RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 MYH1P12882 1939 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 TBC1D12O60347 775 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 ELNP15502 786 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 ARID4AP29374 1257 aaPredicted RBP10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 FLT3LGP49771 235 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 TREML2Q5T2D2 321 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 TBC1D9Q6ZT07 1266 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 SPATA5Q8NB90 893 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 BIN2Q9UBW5 565 aaPredicted RBP10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
DEPDC1B-202ENST00000453022 PNMA6EA0A0J9YXQ4 647 aa10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 ADCY3O60266 1144 aa10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 TRIM27P14373 513 aa10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 MCAMP43121 646 aa10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 UBXN2AP68543 259 aa10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 RRP1BQ14684 758 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 CHRDL2Q6WN34 429 aa10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 SMCR8Q8TEV9 937 aaPredicted RBP10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 U2AF1L4Q8WU68 220 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 NEUROD6Q96NK8 337 aa10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 DDX60LQ5H9U9 1706 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-202ENST00000453022 TNPO2O14787 897 aaKnown RBP10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 INHAP05111 366 aa10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 IRF5Q13568 498 aa10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 SAMD1Q6SPF0 538 aaPredicted RBP10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 ANKRD13CQ8N6S4 541 aa10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 DPF3Q92784 378 aa10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 OSBPL5Q9H0X9 879 aaPredicted RBP10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 FRMPD3Q5JV73 1810 aa10.9□□□□□ -0.66
DEPDC1B-202ENST00000453022 FARP2O94887 1054 aaPredicted RBP10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 DSG3P32926 999 aa10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 FAM110CQ1W6H9 321 aa10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 PROCA1Q8NCQ7 364 aaPredicted RBP10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 PXYLP1Q8TE99 480 aa10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 SH3RF3Q8TEJ3 882 aaPredicted RBP10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 PRO3102Q9H379 93 aa10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 RAI14Q9P0K7 980 aa10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 RBM27Q9P2N5 1060 aaKnown RBP10.9□□□□□ -0.67
DEPDC1B-202ENST00000453022 BCAR3O75815 825 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 SGPL1O95470 568 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 MAP4K4O95819 1239 aaPredicted RBP10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 GNAI2P04899 355 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 LDHCP07864 332 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 CAP2P40123 477 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 GSTO1P78417 241 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 SPP2Q13103 211 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 GORABQ5T7V8 394 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 ZNF280CQ8ND82 737 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 HTATIP2Q9BUP3 242 aa10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 PAK6Q9NQU5 681 aaPredicted RBP10.89□□□□□ -0.67
DEPDC1B-202ENST00000453022 HMGCS2P54868 508 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 JAG1P78504 1218 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 ATF7IPQ6VMQ6 1270 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 ADGRA1Q86SQ6 560 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 TEX11Q8IYF3 940 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 CLUAP1Q96AJ1 413 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 DEFB118Q96PH6 123 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 DNAJC18Q9H819 358 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
DEPDC1B-202ENST00000453022 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 SHROOM1Q2M3G4 852 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 FRAT1Q92837 279 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 COA7Q96BR5 231 aa10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 CRISPLD2Q9H0B8 497 aa10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 ASCC2Q9H1I8 757 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 SNRKQ9NRH2 765 aa10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 LRP2BPQ9P2M1 347 aa10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 HERC5Q9UII4 1024 aaKnown RBP10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 NAV1Q8NEY1 1877 aa10.87□□□□□ -0.67
DEPDC1B-202ENST00000453022 USP17L5A8MUK1 530 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 CCER2I3L3R5 266 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 IPO8O15397 1037 aaKnown RBP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 UQCRFS1P1P0C7P4 283 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 GCLCP48506 637 aaPredicted RBP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 G3BP1Q13283 466 aaKnown RBP eCLIP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 POLA2Q14181 598 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 TNNI3KQ59H18 835 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 TMEM57Q8N5G2 664 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 DBNDD2Q9BQY9 259 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 TBC1D2Q9BYX2 928 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 AATFQ9NY61 560 aaKnown RBP eCLIP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 FPGT-TNNI3KV9GXZ4 949 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 FLT1P17948 1338 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 PEX10O60683 326 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 CYP2E1P05181 493 aaPredicted RBP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 TRIM32Q13049 653 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 MTMR2Q13614 643 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 NAA16Q6N069 864 aaPredicted RBP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 METTL16Q86W50 562 aaKnown RBP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 DIS3LQ8TF46 1054 aaKnown RBP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 GPR108Q9NPR9 543 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
DEPDC1B-202ENST00000453022 A0A0C4DFX4 3053 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms