RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
COL27A1-202ENST00000451716 KCNJ14Q9UNX9 436 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
COL27A1-202ENST00000451716 NPHP1O15259 732 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 SSRP1Q08945 709 aaKnown RBP13.97□□□□□ -0.17
COL27A1-202ENST00000451716 CHAF1AQ13111 956 aaPredicted RBP13.97□□□□□ -0.17
COL27A1-202ENST00000451716 IQCB1Q15051 598 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 NLRP3Q96P20 1036 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 RIOK1Q9BRS2 568 aaKnown RBP13.97□□□□□ -0.17
COL27A1-202ENST00000451716 NARFQ9UHQ1 456 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 BIN1O00499 593 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 CTAGE5O15320 804 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 NOLC1Q14978 699 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL27A1-202ENST00000451716 STX1AQ16623 288 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 AXDND1Q5T1B0 1012 aaPredicted RBP13.97□□□□□ -0.17
COL27A1-202ENST00000451716 TXNRD3Q86VQ6 643 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 UTRNP46939 3433 aa13.97□□□□□ -0.17
COL27A1-202ENST00000451716 ERICH2A1L162 156 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 RPS6KA4O75676 772 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 ZNF75DP51815 510 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 TRIM29Q14134 588 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 RTN1Q16799 776 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 SLC4A8Q2Y0W8 1093 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 CCDC186Q7Z3E2 898 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 PIBF1Q8WXW3 757 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 ARHGEF1Q92888 912 aaKnown RBP13.96□□□□□ -0.17
COL27A1-202ENST00000451716 CLIC6Q96NY7 704 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 USP21Q9UK80 565 aa13.96□□□□□ -0.17
COL27A1-202ENST00000451716 A0A1W2PQ27 194 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 A0A1W2PQ64 194 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 A0A1W2PQD8 194 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 GOLGA6L19H0YKK7 550 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 LRMPQ12912 555 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 SART3Q15020 963 aaKnown RBP13.96□□□□□ -0.18
COL27A1-202ENST00000451716 ISM2Q6H9L7 571 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 UBAC1Q9BSL1 405 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 CHD4Q14839 1912 aa13.96□□□□□ -0.18
COL27A1-202ENST00000451716 UQCRHLA0A096LP55 91 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 BTBD18B2RXH4 712 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 ZNF202O95125 648 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 UQCRHP07919 91 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 PFKFB1P16118 471 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 SLC39A14Q15043 492 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 BCORQ6W2J9 1755 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 BECN2A8MW95 431 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
COL27A1-202ENST00000451716 PRDX5P30044 214 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL27A1-202ENST00000451716 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL27A1-202ENST00000451716 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
COL27A1-202ENST00000451716 LAMB2P55268 1798 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 CICQ96RK0 1608 aaPredicted RBP13.95□□□□□ -0.18
COL27A1-202ENST00000451716 TNKSO95271 1327 aa13.95□□□□□ -0.18
COL27A1-202ENST00000451716 IFNAR1P17181 557 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 PLA2G4DQ86XP0 818 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 DHX40Q8IX18 779 aaKnown RBP13.94□□□□□ -0.18
COL27A1-202ENST00000451716 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 RNF41Q9H4P4 317 aaPredicted RBP13.94□□□□□ -0.18
COL27A1-202ENST00000451716 CBX1P83916 185 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 MECOMQ03112 1051 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 DPCR1Q3MIW9 517 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 SPECC1Q5M775 1068 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 TPTE2Q6XPS3 522 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 FBXO33Q7Z6M2 555 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 ANO10Q9NW15 660 aa13.94□□□□□ -0.18
COL27A1-202ENST00000451716 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
COL27A1-202ENST00000451716 GOLGA6L6A8MZA4 724 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 USP17L21D6R901 530 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 ATP2B1P20020 1258 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 SLC20A2Q08357 652 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 PTPAQ15257 358 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 MAP3K14Q99558 947 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 NYXQ9GZU5 481 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 KIAA1468Q9P260 1216 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 CLIP2Q9UDT6 1046 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 U2AF2P26368 475 aaKnown RBP eCLIP13.93□□□□□ -0.189e-16■■■□□ 14.8
COL27A1-202ENST00000451716 HIBADHP31937 336 aaKnown RBP13.93□□□□□ -0.18
COL27A1-202ENST00000451716 NR5A1Q13285 461 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 SHC4Q6S5L8 630 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
COL27A1-202ENST00000451716 CMA1P23946 247 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 CCDC144BQ3MJ40 725 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 NBPF11Q86T75 865 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 DIS3L2Q8IYB7 885 aaKnown RBP13.93□□□□□ -0.18
COL27A1-202ENST00000451716 TRIM22Q8IYM9 498 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 CRACR2BQ8N4Y2 399 aaPredicted RBP13.93□□□□□ -0.18
COL27A1-202ENST00000451716 ENAHQ8N8S7 591 aaPredicted RBP13.93□□□□□ -0.18
COL27A1-202ENST00000451716 ESR2Q92731 530 aa13.93□□□□□ -0.18
COL27A1-202ENST00000451716 CACNA1SQ13698 1873 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 NMT2O60551 498 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 SLC3A2P08195 630 aaKnown RBP13.92□□□□□ -0.18
COL27A1-202ENST00000451716 RC3H1Q5TC82 1133 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms