RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 RNF41Q9H4P4 317 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-202ENST00000450991 GAKO14976 1311 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 KLF18A0A0U1RQI7 1052 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 GOLGA6L22H0YM25 854 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 KDM4AO75164 1064 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 PDCP20941 246 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 IARSP41252 1262 aaKnown RBP9.7□□□□□ -0.86
NECAP1-202ENST00000450991 RHBDL3P58872 404 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 CCT2P78371 535 aaKnown RBP9.7□□□□□ -0.86
NECAP1-202ENST00000450991 SBK1Q52WX2 424 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 SOGA3Q5TF21 947 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 LARP1BQ659C4 914 aaKnown RBP9.7□□□□□ -0.86
NECAP1-202ENST00000450991 RAB11FIP4Q86YS3 637 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 MTA3Q9BTC8 594 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 FHDC1Q9C0D6 1143 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-202ENST00000450991 LY9Q9HBG7 655 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 NCOA5Q9HCD5 579 aaKnown RBP9.7□□□□□ -0.86
NECAP1-202ENST00000450991 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
NECAP1-202ENST00000450991 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
NECAP1-202ENST00000450991 FER1L6Q2WGJ9 1857 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 PSMD14O00487 310 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 LIFRP42702 1097 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 RBM5P52756 815 aaKnown RBP eCLIP9.69□□□□□ -0.86
NECAP1-202ENST00000450991 PICALMQ13492 652 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 SGMS1Q86VZ5 419 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 SLF2Q8IX21 1173 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 NIM1KQ8IY84 436 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 FAM163AQ96GL9 167 aaPredicted RBP9.69□□□□□ -0.86
NECAP1-202ENST00000450991 SENP2Q9HC62 589 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 SUGT1Q9Y2Z0 365 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 ZBTB12Q9Y330 459 aaPredicted RBP9.69□□□□□ -0.86
NECAP1-202ENST00000450991 NID2Q14112 1375 aa9.69□□□□□ -0.86
NECAP1-202ENST00000450991 PCP11498 1178 aaKnown RBP9.68□□□□□ -0.86
NECAP1-202ENST00000450991 CRKP46108 304 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 TEKT1Q969V4 418 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 CHMP4CQ96CF2 233 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 ZKSCAN3Q9BRR0 538 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 PTPDC1A2A3K4 754 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 GOLGA8BA8MQT2 603 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 PPFIA3O75145 1194 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 CACNB3P54284 484 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
NECAP1-202ENST00000450991 SKOR2Q2VWA4 1001 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-202ENST00000450991 APOBEC3HQ6NTF7 200 aaKnown RBP9.68□□□□□ -0.86
NECAP1-202ENST00000450991 CDC37L1Q7L3B6 337 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 CERS3Q8IU89 383 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 DYNLL2Q96FJ2 89 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 ARPP21Q9UBL0 812 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-202ENST00000450991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.68□□□□□ -0.86
NECAP1-202ENST00000450991 ROBO3Q96MS0 1386 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 SIPA1L1O43166 1804 aa9.68□□□□□ -0.86
NECAP1-202ENST00000450991 VPS37CA5D8V6 355 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-202ENST00000450991 PLCD1P51178 756 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 PRELPP51888 382 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 TMEM67Q5HYA8 995 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 APOA5Q6Q788 366 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 USP40Q9NVE5 1235 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 FLT1P17948 1338 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 IFIT3O14879 490 aaKnown RBP9.67□□□□□ -0.86
NECAP1-202ENST00000450991 ORC4O43929 436 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 RANBP6O60518 1105 aaKnown RBP9.67□□□□□ -0.86
NECAP1-202ENST00000450991 GSE1Q14687 1217 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 CDC42EP5Q6NZY7 148 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 SLC44A5Q8NCS7 719 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 DDX11Q96FC9 970 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 DDX4Q9NQI0 724 aaKnown RBP9.67□□□□□ -0.86
NECAP1-202ENST00000450991 ZNRF3Q9ULT6 936 aa9.67□□□□□ -0.86
NECAP1-202ENST00000450991 WDHD1O75717 1129 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 POLR3DP05423 398 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 FDPSP14324 419 aaKnown RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 PLCG2P16885 1265 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 RXRAP19793 462 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 NFIAQ12857 509 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 SEC23AQ15436 765 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 FAM47AQ5JRC9 791 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 C12orf60Q5U649 245 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 RSBN1LQ6PCB5 846 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 HHIPL2Q6UWX4 724 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 TMEM87AQ8NBN3 555 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 ESR2Q92731 530 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 ATP6V1DQ9Y5K8 247 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 DHX16O60231 1041 aaKnown RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 PRPF40AO75400 957 aaKnown RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 FKBP1AP62942 108 aaKnown RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 CXCL9Q07325 125 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 KLHL40Q2TBA0 621 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 JDP2Q8WYK2 163 aa9.66□□□□□ -0.86
NECAP1-202ENST00000450991 GREB1LQ9C091 1923 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-202ENST00000450991 SHTN1A0MZ66 631 aa9.65□□□□□ -0.86
NECAP1-202ENST00000450991 ZBTB43O43298 467 aa9.65□□□□□ -0.86
NECAP1-202ENST00000450991 VIL1P09327 827 aaKnown RBP9.65□□□□□ -0.86
NECAP1-202ENST00000450991 SLURP2P0DP57 97 aa9.65□□□□□ -0.86
NECAP1-202ENST00000450991 METAP2P50579 478 aaKnown RBP eCLIP9.65□□□□□ -0.86
NECAP1-202ENST00000450991 TCP10Q12799 353 aa9.65□□□□□ -0.86
NECAP1-202ENST00000450991 WTAPQ15007 396 aa9.65□□□□□ -0.86
NECAP1-202ENST00000450991 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
NECAP1-202ENST00000450991 FOXD4L6Q3SYB3 417 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-202ENST00000450991 CFAP100Q494V2 611 aa9.65□□□□□ -0.86
NECAP1-202ENST00000450991 FOXD4L3Q6VB84 417 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms