□□□□ 0.34
RFTN1-207ENST00000453536 C17orf99Q6UX52 265 aa17.18■□□□□ 0.34
RFTN1-207ENST00000453536 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
RFTN1-207ENST00000453536 BOLA2Q9H3K6 86 aa17.18■□□□□ 0.34
RFTN1-207ENST00000453536 MYH8P13535 1937 aa17.17■□□□□ 0.34
RFTN1-207ENST00000453536 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
RFTN1-207ENST00000453536 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
RFTN1-207ENST00000453536 MS4A1P11836 297 aa17.17■□□□□ 0.34
RFTN1-207ENST00000453536 LACTBP83111 547 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-207ENST00000453536 PKN2Q16513 984 aaKnown RBP17.17■□□□□ 0.34
RFTN1-207ENST00000453536 SH3TC2Q8TF17 1288 aa17.17■□□□□ 0.34
RFTN1-207ENST00000453536 TRIM47Q96LD4 638 aa17.17■□□□□ 0.34
RFTN1-207ENST00000453536 RIOK1Q9BRS2 568 aaKnown RBP17.17■□□□□ 0.34
RFTN1-207ENST00000453536 TBC1D12O60347 775 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 CYP2D6P10635 497 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 PDE6AP16499 860 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 CAP2P40123 477 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 HMGCS2P54868 508 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 SPP2Q13103 211 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 CLASRPQ8N2M8 674 aaKnown RBP17.16■□□□□ 0.34
RFTN1-207ENST00000453536 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
RFTN1-207ENST00000453536 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
RFTN1-207ENST00000453536 PLXNB2O15031 1838 aa17.15■□□□□ 0.34
RFTN1-207ENST00000453536 TCRBV5S4A2TA0A5A2 114 aa17.15■□□□□ 0.34
RFTN1-207ENST00000453536 CXCL11O14625 94 aa17.15■□□□□ 0.34
RFTN1-207ENST00000453536 BAG3O95817 575 aa17.15■□□□□ 0.34
RFTN1-207ENST00000453536 IFIT2P09913 472 aaKnown RBP17.15■□□□□ 0.34
RFTN1-207ENST00000453536 LCORLQ8N3X6 602 aa17.15■□□□□ 0.34
RFTN1-207ENST00000453536 SDR42E1Q8WUS8 393 aa17.15■□□□□ 0.34
RFTN1-207ENST00000453536 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
RFTN1-207ENST00000453536 PRKAB2O43741 272 aa17.14■□□□□ 0.33
RFTN1-207ENST00000453536 HMMRO75330 724 aa17.14■□□□□ 0.33
RFTN1-207ENST00000453536 BCRP11274 1271 aa17.14■□□□□ 0.33
RFTN1-207ENST00000453536 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
RFTN1-207ENST00000453536 GABRQQ9UN88 632 aa17.14■□□□□ 0.33
RFTN1-207ENST00000453536 OSBPP22059 807 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 PSMC4P43686 418 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 USP5P45974 858 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 PLCD1P51178 756 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 MTMR2Q13614 643 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 ARMT1Q9H993 441 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
RFTN1-207ENST00000453536 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
RFTN1-207ENST00000453536 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
RFTN1-207ENST00000453536 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
RFTN1-207ENST00000453536 MAP3K12Q12852 859 aa17.12■□□□□ 0.33
RFTN1-207ENST00000453536 CRACR2BQ8N4Y2 399 aaPredicted RBP17.12■□□□□ 0.33
RFTN1-207ENST00000453536 SLC44A5Q8NCS7 719 aa17.12■□□□□ 0.33
RFTN1-207ENST00000453536 ZCCHC17Q9NP64 241 aaKnown RBP17.12■□□□□ 0.33
RFTN1-207ENST00000453536 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
RFTN1-207ENST00000453536 PRKCZQ05513 592 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 MTFR1Q15390 333 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
RFTN1-207ENST00000453536 POTEEQ6S8J3 1075 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
RFTN1-207ENST00000453536 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 ANKRD13CQ8N6S4 541 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms