RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
HLA-DRB9-201ENST00000449413 STAG1Q8WVM7 1258 aa15.06■□□□□ 0
HLA-DRB9-201ENST00000449413 HHIPL1Q96JK4 782 aa15.06■□□□□ 0
HLA-DRB9-201ENST00000449413 PCDHAC2Q9Y5I4 1007 aa15.06■□□□□ 0
HLA-DRB9-201ENST00000449413 CYP2D7A0A087X1C5 515 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 K7ELQ4 463 aaPredicted RBP15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 USP17L8P0C7I0 530 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 CTDSPL2Q05D32 466 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 COL9A3Q14050 684 aaPredicted RBP15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 SBK1Q52WX2 424 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 CDC42EP5Q6NZY7 148 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 CTR9Q6PD62 1173 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 SAPCD2Q86UD0 394 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 AMOTL1Q8IY63 956 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 OGFOD1Q8N543 542 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 MCM9Q9NXL9 1143 aa15.05■□□□□ -0
HLA-DRB9-201ENST00000449413 GREB1LQ9C091 1923 aaPredicted RBP15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 MINDY4BA8MYZ0 360 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 USP17L12C9JPN9 530 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 USP17L21D6R901 530 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 TRAF5O00463 557 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 WDHD1O75717 1129 aaPredicted RBP15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 SPDYE6P0CI01 402 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 EPS15P42566 896 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 AKNAD1Q5T1N1 836 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 PRPF38BQ5VTL8 546 aaKnown RBP15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 MB21D2Q8IYB1 491 aaPredicted RBP15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 NCOA7Q8NI08 942 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 RNF41Q9H4P4 317 aaPredicted RBP15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 CNNM2Q9H8M5 875 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 PDRG1Q9NUG6 133 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 USP40Q9NVE5 1235 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 GJA3Q9Y6H8 435 aa15.04■□□□□ -0
HLA-DRB9-201ENST00000449413 WDR19Q8NEZ3 1342 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 CYP2D6P10635 497 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 MCM2P49736 904 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 GMPSP49915 693 aaPredicted RBP15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 MMP14P50281 582 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 AK2P54819 239 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 TRDNQ13061 729 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 PICALMQ13492 652 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 MTMR14Q8NCE2 650 aa15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 DDX4Q9NQI0 724 aaKnown RBP15.03■□□□□ -0
HLA-DRB9-201ENST00000449413 SLC3A2P08195 630 aaKnown RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 PCP11498 1178 aaKnown RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 ZNF280AP59817 542 aaPredicted RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 EVX2Q03828 476 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 DLGAP5Q15398 846 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 SLC4A8Q2Y0W8 1093 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 C12orf60Q5U649 245 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 MFSD6Q6ZSS7 791 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 NOL8Q76FK4 1167 aaKnown RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 DHX32Q7L7V1 743 aaKnown RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 TCEANC2Q96MN5 208 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 KRT23Q9C075 422 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 OSBPL5Q9H0X9 879 aaPredicted RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 ALDH8A1Q9H2A2 487 aaPredicted RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 DAXXQ9UER7 740 aaPredicted RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 SAP30BPQ9UHR5 308 aaKnown RBP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 TACC3Q9Y6A5 838 aa15.02■□□□□ -0
HLA-DRB9-201ENST00000449413 SHTN1A0MZ66 631 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 B4E1Z4 1266 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 SMIM22K7EJ46 135 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 CELF2O95319 508 aaKnown RBP15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 ANTXR2P58335 489 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 NFIAQ12857 509 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 MICALL2Q8IY33 904 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 DPF2Q92785 391 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 ZBED3Q96IU2 234 aaPredicted RBP15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 IDI2Q9BXS1 227 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 MYOZ2Q9NPC6 264 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 TMOD2Q9NZR1 351 aa15.01□□□□□ -0.01
HLA-DRB9-201ENST00000449413 ATRNL1Q5VV63 1379 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 PRC1O43663 620 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 POLR3DP05423 398 aaPredicted RBP15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 FGRP09769 529 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 MCM5P33992 734 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 SLC4A3P48751 1232 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 CACNB3P54284 484 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 EXOSC10Q01780 885 aaKnown RBP15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 TOB2Q14106 344 aaPredicted RBP15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 ANKRD1Q15327 319 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 Q6ZUG5 572 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 STK11IPQ8N1F8 1099 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 PRMT6Q96LA8 375 aaPredicted RBP15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 TDRD3Q9H7E2 651 aaKnown RBP15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 TOMM22Q9NS69 142 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 ATAD5Q96QE3 1844 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 CASP8AP2Q9UKL3 1982 aa15□□□□□ -0.01
HLA-DRB9-201ENST00000449413 ORC4O43929 436 aa14.99□□□□□ -0.01
HLA-DRB9-201ENST00000449413 KDM4AO75164 1064 aa14.99□□□□□ -0.01
HLA-DRB9-201ENST00000449413 PDE4BQ07343 736 aa14.99□□□□□ -0.01
HLA-DRB9-201ENST00000449413 NOGQ13253 232 aa14.99□□□□□ -0.01
HLA-DRB9-201ENST00000449413 RRP12Q5JTH9 1297 aaKnown RBP14.99□□□□□ -0.01
HLA-DRB9-201ENST00000449413 CYB5R4Q7L1T6 521 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms